Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040064
CDS Infomation

pacid=37429073 polypeptide=PGSC0003DMP400027162 locus=PGSC0003DMG400015498 ID=PGSC0003DMT400040064.v4.03 annot-version=v4.03
Sequence

ATGAATGATTGCGCGGGCTCTGGTGAAGTGAGTGTATTGTCTTCTGGTGAGCAGGCAGCT
CCTTGTAAAGAAGCAGCAAAGAAAAAACGGAATCTCCCTGGAATGCCAGATCCTAATGCG
GAAGTGGTAGCTTTGTCACCGAAAACTCTATTGGCAACGAACCGATTTGTGTGTGAAATT
TGCAACAAAGGGTTTCAGAGAGACCAGAATTTGCAGCTTCATAGAAGAGGTCACAATCTG
CCTTGGAAGCTAAGGCAGAGAGCAAGCAATGAGGTGAGGAAGAGAGTGTATGTTTGCCCC
GAACTTACGTGTGTTCACCATGATCCTTCACGGGCATTAGGGGATTTGACTGGGATCAAG
AAGCATTTTTGTAGGAAACACGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCAAAAAAG
TATGCAGTTCAGTCTGATTTGAAGGCTCATTTGAAGATTTGTGGAACTAAAGAGTATAAA
TGTGATTGTGGGACTATGTTTTCAAGGAGGGATAGCTTTATCACACACAGGGCATTTTGT
GATGTTTTAGCAAAAGATACTGAGAAAGCACAGAATGCAGTTACAACTCCTATTGCTGAT
GAGGACCATAAAGTTCAAGTTGTTGTTTCATCAACACCACAAACACCTCCTACGCCCCCA
CCATCCTTGGAGCCGCCAGCCGTTCCTTCACCAGCTGCCCTGGAGCCTCTACCACCTCCT
GTTTCTCCGTCAACTGCTGTAGTGTCTTCTGATTCTCCCATCCAGAATCCAGAGAGTCCA
CACACAAATTCCAATGGAACTATTACTAAACAGGATATAGAAGAAACAACAGCAAAATCA
AGCTTGTCTGGAATCTGCAGTAGTAGCTCATGCACCGGATGTACCAACAGCAACTGTTTT
ACAAGCTTGACTGGAATCTGCAGCAGCAGTTGGAGCTCAAGCAGTAATGGAAGTACCAGC
AGCAGCAGCATTTTTCCAAGCTTGACTGGAATCTGTGGCAGCACTAGGAGCTCGAGCAGT
AATGGAAGTACTGGCAGCATCAGCGTTTTCCCAAGCTTGTCTGGAATATGTAGCAATAGT
AGGAGCTCAAGCAGTAATGGAAGTACCCACAGCAGCAGCATATTTTCAAGTTCAACTGGA
ATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATATTT
TCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGC
GGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCA
ACTGGAATCTGTAGCGGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGT
ATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATTTTTGCAAGTTCAACTGGA
ATCTATAGCAACAGCAGTAGCTCGAGCTGTAACAGAAGTACCAGCGGCAGCAGCATTTTT
ACAAGCTTGACTGGAATCTGTAGCAGCAGTAGTAACTCGAGCAGCAACAGAAGTGCCAGC
AACAGCACTTTTGCAAGCTTATTTGCTTCATCAACAGCTTCAGGAAGTTTGCCGTCTCAA
GCACCTCAATTTACGGATTGGTTTCAGTCCGTGGCTCCTGCACCACCACCTGATATAGAA
CCACCATCATCTATGGAACCAATATCTCTCTGCCTTGCCATGAATCATAGTTCATCAGTC
TTTGGACCAGCTGGGCAAGAGAGAATTCAGTATGCTGCAGCACCACAACCATCCATGTCT
GCAACAGCATTACTGCAGAAGGCTGCTCAGATGGGTGCAACAGCGACAAACTCATCATTG
TTGAGGGGTCTTGGGATATTATCTTCTTCTTCATCATCTAGTGGGCAACACGAATGGAAT
GGGAGACAAATTGACACTGATGGTGCAACGTTGGCTGCAGGCCTTGGCCTTGGATTGCCA
TGTGATGATGGCTCTGGTCTAAAGGAACTGATGTTGGGAACTCCCTCTGTTTTCGGTCCC
AAACATCCTACTCTTGACCTTCTTGGACTGGGGATGGCAGCTGGTGGAGGCTCAACACCT
GGATTATCCGCTCTAATAACATCAATGGGCGGTAATCTAGATGTGGCTGCGGCAGCAGGA
CCGTTTGACAGTGGAGAATTTTGTGGGAAGGAGTTTGGAAGAAGTTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027162
PEP Infomation

pacid=37429073 transcript=PGSC0003DMT400040064 locus=PGSC0003DMG400015498 ID=PGSC0003DMT400040064.v4.03 annot-version=v4.03
Sequence

