Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040071
CDS Infomation

pacid=37427424 polypeptide=PGSC0003DMP400027169 locus=PGSC0003DMG400015501 ID=PGSC0003DMT400040071.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAACATTGCCTGATGGACCAAATGCACGCCAAAGAAGTTATCTGATTGGT
CGGTTGAGAAAGGCGGTTAAATGGGCTAGTCTTTTCCAGGAATTATGTTCCATCAAGGGA
GATTCGAGAACATCTTTAGAAGCGGAGGCTTATGCTGCATACATGAAAGGGAGTTTATTG
TTTGAAAAAGATCAAAATTGGGACGTTGCTCTAAAGTGTTTCAAAAGTGCCAGGGCTGTG
TATGAGGAACTTGGAAAATATGGAGATCTAGAGAACCAAGTATTGTGTCGTGAGCGAGTT
GAGGAACTAGAACCTAGTATCAGATATTGCTTACACAAGATTGGTGAGTCTAACTTACAA
ACTTCTGAACTCGTTTCCATCGGTGAAATTGAAGGGCCTGCACTGGACCTTTTCAAAGCG
AAGTTGGAGGCTGCTATGGCAGAGGCAAGATCTCAGCAGGCTGCATCTATGACAGAATTT
CATTGGCTTGGAAATAGATTTCCAATTTCAAATGCAAAGATACGGGTGTCCATCCTGAAA
GCCCAGGAACTGGAGAAAGATATCCATGGTTCAGCTGCTGATTCTCTTCCAGCTGAGAAG
AAACTTGTGTTATATGACAAAATATTTGCAGCATATCACGAAGCCAGGAGCTGCATCCGG
AATGACCTGGTTACGGCTGCTAATTCAGAAAATGTGAAGGATGAGTTAAGTGGACTGGAT
AAAGCCGTTGGTGCAATTTTAGGGCAGCGAACCATTGAGAGGAACCAGTTGCTAGTTAAA
ATAGCTAAAAGCAAGCTCAACAAGGTTCGTGATGATAAAAATGAAAAGGTCACGAAGCCA
GAGGAGCTTGTTCGGCTGTATGATCTACTGTTACAGAATACTGCTGATCTTTCTGATCTA
GTTAGTTCTGGAAGAGATAGAAAAGTGGAAGAAGTTGCCTTAGCTGAAGAGTGTGAGCTG
AGAAGTATGGCTTTCCGAGCAGAAAGGTGCTTCTACTTAGCAAAGTCCTACAGTTCGGCG
GGAAAGAGGACAGAAGCTTATGCCTTGTACTCTCGAGCTCGTTCTTTAGCTGATGCAGCT
CTTATGAAACTGCAGTCCGCGAATGCTGCTGATCAGGTCATGATCAAGGAACTGAGAACA
CTGTATAACGAGAGCAGATCTAACAGCTGTGCTGAGCATGCCAAAGGAATTATGGAGGAG
GAAAAGGCTCCAGAAAATCTCTCGAAAAAGATATCTAATATCTCATTGAATGGAACTGAT
AAGAAGATGGAGAAACTTCTCATGGAAAAATTGGATACATACGAATCAGCTGTTGGTGAA
GCCAACATGAAGGTTGTTCCTCGAATTGAAACATTTCCACCTGCCTTCCAACCAGTTCCT
CGTAATCCCATCGTATTGGACCTGGCCTATAACCTTATTGAGTTCCCATCACTGGACTCT
CGTATGAAGAAAGATAAGAAAGGTTTCATTAGTAGGTTTTGGGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027169
PEP Infomation

pacid=37427424 transcript=PGSC0003DMT400040071 locus=PGSC0003DMG400015501 ID=PGSC0003DMT400040071.v4.03 annot-version=v4.03
Sequence

