Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039958
CDS Infomation

pacid=37449488 polypeptide=PGSC0003DMP400027084 locus=PGSC0003DMG402015455 ID=PGSC0003DMT400039958.v4.03 annot-version=v4.03
Sequence

ATGCCGAGTAACTATCTTTTTAGATTAAGCCGGGCAGCTAGACAGGGACTCCAGAAATCC
ATTTCTGGGAAAGAAAGTGGGCTCCAGGATTCGGTTGAGATTTTGGTTGCCCAAGGGAGA
TTGTTGTTTGGCAATTCAAAGTGCTTCTATTCAGTACCATTTGCAAGACCAACTGACCTG
AATGTGCTTGTCCGGCCTGGAACCTTAGCTGCCGCACAGACGAATTTGCACGTAGTAAAC
CAGAAAAAGAATATTTCTGTAGTTGGAGCTATTTCTCGTGCAGTTTCAATTCCTTCTGTG
TCAGGGCCAGCATTTCACATCTGTGGCTATCACATTGATCGCGTGATATCGGACCCTGCT
AAAAGTTTGTCTGACAGCGACTCTCACAAAGCACCTATGGAAATCTGTGGTTCTCGAACT
TCTCCTCCTGGCTGTTCCTCAAGCAAAATGACTTCAAGACATCTCAATGCTGTTCTTTCT
GTAAATAATCCTATTACCTCTTACAGCAATAAAAGCTTTGATAATTGTAGAAAAGCCAGC
ATGAGTTTGAGAAATAAAAATCAGCCCAACAACTTTTTACTTTACGGATATTTCGCATAC
AATGTAGCAAAGAGACGGGGAAATTCTAATCTATATGCAGGCTTTGGTTTGATGGGGTTC
CATACTTCATCAACTGCTTCTTCTTCTACTGGCACTGCTCATGATGTGTCATTTGGTAAC
TCTACGTGTGGGGTGCAGCTCTCAAGTTCAGCGGATTCATCTGAACAGAATATCTGCATT
GACAGAACCCTGAAACTAAATTCCGGATCATGTTACCTGCCTCATCCTGATAAAGAAGAT
ACTGGTGGAGAGGATGCTCATTTTATTTGCAGTGATGAACAAGCAATTGGTGTAGCTGAT
GGTGTTGGTGGTTGGGCTGATCTTGGTATTGATGCTGGGAAGTATGCACGAGAGCTAATG
TCGAACTCAGTGGCCGCAATTCAAGATGAGCCTAAAGGTTCAGTGGACCCAGCCAGAGTC
CTCGATAAAGCTTATACATGCACAAAAGCCAAAGGTTCCTCAACTGCCTGTATAATTGCC
CTCACAGATCAGGGTCTGCATGCTGTTAATTTAGGAGATAGCGGATTCATAGTGGTCAGA
GATGGATCTACTGTTTTCAGATCCCCTGTGCAGCAGCATGATTTCAATTTCACATATCAA
CTAGAGAGTGGTAATGCTGGTGACTTACCAAGTTCTGGAGAGGTCTTCAAAATACCAGTG
GCACAAGGAGATGTTATAATAACTGGTACTGATGGGTTGTTTGACAATTTGTACAACAAT
GATATTAATGCAATTGTTGTTCATGCAACGAGAGCTGGCTTAGGGCCACAGGTGACAGCT
CAGAAGATAGCTGCATTAGCTCGGCAAAGAGCACAGGATAAAAACAGGCAGACCCCTTTC
TCTTCTGCAGCTCAAGAAGCTGGGTTCCGTTACTATGGCGGGAAGCTGGACGATATAACT
GTGGTTGTGTCCTACATAAGCAGTGACAGAAATGAAAGATCCAACAGCTTAAAGATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027084
PEP Infomation

pacid=37449488 transcript=PGSC0003DMT400039958 locus=PGSC0003DMG402015455 ID=PGSC0003DMT400039958.v4.03 annot-version=v4.03
Sequence

