Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040010
CDS Infomation

pacid=37427696 polypeptide=PGSC0003DMP400027121 locus=PGSC0003DMG400015476 ID=PGSC0003DMT400040010.v4.03 annot-version=v4.03
Sequence

ATGGATTCATCTCCTGGAACTGCTTCCTCCAATGATACTGATTCTAAAGAAACCCCTTCT
TCAAATGGAACTCCGCCTTCATCTTCAGATTCAAAAAATGATTCTCCTTCGTCTTCGTCT
TCGTCTTCGTCTTCATCTCCACCACCAAAAAATGAATCTCCACCTTCATCACCACCACCA
CAATCTCCTCCTCCATCTCCTAATGCATCACCACCTCCAAAAAATGATTCTCCTCCGCCT
TCTTCACCACCACCATCCTCTTCTGAATCTAATTCATCACCATCAAAAGATAATAATAAT
AATAATCAATCCCCAAATCCTTCTTCTAATACACCTTCACAATCACCACCACCATCATCC
ACGTATAATACTCCATCAACCCCAAATAGTCCTAAAAATCCTCCATCATTTCTATTATTT
TCTCCACCACCGCCTGCTTCTTCACGTGAATCGCCTGCACCTCCTCATGCACATTTGTCT
CCTCCTCCACGCTCAGGATCTAATCAACCATCACCTGCAAACGATGATTCCTCAAGTACT
GTTGGTATAGTAGCTGGAATTGCTGTCGGAGGCATCGTCATAATTGCATTAATCATTCTA
TGTGTATGGTGTAGTAAAAGGAAGAAGAAACAGAGATACTATATGGCTCCTGGACCTAAA
GGTGGTGATCCATACTACAATAACAACAATCAATGGAATAGACGTCAGTCGATGGATCAT
GTAATGAAGGTACCACAAAGTGAAATGGGGACTCAGAGTGGTTGGGCTGGAGCTACTCCA
CATCAGCAGGGAGCTAGTTCAAGCGGCGAATTTGGCTCAGGTTATTCAGGCCAAGCAGTG
CCATTGCCTTCTCAATCACCTAACATGGGACTTGGTGGTTTCTCCCAGAGCCAATTCAGT
TATGAGGAGCTAGCTAAGGCCACAGATGGATTTTCTCAGGCCAATCTGTTAGGACAAGGT
GGTTTCGGATACGTGCATAAAGGTGTTTTGAATGATGGAAGAGTGGTTGCCATCAAGAGT
TTGAAAGCAGGAAGTGGACAAGGAGAACGAGAATTTCAAGCTGAGGTTGAGATCATTAGC
AGAGTTCATCATCGTCATCTTGTGTCCCTCGTTGGATATTGCATTGCTAATGGACAACGC
ATGTTGGTCTATGAATATGTTGACAACAAAACCTTGGAGTTTCACCTTCATGGAAAAGGT
CAACCTGTCATGGATTGGGAGACCAGACTTAAAATTGCTTTGGGATCAGCTAAAGGACTT
GCTTATCTCCATGAAGATTGCCAATATAGAATTATCCACCGCGACATCAAGGCTGCAAAT
ATTCTACTAGACCTCAATTATGAAGCCTTGGTGGCAGATTTTGGATTGGCTAAGCTTACT
TCGGATAACAACACTCATGTATCAACTCGTGTTATGGGAACATTCGGGTACTTAGCTCCT
GAATATGCATCAAGTGGCAAACTAACAGAGAAGTCAGATGTGTTTTCATATGGAGTAATG
CTGTTGGAGCTCATAACCGCAAAAAAACCTGTTGATCCTAGCAATATGATGGAGGACAGT
TTAGTAGATTGGGCTAGGCCCCTTCTTACAAGAGCACTGGAAGAGGAAAAATATGATGGA
TTGGTAGACCCACGTCTTGAAGGGAACTTTGATACAGATGAGCTACATCGCATGATAGGT
TGTGCTGCTTCTAGCATTCGCCACTCTGCTAAAAGACGTCCCAAAATGAGTCAGATTGTA
CGTGCATTGGAAGGCAATTCATCGTTGGAGGACTTGAACGATAATCCAAAACCAAGCAAG
GTTCCTAGCTTTGCCGCGTCAAATGGGGCACCCACTCAGAGCTATGATACTGGTATGTAT
AATGCTGACATGATGAAGTTCAGGAAAATGATTATGCCAACCCAAGAATTCAGCAGCAGT
CCAAGTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027121
PEP Infomation

pacid=37427696 transcript=PGSC0003DMT400040010 locus=PGSC0003DMG400015476 ID=PGSC0003DMT400040010.v4.03 annot-version=v4.03
Sequence

