Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039928
CDS Infomation

pacid=37448705 polypeptide=PGSC0003DMP400027059 locus=PGSC0003DMG400015445 ID=PGSC0003DMT400039928.v4.03 annot-version=v4.03
Sequence

ATGCAGAAATTGAAACTGATACAATCACTCTATCGTTCTGTATGTCGCAGATCTTCAGCT
TTCTCGGTTTCCGCCGCCGCAGCTGCCGCCGTCAACCACCACTCCCATCGGGACCTTCAT
TTTTCAGCTTCTCCTAGAACCCCTTTTCAATTGCGACATCCTTTGACAACTGCAATAGGA
AGCACACGTTCGTTTAGTGAGGATGTGGCCCACATGCCTGACATAGAAGATCTGGAGATC
AAACGAGCTTTTAAGGACTTGATGGCTGCAAGCTGGGATGAGCTCCCCAATGCAGTTGTT
GGTGATGCAGAGAATGCATTGACAAAAAGTACTGATGACAAAGCTGGTCAGGAAGCCTTG
ATTAATGTTTTCCGTGCAGCAGAGGCAGTGGAGGAGTTCACAGGGATTCTCACATCTCTG
AAAATGGAGATGGATGACGCGATTGGTTTAAGTGGTGAGAATGTGAAGCCTATGTCAAAA
GAATTCTCTGAAGCATTCCAAACAATACTTCAACGTTACAACACCTACTTGAGTGCTTTT
GGGTTAGAAGAGGTATACTTGAAGAAGAAAGTGGAGATGGAACTAGGGACAAAGATGATA
CACTTGAAAATGAGATGCAGTGGCCTTGATTCTGAATGGGGAAAGGGCATTAAAGTGGCA
GAGGGAGAGGAGAGGACACCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027059
PEP Infomation

pacid=37448705 transcript=PGSC0003DMT400039928 locus=PGSC0003DMG400015445 ID=PGSC0003DMT400039928.v4.03 annot-version=v4.03
Sequence

MQKLKLIQSLYRSVCRRSSAFSVSAAAAAAVNHHSHRDLHFSASPRTPFQLRHPLTTAIG
STRSFSEDVAHMPDIEDLEIKRAFKDLMAASWDELPNAVVGDAENALTKSTDDKAGQEAL
INVFRAAEAVEEFTGILTSLKMEMDDAIGLSGENVKPMSKEFSEAFQTILQRYNTYLSAF
GLEEVYLKKKVEMELGTKMIHLKMRCSGLDSEWGKGIKVAEGEERTP*

Transcript Sequence

Transcript ID

PGSC0003DMT400039928
Transcript Infomation

pacid=37448705 locus=PGSC0003DMG400015445 ID=PGSC0003DMT400039928.v4.03 annot-version=v4.03
Sequence

ATGCAGAAATTGAAACTGATACAATCACTCTATCGTTCTGTATGTCGCAGATCTTCAGCT
TTCTCGGTTTCCGCCGCCGCAGCTGCCGCCGTCAACCACCACTCCCATCGGGACCTTCAT
TTTTCAGCTTCTCCTAGAACCCCTTTTCAATTGCGACATCCTTTGACAACTGCAATAGGA
AGCACACGTTCGTTTAGTGAGGATGTGGCCCACATGCCTGACATAGAAGATCTGGAGATC
AAACGAGCTTTTAAGGACTTGATGGCTGCAAGCTGGGATGAGCTCCCCAATGCAGTTGTT
GGTGATGCAGAGAATGCATTGACAAAAAGTACTGATGACAAAGCTGGTCAGGAAGCCTTG
ATTAATGTTTTCCGTGCAGCAGAGGCAGTGGAGGAGTTCACAGGGATTCTCACATCTCTG
AAAATGGAGATGGATGACGCGATTGGTTTAAGTGGTGAGAATGTGAAGCCTATGTCAAAA
GAATTCTCTGAAGCATTCCAAACAATACTTCAACGTTACAACACCTACTTGAGTGCTTTT
GGGTTAGAAGAGGTATACTTGAAGAAGAAAGTGGAGATGGAACTAGGGACAAAGATGATA
CACTTGAAAATGAGATGCAGTGGCCTTGATTCTGAATGGGGAAAGGGCATTAAAGTGGCA
GAGGGAGAGGAGAGGACACCCTGA