Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400040004
CDS Infomation

pacid=37427687 polypeptide=PGSC0003DMP400027118 locus=PGSC0003DMG400015473 ID=PGSC0003DMT400040004.v4.03 annot-version=v4.03
Sequence

ATGAGTAAATGGGATATGAATACTATGTTTTTATCTCTGGACCCTTCTACAATTGGAGTT
CCCAGCCCAGCCCTTGATTTCTTGCCTGAAGTTGTCAAAATTCTAAGCTCTTGCAACGGG
TTGCTCCTTTGTCAGGGGTTAGAGAAGTATTATGTTTGCAATCCTGCAACCAAAAACTGG
AAAATTCTCCCCCCTCCTCGGTACTATCATGGGGATGAACCGGCAATTGTTCTTGCATTT
GAACCTTCTCTGCGTAACATTGAGGCATATTATCATGTTATCTGTGCATTTCCTATGCTT
GATCAGCCAATCATCGGATTTGAGATTTACTCTTCAGAATCAGATTCTTGGAGCTGCTCT
TCTGCAGACTGTTCTGATCTAGAAAATCCGTGTCTTGTTGGTGGGGGTTTGTTTATGAAG
GGGGTTGCTTACTATGAGACAAAATCAAACGAAGTATTGGCCTTTGATGTGAAAGAAGAG
ATCCCTGCAATTATATCTTTACCTGTTCAAGTTGGGAGGGATGGATCCTTAACACAGATG
GACGGTGAGCTGAGCTACGTTACTGCTTCTAATGAATGTGAAAATGTCTTCTTAATAGAT
ATCTACCAAGGCATGGAAATGAACCTGAAGCGCAGTGTTAGCATCAATCTTGGACCCAAG
AGGAGTCTTACTTATGCGTGCAAGGTACTACCCTGTGTTAACAGTGATGCTGTGGCTATT
CAGGTTCGCGAACACATATACTTGTATCACATCAGGGAGCAGAAAGTTGAGTCTATAGCA
AGTCCAAACGCATTCGGTTCAGCCAAAAAGTTCCTGCCCTACATAAACAGCCTTGCTAAT
GCTACATTGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027118
PEP Infomation

pacid=37427687 transcript=PGSC0003DMT400040004 locus=PGSC0003DMG400015473 ID=PGSC0003DMT400040004.v4.03 annot-version=v4.03
Sequence

MSKWDMNTMFLSLDPSTIGVPSPALDFLPEVVKILSSCNGLLLCQGLEKYYVCNPATKNW
KILPPPRYYHGDEPAIVLAFEPSLRNIEAYYHVICAFPMLDQPIIGFEIYSSESDSWSCS
SADCSDLENPCLVGGGLFMKGVAYYETKSNEVLAFDVKEEIPAIISLPVQVGRDGSLTQM
DGELSYVTASNECENVFLIDIYQGMEMNLKRSVSINLGPKRSLTYACKVLPCVNSDAVAI
QVREHIYLYHIREQKVESIASPNAFGSAKKFLPYINSLANATLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400040004
Transcript Infomation

pacid=37427687 locus=PGSC0003DMG400015473 ID=PGSC0003DMT400040004.v4.03 annot-version=v4.03
Sequence

ATGAGTAAATGGGATATGAATACTATGTTTTTATCTCTGGACCCTTCTACAATTGGAGTT
CCCAGCCCAGCCCTTGATTTCTTGCCTGAAGTTGTCAAAATTCTAAGCTCTTGCAACGGG
TTGCTCCTTTGTCAGGGGTTAGAGAAGTATTATGTTTGCAATCCTGCAACCAAAAACTGG
AAAATTCTCCCCCCTCCTCGGTACTATCATGGGGATGAACCGGCAATTGTTCTTGCATTT
GAACCTTCTCTGCGTAACATTGAGGCATATTATCATGTTATCTGTGCATTTCCTATGCTT
GATCAGCCAATCATCGGATTTGAGATTTACTCTTCAGAATCAGATTCTTGGAGCTGCTCT
TCTGCAGACTGTTCTGATCTAGAAAATCCGTGTCTTGTTGGTGGGGGTTTGTTTATGAAG
GGGGTTGCTTACTATGAGACAAAATCAAACGAAGTATTGGCCTTTGATGTGAAAGAAGAG
ATCCCTGCAATTATATCTTTACCTGTTCAAGTTGGGAGGGATGGATCCTTAACACAGATG
GACGGTGAGCTGAGCTACGTTACTGCTTCTAATGAATGTGAAAATGTCTTCTTAATAGAT
ATCTACCAAGGCATGGAAATGAACCTGAAGCGCAGTGTTAGCATCAATCTTGGACCCAAG
AGGAGTCTTACTTATGCGTGCAAGGTACTACCCTGTGTTAACAGTGATGCTGTGGCTATT
CAGGTTCGCGAACACATATACTTGTATCACATCAGGGAGCAGAAAGTTGAGTCTATAGCA
AGTCCAAACGCATTCGGTTCAGCCAAAAAGTTCCTGCCCTACATAAACAGCCTTGCTAAT
GCTACATTGAACTGA