Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039937
CDS Infomation

pacid=37448305 polypeptide=PGSC0003DMP400027066 locus=PGSC0003DMG400015448 ID=PGSC0003DMT400039937.v4.03 annot-version=v4.03
Sequence

ATGCCATTTCCAAGGAAAGCATTATCATTGTTTTTAAGTTCCTCTGCTTCTGCTTCTGCT
TCTGCTTCACCTTCTCATGAGTCTCCTAAGACTTATGGAGGTGGAGGAGGAAGGAGGCTT
ACTCGTATACGTAAATTGAGACATGTTGGTGATGATGAGATTGATTTGCAGCCAAATGAT
TTTGGTTCTCAATCTATGCCTGTTTCTCCTGATTCCTATAAGAATTCAGGATCATCAGGG
TCTCAATCAACTCGGTGTCATCAGCGTTGTCATTGGTCTAAATCTGTCGAGCCTCAGCCT
TTGCCATTACCTGAGTTCAATTCTGTGCCAAAACAAAGTACTAGTGATGCTAATTTGCCT
ACCAGAGTACTCCAAGGGGATGTTTCAAATCCTGTTGTTATAAGGGATCCTTCTCATCAA
ACTCCAGTGGAGATGGCAAATCCTGTGCATAGAAGATCATCTACTCCAACTTATCGTCGT
CGACGTTTCAGTCAGGATAAGAATTCTGAAGGTGTTGAAGAGAACTTCAGGCTTAATGTC
CCTGCTAGAAGTGCTCCAGGCAGTGGTTTTACAAGTCCGAATCTTAGCCCGAAAAGATAT
AGCACAGTAGACCTTTTCCATCCTACATTTCATCAGGGATCATCACCTTCAGGCACTTCT
TCGGATAGATGGGTAGGTTATTCTGCCCAACTTTTGACAGCAAGGGTTACACAAAGTGCT
GATCATTCTCCCCTTAGTAGCCCGACTCAACAAAATCCAGTAAACAAAACTTGGAATCAC
CAAAATGTTGCTGTGCATTCACCTCACAAATCACTCCCGGAAAGTCCGGTGGATTGGCCT
GAAGGCAATAATGTGCACCCTCTACCACTTCCACCCGGAATTTCACAACAGCCACAGTTA
CCTACCACTCAAAACAAAACGGATAAATCAGATATACCATATGTAAAAGGCCAATGGCAA
AAGGGGAAACTTTTAGGCCGTGGTACTTATGGAAGTGTATATGAAGCTACTAACCGTGAA
ACCGGTGCTTTGTGTGCGATGAAAGAAGTTGATCTCAATCCAGATGATCCTAAATCTGCC
GAATGTATAAAGCAGCTAGAACAGGAAATAAGAGTTCTCCGACAGTTGAAGCACCAAAAT
ATTGTTCACTATTACGGCAGTGAAATAATGGAAGATAGCTTTTGCATATATCTGGAATAT
GTTCATCCAGGATCAATTAATAAGTTTGTCCGGGATCATGGTGGAGCTATGACAGAGTCG
ATAGTTCGAAATTTTACAAGACATATAGTATCAGGGCTGGCTTACTTGCACAGCACTAAG
ACGATACACAGGGACATTAAGGGGGCGAATTTGCTTGTTGATGCATCGGGAATCGTCAAG
CTTGCAGACTTTGGATTAGCAAAACATCTGTCGGGTCATGCAACTGAGCTCTCTCTGAAA
GGGAGTCCACACTGGATGGCTCCAGAGGTAATGCAGGCTATGTTACGGAAAGATGCCAAT
CCAGAGCTTGCCTGTGCTATTGATATTTGGAGTCTAGGTTGTACTGTAATTGAAATGTTT
ACTGGACAGCCCCCTTGGAGTGGATTAGACGGGGTGAAAGCTATGTTCAGTGCACTAAAC
AAATCACCACCTATACCAGAAACGTTGTCTTCGGAAGGAAAGGATTTCCTCCGGTGCTGC
TTTCAGAGGAAACCTGCAGATAGACCAACAGCTTTGATGCTACTTGAGCATTCTTTTTTA
AGTAATACTAATTCGCGTGAACATATTGCTACTGTTTCAGGTTCCTCAGAAGATTTTTCG
CGGATGAAATTACATAGTCCAAAGGATCTGACAAACCATAACATGGAATTGAATTCATCT
AGGTACACAAAATCTCCATATAACGGGTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400027066
PEP Infomation

pacid=37448305 transcript=PGSC0003DMT400039937 locus=PGSC0003DMG400015448 ID=PGSC0003DMT400039937.v4.03 annot-version=v4.03
Sequence

