Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039948
CDS Infomation

pacid=37449444 polypeptide=PGSC0003DMP400027076 locus=PGSC0003DMG400015452 ID=PGSC0003DMT400039948.v4.03 annot-version=v4.03
Sequence

ATGGAGGACTATATCTATGTGAGCAGCGATGATGATGAATGGGACAATCAACAGTATAAT
AATGACGATGACGACGACGATGATGATGATGATGATGATGATGGTGAATTTCTTGATGGG
TTTACCGAAATTGAACAAGAGAGAAATGGAATCTCCAAAAAGGGTCCTTCATGCAAGGTA
ATCAGGAAAGAGACTCTTTTAGCTGCACAGAAAGAAGACTTGCAAAGAGTGATGGACTTG
CTATCTCTGAAGGAACATCATGCTCGAAGCTTGCTTATTCATTACCGATGGGAAGTTGAC
AAGGTCTTTGCGGTTCTTGTTGAGAGAGGGACAGAAAAGTTATATGCTGAAGCGGGTGTG
ACACTGGACGGGAAAGATGAACATACTTCCACTCTGTCGACATCTGAAGTGACATGTCAA
ATTTGCTTCGAAGATGTCCCTGTTGAGAAGACTACTGTAATGGACTGCAACCATATATTT
TGCAATGAATGTTGGACAACTCATTTCATTGTAAAAATAAATGAGGGTCAGAGTAAACAA
GTAACTTGCATGGCCCAAAAGTGCAATGTGATCTGTGATGAAGGAAAGATTAGGGATCTC
GTCACTGCAAAAGATCCTGCTTTGGCAGAGAAATTTGATCGTTTTCTGTTAGAGTCATAT
ATTGATGATAACAAGAGGGTTAAATGGTGCCCTAGTGTTCCTCATTGTGGAAATGCAATT
CGTATTGAGGATGATGAATACTGCTGTGAGGTTGAATGTGCATGTGGTGTACAGTTCTGT
TTTAATTGTTTATCAGAAGCACACTCTCCTTGTTCATGTCTGATGTGGAAACTTTGGATG
AAGAAGTGCAAGAACGATGGTAAGACAGTAACATGGATAAGTGAAAATGCCAAACATTGC
CCAAAATGTCATAATGCCGTGGAGAAGAATGGGGGATGCAACCTTGTAAGATGTAGATGT
GGACAGCCGTTTTGTTGGTTGTGTGGTGGAGCTACTGGTTTAGAACACACATGGAGTAGC
ATTCGAGGTCACACTTGTGGCAGTTATAAGGAAGGGGAAGAGGAAAAGACGACGACTGTC
AGAAATGATCTCTTGCGCTATACTCATTATTATGAGCGCTATATGGTTCATCGTGATTCG
TTGGAGGCTGAAGCAAACATGAAGCAAAAACTAAATTTTGAAGTGTTGAAACTTGAAGCA
GGGGAATTGCAATCAAAGGACTTCAGCTGGGTAGAAAATGGATGTAATAGACTCCTTCAA
TTAAGGCGAATTCTCTCCTGTTCCTATCCAGTTTCATTTTACGTTTTTGGTCAGGCGCTG
TTCAAGGATGAAATGACACCAAAAGAAAGGGAAATAAAGAAGAACCTTTTTGAAAACCTG
CAGCAGCAACTTGAAATAAATGTTGAAAGACTTTCGATGTTCTTGGAGGAACCATTTGCT
GACCATCCTGAAGATAAACTTTTGGAGACTAGAATGAAGATCATCACTCTCTCTGTACTA
ACAGACAACCTCTGCAAAGAGTTGTACGATTGCATTGACAACGATTTACTGCTTCCTCTA
CAGCAGGCGACTCATACCATAGCTCATTATAGATCCGAGGGAGTGGCTAAAGCATCAGAA
CTTCCTAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027076
PEP Infomation

pacid=37449444 transcript=PGSC0003DMT400039948 locus=PGSC0003DMG400015452 ID=PGSC0003DMT400039948.v4.03 annot-version=v4.03
Sequence