MEKKTLPDGPNARQRSYLIGRLRKAVKWASLFQELCSIKGDSRTSLEAEAYAAYMKGSLL
FEKDQNWDVALKCFKSARAVYEELGKYGDLENQVLCRERVEELEPSIRYCLHKIGESNLQ
TSELVSIGEIEGPALDLFKAKLEAAMAEARSQQAASMTEFHWLGNRFPISNAKIRVSILK
AQELEKDIHGSAADSLPAEKKLVLYDKIFAAYHEARSCIRNDLVTAANSENVKDELSGLD
KAVGAILGQRTIERNQLLVKIAKSKLNKVRDDKNEKVTKPEELVRLYDLLLQNTADLSDL
VSSGRDRKVEEVALAEECELRSMAFRAERCFYLAKSYSSAGKRTEAYALYSRARSLADAA
LMKLQSANAADQVMIKELRTLYNESRSNSCAEHAKGIMEEEKAPENLSKKISNISLNGTD
KKMEKLLMEKLDTYESAVGEANMKVVPRIETFPPAFQPVPRNPIVLDLAYNLIEFPSLDS
RMKKDKKGFISRFWG*

Transcript Sequence

Transcript ID

PGSC0003DMT400040071
Transcript Infomation

pacid=37427424 locus=PGSC0003DMG400015501 ID=PGSC0003DMT400040071.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAAACATTGCCTGATGGACCAAATGCACGCCAAAGAAGTTATCTGATTGGT
CGGTTGAGAAAGGCGGTTAAATGGGCTAGTCTTTTCCAGGAATTATGTTCCATCAAGGGA
GATTCGAGAACATCTTTAGAAGCGGAGGCTTATGCTGCATACATGAAAGGGAGTTTATTG
TTTGAAAAAGATCAAAATTGGGACGTTGCTCTAAAGTGTTTCAAAAGTGCCAGGGCTGTG
TATGAGGAACTTGGAAAATATGGAGATCTAGAGAACCAAGTATTGTGTCGTGAGCGAGTT
GAGGAACTAGAACCTAGTATCAGATATTGCTTACACAAGATTGGTGAGTCTAACTTACAA
ACTTCTGAACTCGTTTCCATCGGTGAAATTGAAGGGCCTGCACTGGACCTTTTCAAAGCG
AAGTTGGAGGCTGCTATGGCAGAGGCAAGATCTCAGCAGGCTGCATCTATGACAGAATTT
CATTGGCTTGGAAATAGATTTCCAATTTCAAATGCAAAGATACGGGTGTCCATCCTGAAA
GCCCAGGAACTGGAGAAAGATATCCATGGTTCAGCTGCTGATTCTCTTCCAGCTGAGAAG
AAACTTGTGTTATATGACAAAATATTTGCAGCATATCACGAAGCCAGGAGCTGCATCCGG
AATGACCTGGTTACGGCTGCTAATTCAGAAAATGTGAAGGATGAGTTAAGTGGACTGGAT
AAAGCCGTTGGTGCAATTTTAGGGCAGCGAACCATTGAGAGGAACCAGTTGCTAGTTAAA
ATAGCTAAAAGCAAGCTCAACAAGGTTCGTGATGATAAAAATGAAAAGGTCACGAAGCCA
GAGGAGCTTGTTCGGCTGTATGATCTACTGTTACAGAATACTGCTGATCTTTCTGATCTA
GTTAGTTCTGGAAGAGATAGAAAAGTGGAAGAAGTTGCCTTAGCTGAAGAGTGTGAGCTG
AGAAGTATGGCTTTCCGAGCAGAAAGGTGCTTCTACTTAGCAAAGTCCTACAGTTCGGCG
GGAAAGAGGACAGAAGCTTATGCCTTGTACTCTCGAGCTCGTTCTTTAGCTGATGCAGCT
CTTATGAAACTGCAGTCCGCGAATGCTGCTGATCAGGTCATGATCAAGGAACTGAGAACA
CTGTATAACGAGAGCAGATCTAACAGCTGTGCTGAGCATGCCAAAGGAATTATGGAGGAG
GAAAAGGCTCCAGAAAATCTCTCGAAAAAGATATCTAATATCTCATTGAATGGAACTGAT
AAGAAGATGGAGAAACTTCTCATGGAAAAATTGGATACATACGAATCAGCTGTTGGTGAA
GCCAACATGAAGGTTGTTCCTCGAATTGAAACATTTCCACCTGCCTTCCAACCAGTTCCT
CGTAATCCCATCGTATTGGACCTGGCCTATAACCTTATTGAGTTCCCATCACTGGACTCT
CGTATGAAGAAAGATAAGAAAGGTTTCATTAGTAGGTTTTGGGGCTGA