Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039926
CDS Infomation

pacid=37447702 polypeptide=PGSC0003DMP400027057 locus=PGSC0003DMG400015444 ID=PGSC0003DMT400039926.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAAAGTGGTATTGGTAACCGGTGCTTCCGGTTACCTCGGTGGATGTCTCTGC
CGTGAGTTATTCAACGCCGGCCACCATGTTAAAGCCTTCGTCCGCCGTACAAGCGACCTT
TCTTCTCTACCTCCGCCTACTGACGGCGGAAGTAGCGGCGGAACCCTAGAGATTGTGTTC
GGAGATGTCACCGATTATCAATCACTCCTCCAGGCTTGCTCCGGTTGCCAAATAATTTTT
CATGCTGCTGCATTAGTTGAACCATGGCTTCCAGATCCATCTAGATTCACCTCCGTCAAT
GTTGGAGGCTTGAAGAATGTGTTGCAAGCTTATAAAGAAACTGGAACTATAGAGAAAATT
TTGTACACATCATCGTTTTTTGCCTTGGGACCAACCGATGGATATGTTGCCGATGAAGCT
CAGATTCATTCAGGAAAATTCTTCTGTACGGAGTATGAGAAATCAAAAGCTGTTGCTGAT
AAGGTTGCATTAGATGCTGTGTCTGAAGGAATGCCAATATTGCCTGTTTATCCAGGAGTC
ATTTATGGTCCCGGGAAGGTCACGGCTGGAAATGTCGTTGCCCGTATGCTAATTGAACGC
TTTAATGGGCGTTTACCTGGTTACATTGGCCAAGCAAATGACAGGTTTTCTTTTAGCCAT
GTTGATGATGTGGTTGATGGGCATATTGCAGCTATGGACAAAGGCAAACTTGGTGAAAGG
TATCTTCTTACAGGGGAGAATGCGTCCTTTAAGGAAGTTTTCGACATAGCTGCCATGGTC
ACTCAGACAAAGAGGCCTTCGTTTGGTATCCCCCTACTTATTATTGAAGCTTATGGCTGG
ATATCCGTTCTTTTCTCCAAATTAACTGGAAAGCTTCCTCTAATCAGTCCTCCGACTGTT
TGCGTGCTTAGACATCAGTGGGCTTACTCTTGTGATAAGGCAAAGTCAGAACTGGATTAC
CACCCGAGAAGCTTGAAAGAAGGTCTGTCTGAGGTGCTTCCCTGGCTAAAGAACTTGGGA
TTGATCAAATACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400027057
PEP Infomation

pacid=37447702 transcript=PGSC0003DMT400039926 locus=PGSC0003DMG400015444 ID=PGSC0003DMT400039926.v4.03 annot-version=v4.03
Sequence

MKKKVVLVTGASGYLGGCLCRELFNAGHHVKAFVRRTSDLSSLPPPTDGGSSGGTLEIVF
GDVTDYQSLLQACSGCQIIFHAAALVEPWLPDPSRFTSVNVGGLKNVLQAYKETGTIEKI
LYTSSFFALGPTDGYVADEAQIHSGKFFCTEYEKSKAVADKVALDAVSEGMPILPVYPGV
IYGPGKVTAGNVVARMLIERFNGRLPGYIGQANDRFSFSHVDDVVDGHIAAMDKGKLGER
YLLTGENASFKEVFDIAAMVTQTKRPSFGIPLLIIEAYGWISVLFSKLTGKLPLISPPTV
CVLRHQWAYSCDKAKSELDYHPRSLKEGLSEVLPWLKNLGLIKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400039926
Transcript Infomation

pacid=37447702 locus=PGSC0003DMG400015444 ID=PGSC0003DMT400039926.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAAAGTGGTATTGGTAACCGGTGCTTCCGGTTACCTCGGTGGATGTCTCTGC
CGTGAGTTATTCAACGCCGGCCACCATGTTAAAGCCTTCGTCCGCCGTACAAGCGACCTT
TCTTCTCTACCTCCGCCTACTGACGGCGGAAGTAGCGGCGGAACCCTAGAGATTGTGTTC
GGAGATGTCACCGATTATCAATCACTCCTCCAGGCTTGCTCCGGTTGCCAAATAATTTTT
CATGCTGCTGCATTAGTTGAACCATGGCTTCCAGATCCATCTAGATTCACCTCCGTCAAT
GTTGGAGGCTTGAAGAATGTGTTGCAAGCTTATAAAGAAACTGGAACTATAGAGAAAATT
TTGTACACATCATCGTTTTTTGCCTTGGGACCAACCGATGGATATGTTGCCGATGAAGCT
CAGATTCATTCAGGAAAATTCTTCTGTACGGAGTATGAGAAATCAAAAGCTGTTGCTGAT
AAGGTTGCATTAGATGCTGTGTCTGAAGGAATGCCAATATTGCCTGTTTATCCAGGAGTC
ATTTATGGTCCCGGGAAGGTCACGGCTGGAAATGTCGTTGCCCGTATGCTAATTGAACGC
TTTAATGGGCGTTTACCTGGTTACATTGGCCAAGCAAATGACAGGTTTTCTTTTAGCCAT
GTTGATGATGTGGTTGATGGGCATATTGCAGCTATGGACAAAGGCAAACTTGGTGAAAGG
TATCTTCTTACAGGGGAGAATGCGTCCTTTAAGGAAGTTTTCGACATAGCTGCCATGGTC
ACTCAGACAAAGAGGCCTTCGTTTGGTATCCCCCTACTTATTATTGAAGCTTATGGCTGG
ATATCCGTTCTTTTCTCCAAATTAACTGGAAAGCTTCCTCTAATCAGTCCTCCGACTGTT
TGCGTGCTTAGACATCAGTGGGCTTACTCTTGTGATAAGGCAAAGTCAGAACTGGATTAC
CACCCGAGAAGCTTGAAAGAAGGTCTGTCTGAGGTGCTTCCCTGGCTAAAGAACTTGGGA
TTGATCAAATACTGA