Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040062
CDS Infomation

pacid=37427602 polypeptide=PGSC0003DMP400027160 locus=PGSC0003DMG402015497 ID=PGSC0003DMT400040062.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATCAATTTTCTTCTTCATGGTTATTGTTCTCCTTGCTTTTGCACCAATTTGT
TTGTCTTCTAAGACTTATGGTGGTTATCTATTCCCACAATTTTATGACCGGTCATGTCCC
CAAGCTAAACAAATAGTCAAGTCTATTGTTGCCAAGGCCGTAGCAAAAGAGGCTCGAATG
GCTGCTTCTTTGCTGAGGCTGCATTTCCACGATTGCTTTGTCAAGGGGTGTGATGCATCT
CTGCTCCTTGACAACAGTGGAACCATAATTAGTGAGAAAAGATCAAATCCCAACAGGAAT
TCGGTTCGTGGATTTGAAGTCATTGATGAAATTAAGAAGACGTTGGAGAAGGAGTGCCCT
CAAACTGTATCATGTGCAGACATATTGGCACTAGCTGCAAGGGATTCAACAGTTTTAGCT
GGTGGACCAAACTGGGAGGTACCATTAGGAAGAAAAGACTCTAGAGGTGCCAGTTTAAGT
GGCTCCAACTATAATATCCCTGCTCCAAACAACACTTTTAATACCATTCTTACTAAATTC
AAGTTGAAGGGGCTTGATATTGTTGATCTTGTAGCTTTATCTGGGAGCCACACAATTGGA
AATGCAAGATGCACCAGCTTTAGGCAGAGACTTTACAATCAGTCAGGAAACAGTTTACCA
GACTATACACTGGAACAATCATATGCTGCCCAATTGCGCGTTAGGTGTCCAAGATCTGGT
GGTGACCAAACCTTATTTTTCATGGATTTCGTCTCCCCGATAAAATTTGACAATAGCTAC
TTTAAGAACTTGTTGGCTTCAAAGGGACTATTGAACTCAGATCAAGTTCTTGTTACTAAG
AATCAAGAATCACTAGCACTTGTGAAACAATATGCAGAGAACAATGAGCTTTTCTTTGAG
CATTTCGCAAAGTCTATGGTTAAGATGGGAAATATTTCACCTTTAACGGGTTTCAGGGGA
GAAATCAGGAAGAATTGCAGGAAGATCAACAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027160
PEP Infomation

pacid=37427602 transcript=PGSC0003DMT400040062 locus=PGSC0003DMG402015497 ID=PGSC0003DMT400040062.v4.03 annot-version=v4.03
Sequence

MAQSIFFFMVIVLLAFAPICLSSKTYGGYLFPQFYDRSCPQAKQIVKSIVAKAVAKEARM
AASLLRLHFHDCFVKGCDASLLLDNSGTIISEKRSNPNRNSVRGFEVIDEIKKTLEKECP
QTVSCADILALAARDSTVLAGGPNWEVPLGRKDSRGASLSGSNYNIPAPNNTFNTILTKF
KLKGLDIVDLVALSGSHTIGNARCTSFRQRLYNQSGNSLPDYTLEQSYAAQLRVRCPRSG
GDQTLFFMDFVSPIKFDNSYFKNLLASKGLLNSDQVLVTKNQESLALVKQYAENNELFFE
HFAKSMVKMGNISPLTGFRGEIRKNCRKINN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040062
Transcript Infomation

pacid=37427602 locus=PGSC0003DMG402015497 ID=PGSC0003DMT400040062.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATCAATTTTCTTCTTCATGGTTATTGTTCTCCTTGCTTTTGCACCAATTTGT
TTGTCTTCTAAGACTTATGGTGGTTATCTATTCCCACAATTTTATGACCGGTCATGTCCC
CAAGCTAAACAAATAGTCAAGTCTATTGTTGCCAAGGCCGTAGCAAAAGAGGCTCGAATG
GCTGCTTCTTTGCTGAGGCTGCATTTCCACGATTGCTTTGTCAAGGGGTGTGATGCATCT
CTGCTCCTTGACAACAGTGGAACCATAATTAGTGAGAAAAGATCAAATCCCAACAGGAAT
TCGGTTCGTGGATTTGAAGTCATTGATGAAATTAAGAAGACGTTGGAGAAGGAGTGCCCT
CAAACTGTATCATGTGCAGACATATTGGCACTAGCTGCAAGGGATTCAACAGTTTTAGCT
GGTGGACCAAACTGGGAGGTACCATTAGGAAGAAAAGACTCTAGAGGTGCCAGTTTAAGT
GGCTCCAACTATAATATCCCTGCTCCAAACAACACTTTTAATACCATTCTTACTAAATTC
AAGTTGAAGGGGCTTGATATTGTTGATCTTGTAGCTTTATCTGGGAGCCACACAATTGGA
AATGCAAGATGCACCAGCTTTAGGCAGAGACTTTACAATCAGTCAGGAAACAGTTTACCA
GACTATACACTGGAACAATCATATGCTGCCCAATTGCGCGTTAGGTGTCCAAGATCTGGT
GGTGACCAAACCTTATTTTTCATGGATTTCGTCTCCCCGATAAAATTTGACAATAGCTAC
TTTAAGAACTTGTTGGCTTCAAAGGGACTATTGAACTCAGATCAAGTTCTTGTTACTAAG
AATCAAGAATCACTAGCACTTGTGAAACAATATGCAGAGAACAATGAGCTTTTCTTTGAG
CATTTCGCAAAGTCTATGGTTAAGATGGGAAATATTTCACCTTTAACGGGTTTCAGGGGA
GAAATCAGGAAGAATTGCAGGAAGATCAACAATTAA