MPFPRKALSLFLSSSASASASASPSHESPKTYGGGGGRRLTRIRKLRHVGDDEIDLQPND
FGSQSMPVSPDSYKNSGSSGSQSTRCHQRCHWSKSVEPQPLPLPEFNSVPKQSTSDANLP
TRVLQGDVSNPVVIRDPSHQTPVEMANPVHRRSSTPTYRRRRFSQDKNSEGVEENFRLNV
PARSAPGSGFTSPNLSPKRYSTVDLFHPTFHQGSSPSGTSSDRWVGYSAQLLTARVTQSA
DHSPLSSPTQQNPVNKTWNHQNVAVHSPHKSLPESPVDWPEGNNVHPLPLPPGISQQPQL
PTTQNKTDKSDIPYVKGQWQKGKLLGRGTYGSVYEATNRETGALCAMKEVDLNPDDPKSA
ECIKQLEQEIRVLRQLKHQNIVHYYGSEIMEDSFCIYLEYVHPGSINKFVRDHGGAMTES
IVRNFTRHIVSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGLAKHLSGHATELSLK
GSPHWMAPEVMQAMLRKDANPELACAIDIWSLGCTVIEMFTGQPPWSGLDGVKAMFSALN
KSPPIPETLSSEGKDFLRCCFQRKPADRPTALMLLEHSFLSNTNSREHIATVSGSSEDFS
RMKLHSPKDLTNHNMELNSSRYTKSPYNGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400039937
Transcript Infomation

pacid=37448305 locus=PGSC0003DMG400015448 ID=PGSC0003DMT400039937.v4.03 annot-version=v4.03
Sequence

ATGCCATTTCCAAGGAAAGCATTATCATTGTTTTTAAGTTCCTCTGCTTCTGCTTCTGCT
TCTGCTTCACCTTCTCATGAGTCTCCTAAGACTTATGGAGGTGGAGGAGGAAGGAGGCTT
ACTCGTATACGTAAATTGAGACATGTTGGTGATGATGAGATTGATTTGCAGCCAAATGAT
TTTGGTTCTCAATCTATGCCTGTTTCTCCTGATTCCTATAAGAATTCAGGATCATCAGGG
TCTCAATCAACTCGGTGTCATCAGCGTTGTCATTGGTCTAAATCTGTCGAGCCTCAGCCT
TTGCCATTACCTGAGTTCAATTCTGTGCCAAAACAAAGTACTAGTGATGCTAATTTGCCT
ACCAGAGTACTCCAAGGGGATGTTTCAAATCCTGTTGTTATAAGGGATCCTTCTCATCAA
ACTCCAGTGGAGATGGCAAATCCTGTGCATAGAAGATCATCTACTCCAACTTATCGTCGT
CGACGTTTCAGTCAGGATAAGAATTCTGAAGGTGTTGAAGAGAACTTCAGGCTTAATGTC
CCTGCTAGAAGTGCTCCAGGCAGTGGTTTTACAAGTCCGAATCTTAGCCCGAAAAGATAT
AGCACAGTAGACCTTTTCCATCCTACATTTCATCAGGGATCATCACCTTCAGGCACTTCT
TCGGATAGATGGGTAGGTTATTCTGCCCAACTTTTGACAGCAAGGGTTACACAAAGTGCT
GATCATTCTCCCCTTAGTAGCCCGACTCAACAAAATCCAGTAAACAAAACTTGGAATCAC
CAAAATGTTGCTGTGCATTCACCTCACAAATCACTCCCGGAAAGTCCGGTGGATTGGCCT
GAAGGCAATAATGTGCACCCTCTACCACTTCCACCCGGAATTTCACAACAGCCACAGTTA
CCTACCACTCAAAACAAAACGGATAAATCAGATATACCATATGTAAAAGGCCAATGGCAA
AAGGGGAAACTTTTAGGCCGTGGTACTTATGGAAGTGTATATGAAGCTACTAACCGTGAA
ACCGGTGCTTTGTGTGCGATGAAAGAAGTTGATCTCAATCCAGATGATCCTAAATCTGCC
GAATGTATAAAGCAGCTAGAACAGGAAATAAGAGTTCTCCGACAGTTGAAGCACCAAAAT
ATTGTTCACTATTACGGCAGTGAAATAATGGAAGATAGCTTTTGCATATATCTGGAATAT
GTTCATCCAGGATCAATTAATAAGTTTGTCCGGGATCATGGTGGAGCTATGACAGAGTCG
ATAGTTCGAAATTTTACAAGACATATAGTATCAGGGCTGGCTTACTTGCACAGCACTAAG
ACGATACACAGGGACATTAAGGGGGCGAATTTGCTTGTTGATGCATCGGGAATCGTCAAG
CTTGCAGACTTTGGATTAGCAAAACATCTGTCGGGTCATGCAACTGAGCTCTCTCTGAAA
GGGAGTCCACACTGGATGGCTCCAGAGGTAATGCAGGCTATGTTACGGAAAGATGCCAAT
CCAGAGCTTGCCTGTGCTATTGATATTTGGAGTCTAGGTTGTACTGTAATTGAAATGTTT
ACTGGACAGCCCCCTTGGAGTGGATTAGACGGGGTGAAAGCTATGTTCAGTGCACTAAAC
AAATCACCACCTATACCAGAAACGTTGTCTTCGGAAGGAAAGGATTTCCTCCGGTGCTGC
TTTCAGAGGAAACCTGCAGATAGACCAACAGCTTTGATGCTACTTGAGCATTCTTTTTTA
AGTAATACTAATTCGCGTGAACATATTGCTACTGTTTCAGGTTCCTCAGAAGATTTTTCG
CGGATGAAATTACATAGTCCAAAGGATCTGACAAACCATAACATGGAATTGAATTCATCT
AGGTACACAAAATCTCCATATAACGGGTACTAG