MDSSPGTASSNDTDSKETPSSNGTPPSSSDSKNDSPSSSSSSSSSSPPPKNESPPSSPPP
QSPPPSPNASPPPKNDSPPPSSPPPSSSESNSSPSKDNNNNNQSPNPSSNTPSQSPPPSS
TYNTPSTPNSPKNPPSFLLFSPPPPASSRESPAPPHAHLSPPPRSGSNQPSPANDDSSST
VGIVAGIAVGGIVIIALIILCVWCSKRKKKQRYYMAPGPKGGDPYYNNNNQWNRRQSMDH
VMKVPQSEMGTQSGWAGATPHQQGASSSGEFGSGYSGQAVPLPSQSPNMGLGGFSQSQFS
YEELAKATDGFSQANLLGQGGFGYVHKGVLNDGRVVAIKSLKAGSGQGEREFQAEVEIIS
RVHHRHLVSLVGYCIANGQRMLVYEYVDNKTLEFHLHGKGQPVMDWETRLKIALGSAKGL
AYLHEDCQYRIIHRDIKAANILLDLNYEALVADFGLAKLTSDNNTHVSTRVMGTFGYLAP
EYASSGKLTEKSDVFSYGVMLLELITAKKPVDPSNMMEDSLVDWARPLLTRALEEEKYDG
LVDPRLEGNFDTDELHRMIGCAASSIRHSAKRRPKMSQIVRALEGNSSLEDLNDNPKPSK
VPSFAASNGAPTQSYDTGMYNADMMKFRKMIMPTQEFSSSPSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400040010
Transcript Infomation

pacid=37427696 locus=PGSC0003DMG400015476 ID=PGSC0003DMT400040010.v4.03 annot-version=v4.03
Sequence

ATGGATTCATCTCCTGGAACTGCTTCCTCCAATGATACTGATTCTAAAGAAACCCCTTCT
TCAAATGGAACTCCGCCTTCATCTTCAGATTCAAAAAATGATTCTCCTTCGTCTTCGTCT
TCGTCTTCGTCTTCATCTCCACCACCAAAAAATGAATCTCCACCTTCATCACCACCACCA
CAATCTCCTCCTCCATCTCCTAATGCATCACCACCTCCAAAAAATGATTCTCCTCCGCCT
TCTTCACCACCACCATCCTCTTCTGAATCTAATTCATCACCATCAAAAGATAATAATAAT
AATAATCAATCCCCAAATCCTTCTTCTAATACACCTTCACAATCACCACCACCATCATCC
ACGTATAATACTCCATCAACCCCAAATAGTCCTAAAAATCCTCCATCATTTCTATTATTT
TCTCCACCACCGCCTGCTTCTTCACGTGAATCGCCTGCACCTCCTCATGCACATTTGTCT
CCTCCTCCACGCTCAGGATCTAATCAACCATCACCTGCAAACGATGATTCCTCAAGTACT
GTTGGTATAGTAGCTGGAATTGCTGTCGGAGGCATCGTCATAATTGCATTAATCATTCTA
TGTGTATGGTGTAGTAAAAGGAAGAAGAAACAGAGATACTATATGGCTCCTGGACCTAAA
GGTGGTGATCCATACTACAATAACAACAATCAATGGAATAGACGTCAGTCGATGGATCAT
GTAATGAAGGTACCACAAAGTGAAATGGGGACTCAGAGTGGTTGGGCTGGAGCTACTCCA
CATCAGCAGGGAGCTAGTTCAAGCGGCGAATTTGGCTCAGGTTATTCAGGCCAAGCAGTG
CCATTGCCTTCTCAATCACCTAACATGGGACTTGGTGGTTTCTCCCAGAGCCAATTCAGT
TATGAGGAGCTAGCTAAGGCCACAGATGGATTTTCTCAGGCCAATCTGTTAGGACAAGGT
GGTTTCGGATACGTGCATAAAGGTGTTTTGAATGATGGAAGAGTGGTTGCCATCAAGAGT
TTGAAAGCAGGAAGTGGACAAGGAGAACGAGAATTTCAAGCTGAGGTTGAGATCATTAGC
AGAGTTCATCATCGTCATCTTGTGTCCCTCGTTGGATATTGCATTGCTAATGGACAACGC
ATGTTGGTCTATGAATATGTTGACAACAAAACCTTGGAGTTTCACCTTCATGGAAAAGGT
CAACCTGTCATGGATTGGGAGACCAGACTTAAAATTGCTTTGGGATCAGCTAAAGGACTT
GCTTATCTCCATGAAGATTGCCAATATAGAATTATCCACCGCGACATCAAGGCTGCAAAT
ATTCTACTAGACCTCAATTATGAAGCCTTGGTGGCAGATTTTGGATTGGCTAAGCTTACT
TCGGATAACAACACTCATGTATCAACTCGTGTTATGGGAACATTCGGGTACTTAGCTCCT
GAATATGCATCAAGTGGCAAACTAACAGAGAAGTCAGATGTGTTTTCATATGGAGTAATG
CTGTTGGAGCTCATAACCGCAAAAAAACCTGTTGATCCTAGCAATATGATGGAGGACAGT
TTAGTAGATTGGGCTAGGCCCCTTCTTACAAGAGCACTGGAAGAGGAAAAATATGATGGA
TTGGTAGACCCACGTCTTGAAGGGAACTTTGATACAGATGAGCTACATCGCATGATAGGT
TGTGCTGCTTCTAGCATTCGCCACTCTGCTAAAAGACGTCCCAAAATGAGTCAGATTGTA
CGTGCATTGGAAGGCAATTCATCGTTGGAGGACTTGAACGATAATCCAAAACCAAGCAAG
GTTCCTAGCTTTGCCGCGTCAAATGGGGCACCCACTCAGAGCTATGATACTGGTATGTAT
AATGCTGACATGATGAAGTTCAGGAAAATGATTATGCCAACCCAAGAATTCAGCAGCAGT
CCAAGTGAGTAA