MNDCAGSGEVSVLSSGEQAAPCKEAAKKKRNLPGMPDPNAEVVALSPKTLLATNRFVCEI
CNKGFQRDQNLQLHRRGHNLPWKLRQRASNEVRKRVYVCPELTCVHHDPSRALGDLTGIK
KHFCRKHGEKKWKCDKCSKKYAVQSDLKAHLKICGTKEYKCDCGTMFSRRDSFITHRAFC
DVLAKDTEKAQNAVTTPIADEDHKVQVVVSSTPQTPPTPPPSLEPPAVPSPAALEPLPPP
VSPSTAVVSSDSPIQNPESPHTNSNGTITKQDIEETTAKSSLSGICSSSSCTGCTNSNCF
TSLTGICSSSWSSSSNGSTSSSSIFPSLTGICGSTRSSSSNGSTGSISVFPSLSGICSNS
RSSSSNGSTHSSSIFSSSTGICSSSIFPSSTGICSGSSIFSSSTGICSSSIFPSSTGICS
GSSIFSSSTGICSSSIFPSSTGICSGSSIFSSSTGICSSSIFPSSTGICSGSSIFASSTG
IYSNSSSSSCNRSTSGSSIFTSLTGICSSSSNSSSNRSASNSTFASLFASSTASGSLPSQ
APQFTDWFQSVAPAPPPDIEPPSSMEPISLCLAMNHSSSVFGPAGQERIQYAAAPQPSMS
ATALLQKAAQMGATATNSSLLRGLGILSSSSSSSGQHEWNGRQIDTDGATLAAGLGLGLP
CDDGSGLKELMLGTPSVFGPKHPTLDLLGLGMAAGGGSTPGLSALITSMGGNLDVAAAAG
PFDSGEFCGKEFGRSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400040064
Transcript Infomation

pacid=37429073 locus=PGSC0003DMG400015498 ID=PGSC0003DMT400040064.v4.03 annot-version=v4.03
Sequence

ATGAATGATTGCGCGGGCTCTGGTGAAGTGAGTGTATTGTCTTCTGGTGAGCAGGCAGCT
CCTTGTAAAGAAGCAGCAAAGAAAAAACGGAATCTCCCTGGAATGCCAGATCCTAATGCG
GAAGTGGTAGCTTTGTCACCGAAAACTCTATTGGCAACGAACCGATTTGTGTGTGAAATT
TGCAACAAAGGGTTTCAGAGAGACCAGAATTTGCAGCTTCATAGAAGAGGTCACAATCTG
CCTTGGAAGCTAAGGCAGAGAGCAAGCAATGAGGTGAGGAAGAGAGTGTATGTTTGCCCC
GAACTTACGTGTGTTCACCATGATCCTTCACGGGCATTAGGGGATTTGACTGGGATCAAG
AAGCATTTTTGTAGGAAACACGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCAAAAAAG
TATGCAGTTCAGTCTGATTTGAAGGCTCATTTGAAGATTTGTGGAACTAAAGAGTATAAA
TGTGATTGTGGGACTATGTTTTCAAGGAGGGATAGCTTTATCACACACAGGGCATTTTGT
GATGTTTTAGCAAAAGATACTGAGAAAGCACAGAATGCAGTTACAACTCCTATTGCTGAT
GAGGACCATAAAGTTCAAGTTGTTGTTTCATCAACACCACAAACACCTCCTACGCCCCCA
CCATCCTTGGAGCCGCCAGCCGTTCCTTCACCAGCTGCCCTGGAGCCTCTACCACCTCCT
GTTTCTCCGTCAACTGCTGTAGTGTCTTCTGATTCTCCCATCCAGAATCCAGAGAGTCCA
CACACAAATTCCAATGGAACTATTACTAAACAGGATATAGAAGAAACAACAGCAAAATCA
AGCTTGTCTGGAATCTGCAGTAGTAGCTCATGCACCGGATGTACCAACAGCAACTGTTTT
ACAAGCTTGACTGGAATCTGCAGCAGCAGTTGGAGCTCAAGCAGTAATGGAAGTACCAGC
AGCAGCAGCATTTTTCCAAGCTTGACTGGAATCTGTGGCAGCACTAGGAGCTCGAGCAGT
AATGGAAGTACTGGCAGCATCAGCGTTTTCCCAAGCTTGTCTGGAATATGTAGCAATAGT
AGGAGCTCAAGCAGTAATGGAAGTACCCACAGCAGCAGCATATTTTCAAGTTCAACTGGA
ATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATATTT
TCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCAACTGGAATCTGTAGC
GGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGTATATTTCCAAGTTCA
ACTGGAATCTGTAGCGGCAGCAGCATATTTTCAAGTTCAACTGGAATCTGTAGCAGCAGT
ATATTTCCAAGTTCAACTGGAATCTGTAGCGGCAGCAGCATTTTTGCAAGTTCAACTGGA
ATCTATAGCAACAGCAGTAGCTCGAGCTGTAACAGAAGTACCAGCGGCAGCAGCATTTTT
ACAAGCTTGACTGGAATCTGTAGCAGCAGTAGTAACTCGAGCAGCAACAGAAGTGCCAGC
AACAGCACTTTTGCAAGCTTATTTGCTTCATCAACAGCTTCAGGAAGTTTGCCGTCTCAA
GCACCTCAATTTACGGATTGGTTTCAGTCCGTGGCTCCTGCACCACCACCTGATATAGAA
CCACCATCATCTATGGAACCAATATCTCTCTGCCTTGCCATGAATCATAGTTCATCAGTC
TTTGGACCAGCTGGGCAAGAGAGAATTCAGTATGCTGCAGCACCACAACCATCCATGTCT
GCAACAGCATTACTGCAGAAGGCTGCTCAGATGGGTGCAACAGCGACAAACTCATCATTG
TTGAGGGGTCTTGGGATATTATCTTCTTCTTCATCATCTAGTGGGCAACACGAATGGAAT
GGGAGACAAATTGACACTGATGGTGCAACGTTGGCTGCAGGCCTTGGCCTTGGATTGCCA
TGTGATGATGGCTCTGGTCTAAAGGAACTGATGTTGGGAACTCCCTCTGTTTTCGGTCCC
AAACATCCTACTCTTGACCTTCTTGGACTGGGGATGGCAGCTGGTGGAGGCTCAACACCT
GGATTATCCGCTCTAATAACATCAATGGGCGGTAATCTAGATGTGGCTGCGGCAGCAGGA
CCGTTTGACAGTGGAGAATTTTGTGGGAAGGAGTTTGGAAGAAGTTCATGA