MPSNYLFRLSRAARQGLQKSISGKESGLQDSVEILVAQGRLLFGNSKCFYSVPFARPTDL
NVLVRPGTLAAAQTNLHVVNQKKNISVVGAISRAVSIPSVSGPAFHICGYHIDRVISDPA
KSLSDSDSHKAPMEICGSRTSPPGCSSSKMTSRHLNAVLSVNNPITSYSNKSFDNCRKAS
MSLRNKNQPNNFLLYGYFAYNVAKRRGNSNLYAGFGLMGFHTSSTASSSTGTAHDVSFGN
STCGVQLSSSADSSEQNICIDRTLKLNSGSCYLPHPDKEDTGGEDAHFICSDEQAIGVAD
GVGGWADLGIDAGKYARELMSNSVAAIQDEPKGSVDPARVLDKAYTCTKAKGSSTACIIA
LTDQGLHAVNLGDSGFIVVRDGSTVFRSPVQQHDFNFTYQLESGNAGDLPSSGEVFKIPV
AQGDVIITGTDGLFDNLYNNDINAIVVHATRAGLGPQVTAQKIAALARQRAQDKNRQTPF
SSAAQEAGFRYYGGKLDDITVVVSYISSDRNERSNSLKM*

Transcript Sequence

Transcript ID

PGSC0003DMT400039958
Transcript Infomation

pacid=37449488 locus=PGSC0003DMG402015455 ID=PGSC0003DMT400039958.v4.03 annot-version=v4.03
Sequence

ATGCCGAGTAACTATCTTTTTAGATTAAGCCGGGCAGCTAGACAGGGACTCCAGAAATCC
ATTTCTGGGAAAGAAAGTGGGCTCCAGGATTCGGTTGAGATTTTGGTTGCCCAAGGGAGA
TTGTTGTTTGGCAATTCAAAGTGCTTCTATTCAGTACCATTTGCAAGACCAACTGACCTG
AATGTGCTTGTCCGGCCTGGAACCTTAGCTGCCGCACAGACGAATTTGCACGTAGTAAAC
CAGAAAAAGAATATTTCTGTAGTTGGAGCTATTTCTCGTGCAGTTTCAATTCCTTCTGTG
TCAGGGCCAGCATTTCACATCTGTGGCTATCACATTGATCGCGTGATATCGGACCCTGCT
AAAAGTTTGTCTGACAGCGACTCTCACAAAGCACCTATGGAAATCTGTGGTTCTCGAACT
TCTCCTCCTGGCTGTTCCTCAAGCAAAATGACTTCAAGACATCTCAATGCTGTTCTTTCT
GTAAATAATCCTATTACCTCTTACAGCAATAAAAGCTTTGATAATTGTAGAAAAGCCAGC
ATGAGTTTGAGAAATAAAAATCAGCCCAACAACTTTTTACTTTACGGATATTTCGCATAC
AATGTAGCAAAGAGACGGGGAAATTCTAATCTATATGCAGGCTTTGGTTTGATGGGGTTC
CATACTTCATCAACTGCTTCTTCTTCTACTGGCACTGCTCATGATGTGTCATTTGGTAAC
TCTACGTGTGGGGTGCAGCTCTCAAGTTCAGCGGATTCATCTGAACAGAATATCTGCATT
GACAGAACCCTGAAACTAAATTCCGGATCATGTTACCTGCCTCATCCTGATAAAGAAGAT
ACTGGTGGAGAGGATGCTCATTTTATTTGCAGTGATGAACAAGCAATTGGTGTAGCTGAT
GGTGTTGGTGGTTGGGCTGATCTTGGTATTGATGCTGGGAAGTATGCACGAGAGCTAATG
TCGAACTCAGTGGCCGCAATTCAAGATGAGCCTAAAGGTTCAGTGGACCCAGCCAGAGTC
CTCGATAAAGCTTATACATGCACAAAAGCCAAAGGTTCCTCAACTGCCTGTATAATTGCC
CTCACAGATCAGGGTCTGCATGCTGTTAATTTAGGAGATAGCGGATTCATAGTGGTCAGA
GATGGATCTACTGTTTTCAGATCCCCTGTGCAGCAGCATGATTTCAATTTCACATATCAA
CTAGAGAGTGGTAATGCTGGTGACTTACCAAGTTCTGGAGAGGTCTTCAAAATACCAGTG
GCACAAGGAGATGTTATAATAACTGGTACTGATGGGTTGTTTGACAATTTGTACAACAAT
GATATTAATGCAATTGTTGTTCATGCAACGAGAGCTGGCTTAGGGCCACAGGTGACAGCT
CAGAAGATAGCTGCATTAGCTCGGCAAAGAGCACAGGATAAAAACAGGCAGACCCCTTTC
TCTTCTGCAGCTCAAGAAGCTGGGTTCCGTTACTATGGCGGGAAGCTGGACGATATAACT
GTGGTTGTGTCCTACATAAGCAGTGACAGAAATGAAAGATCCAACAGCTTAAAGATGTAG