Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040107
CDS Infomation

pacid=37427526 polypeptide=PGSC0003DMP400027196 locus=PGSC0003DMG400015516 ID=PGSC0003DMT400040107.v4.03 annot-version=v4.03
Sequence

ATGGCTAATTTCTTTTCATTAGGTGGCAGCCAAGAACAACAACATCAAGAAATTAGCAGC
AGCCAAGCAATAGTACCCACAGATCAGAGTAATAATTGGTTTTTGTACAGAAATGATCAT
CATCATAATCAAGAAATACCCAACACTTACAAAGGTTTCGAGTTATGGCAAAGTGGTAAC
ACTCCTCAACACCAACCAGAACAACAACAACAACAACCACAGTTTCGTCATCCAATTTAT
CCTTTGCAAGATCTTTATTCCACTGATGTTGGATTAGGTGTCGGGCCAAGCCGAAGTGGC
TTTGATATATCTGCAGGTGATCATGAGGCCTCGAGGTCGGGATTCGTGATGATGAGGAGT
GGTGGAGGAGGAATAAGTTGCCAAGATTGTGGGAACCAAGCTAAGAAAGATTGTCAACAT
ATGAGGTGTAGGACTTGTTGTAAGAGTAGAGGGTTTCAGTGTCAAACTCATGTGAAAAGT
ACTTGGGTTCCAGCAGCTAAAAGGAGAGAAAGGCAACAACAACTTACTGCTTTGCAGCAA
CAACAACAACAACAAGGACATAATAATAATAAGCATAAAAGGCAAAGAGAGGATCCAAGT
GCTTCTTCTCTTGTGTCTACTCGTTTGCCTTCAAACACTAATGGGTTAGAAGTGGGAAAA
TTTCCAGCAAAAGTAAGAACAAGTGCTGTATTTCAGTGTATTCAAATGAGCTCAATTGAC
GATGATGAAGATCAATTAGCATATCAAGCTGCTGTGAGCATTGGTGGACATGTGTTCAAA
GGAATTTTATATGATCAAGGTCATGAAAGTCAGTACAATAACATGGTTGCAGCCGGAGGC
GATACGTCTTCTGGTGGTAGTGCTGGAGTTCAGCACCACCACCATAATTCCGCTGCAGTG
GCTACCGCGACTACTACAAGTGGTGGTGATGGTACTGCAGCGGGTCCCTCAAATTTTCTA
GACCCTTCTTTATTTCCAGCTCCACTTAGCACTTTTATGGTAGCTGGTACGCAATTTTTT
CCACCTTCAAGATCTCCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027196
PEP Infomation

pacid=37427526 transcript=PGSC0003DMT400040107 locus=PGSC0003DMG400015516 ID=PGSC0003DMT400040107.v4.03 annot-version=v4.03
Sequence

MANFFSLGGSQEQQHQEISSSQAIVPTDQSNNWFLYRNDHHHNQEIPNTYKGFELWQSGN
TPQHQPEQQQQQPQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRSGFVMMRS
GGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLTALQQ
QQQQQGHNNNKHKRQREDPSASSLVSTRLPSNTNGLEVGKFPAKVRTSAVFQCIQMSSID
DDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGSAGVQHHHHNSAAV
ATATTTSGGDGTAAGPSNFLDPSLFPAPLSTFMVAGTQFFPPSRSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400040107
Transcript Infomation

pacid=37427526 locus=PGSC0003DMG400015516 ID=PGSC0003DMT400040107.v4.03 annot-version=v4.03
Sequence

ATGGCTAATTTCTTTTCATTAGGTGGCAGCCAAGAACAACAACATCAAGAAATTAGCAGC
AGCCAAGCAATAGTACCCACAGATCAGAGTAATAATTGGTTTTTGTACAGAAATGATCAT
CATCATAATCAAGAAATACCCAACACTTACAAAGGTTTCGAGTTATGGCAAAGTGGTAAC
ACTCCTCAACACCAACCAGAACAACAACAACAACAACCACAGTTTCGTCATCCAATTTAT
CCTTTGCAAGATCTTTATTCCACTGATGTTGGATTAGGTGTCGGGCCAAGCCGAAGTGGC
TTTGATATATCTGCAGGTGATCATGAGGCCTCGAGGTCGGGATTCGTGATGATGAGGAGT
GGTGGAGGAGGAATAAGTTGCCAAGATTGTGGGAACCAAGCTAAGAAAGATTGTCAACAT
ATGAGGTGTAGGACTTGTTGTAAGAGTAGAGGGTTTCAGTGTCAAACTCATGTGAAAAGT
ACTTGGGTTCCAGCAGCTAAAAGGAGAGAAAGGCAACAACAACTTACTGCTTTGCAGCAA
CAACAACAACAACAAGGACATAATAATAATAAGCATAAAAGGCAAAGAGAGGATCCAAGT
GCTTCTTCTCTTGTGTCTACTCGTTTGCCTTCAAACACTAATGGGTTAGAAGTGGGAAAA
TTTCCAGCAAAAGTAAGAACAAGTGCTGTATTTCAGTGTATTCAAATGAGCTCAATTGAC
GATGATGAAGATCAATTAGCATATCAAGCTGCTGTGAGCATTGGTGGACATGTGTTCAAA
GGAATTTTATATGATCAAGGTCATGAAAGTCAGTACAATAACATGGTTGCAGCCGGAGGC
GATACGTCTTCTGGTGGTAGTGCTGGAGTTCAGCACCACCACCATAATTCCGCTGCAGTG
GCTACCGCGACTACTACAAGTGGTGGTGATGGTACTGCAGCGGGTCCCTCAAATTTTCTA
GACCCTTCTTTATTTCCAGCTCCACTTAGCACTTTTATGGTAGCTGGTACGCAATTTTTT
CCACCTTCAAGATCTCCCTAA