MEDYIYVSSDDDEWDNQQYNNDDDDDDDDDDDDDGEFLDGFTEIEQERNGISKKGPSCKV
IRKETLLAAQKEDLQRVMDLLSLKEHHARSLLIHYRWEVDKVFAVLVERGTEKLYAEAGV
TLDGKDEHTSTLSTSEVTCQICFEDVPVEKTTVMDCNHIFCNECWTTHFIVKINEGQSKQ
VTCMAQKCNVICDEGKIRDLVTAKDPALAEKFDRFLLESYIDDNKRVKWCPSVPHCGNAI
RIEDDEYCCEVECACGVQFCFNCLSEAHSPCSCLMWKLWMKKCKNDGKTVTWISENAKHC
PKCHNAVEKNGGCNLVRCRCGQPFCWLCGGATGLEHTWSSIRGHTCGSYKEGEEEKTTTV
RNDLLRYTHYYERYMVHRDSLEAEANMKQKLNFEVLKLEAGELQSKDFSWVENGCNRLLQ
LRRILSCSYPVSFYVFGQALFKDEMTPKEREIKKNLFENLQQQLEINVERLSMFLEEPFA
DHPEDKLLETRMKIITLSVLTDNLCKELYDCIDNDLLLPLQQATHTIAHYRSEGVAKASE
LPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400039948
Transcript Infomation

pacid=37449444 locus=PGSC0003DMG400015452 ID=PGSC0003DMT400039948.v4.03 annot-version=v4.03
Sequence

ATGGAGGACTATATCTATGTGAGCAGCGATGATGATGAATGGGACAATCAACAGTATAAT
AATGACGATGACGACGACGATGATGATGATGATGATGATGATGGTGAATTTCTTGATGGG
TTTACCGAAATTGAACAAGAGAGAAATGGAATCTCCAAAAAGGGTCCTTCATGCAAGGTA
ATCAGGAAAGAGACTCTTTTAGCTGCACAGAAAGAAGACTTGCAAAGAGTGATGGACTTG
CTATCTCTGAAGGAACATCATGCTCGAAGCTTGCTTATTCATTACCGATGGGAAGTTGAC
AAGGTCTTTGCGGTTCTTGTTGAGAGAGGGACAGAAAAGTTATATGCTGAAGCGGGTGTG
ACACTGGACGGGAAAGATGAACATACTTCCACTCTGTCGACATCTGAAGTGACATGTCAA
ATTTGCTTCGAAGATGTCCCTGTTGAGAAGACTACTGTAATGGACTGCAACCATATATTT
TGCAATGAATGTTGGACAACTCATTTCATTGTAAAAATAAATGAGGGTCAGAGTAAACAA
GTAACTTGCATGGCCCAAAAGTGCAATGTGATCTGTGATGAAGGAAAGATTAGGGATCTC
GTCACTGCAAAAGATCCTGCTTTGGCAGAGAAATTTGATCGTTTTCTGTTAGAGTCATAT
ATTGATGATAACAAGAGGGTTAAATGGTGCCCTAGTGTTCCTCATTGTGGAAATGCAATT
CGTATTGAGGATGATGAATACTGCTGTGAGGTTGAATGTGCATGTGGTGTACAGTTCTGT
TTTAATTGTTTATCAGAAGCACACTCTCCTTGTTCATGTCTGATGTGGAAACTTTGGATG
AAGAAGTGCAAGAACGATGGTAAGACAGTAACATGGATAAGTGAAAATGCCAAACATTGC
CCAAAATGTCATAATGCCGTGGAGAAGAATGGGGGATGCAACCTTGTAAGATGTAGATGT
GGACAGCCGTTTTGTTGGTTGTGTGGTGGAGCTACTGGTTTAGAACACACATGGAGTAGC
ATTCGAGGTCACACTTGTGGCAGTTATAAGGAAGGGGAAGAGGAAAAGACGACGACTGTC
AGAAATGATCTCTTGCGCTATACTCATTATTATGAGCGCTATATGGTTCATCGTGATTCG
TTGGAGGCTGAAGCAAACATGAAGCAAAAACTAAATTTTGAAGTGTTGAAACTTGAAGCA
GGGGAATTGCAATCAAAGGACTTCAGCTGGGTAGAAAATGGATGTAATAGACTCCTTCAA
TTAAGGCGAATTCTCTCCTGTTCCTATCCAGTTTCATTTTACGTTTTTGGTCAGGCGCTG
TTCAAGGATGAAATGACACCAAAAGAAAGGGAAATAAAGAAGAACCTTTTTGAAAACCTG
CAGCAGCAACTTGAAATAAATGTTGAAAGACTTTCGATGTTCTTGGAGGAACCATTTGCT
GACCATCCTGAAGATAAACTTTTGGAGACTAGAATGAAGATCATCACTCTCTCTGTACTA
ACAGACAACCTCTGCAAAGAGTTGTACGATTGCATTGACAACGATTTACTGCTTCCTCTA
CAGCAGGCGACTCATACCATAGCTCATTATAGATCCGAGGGAGTGGCTAAAGCATCAGAA
CTTCCTAATTGA