Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039921
CDS Infomation

pacid=37446117 polypeptide=PGSC0003DMP400027053 locus=PGSC0003DMG400015441 ID=PGSC0003DMT400039921.v4.03 annot-version=v4.03
Sequence

ATGGAAGATGTTAAAGATCTGAAGCAACACGCTCCGGAGTCCTCTCCTACACCTGTTGTT
GTTGTTTCCTCTCCGGACGAGGATCAATCACTTAGTGCAACTCAAACCAGCCAAAATGCA
GATGAAAAAGCAAACTTGGAGAATCAGCAGCTGAACGTGGATGCTTCGGAGCATGTAGAA
GAGGCTACTCAAAGCTTGTCGTTGGAGAAGAGTGAGACTCATCCAACAGGAGCTTCTAGT
ACACCTATGGTTGATCAGGAAGACTCATCTCAATCTGTACATAGTCCTAAGCCATCGGAG
CCTCCTATCGATAAAAAATCAACAGCTTTATCCGAAACTAGTCCATCCTCTCTATCAAAT
GAAAAACCAAGTAGTTCCAAAGAGGAAGAACATATTCAATCTAATCATTCAGGAGAAGAT
CAAGCAAGTAATAGTTCTCCTAGTAGTACCAAAAGTGCTGATGATTCGTGTTCTACTTCC
CACGTCCAAGAGACGAAACCTGAAAATAATAGTCATGTAGAGTCATTGGATAACATTGAC
AAGGCTCCCACTCTCAGAATCAAGATCCCAGGACCTACTGCTCAGTCTAAGCAGCCTGAG
AACGTTGACGTAAACAGAGTTAATATCGATACAGCAGCACCAATCCAATCGGTGAAACAG
GCAGTTTCAAAGTTTGGAGGGATTGTCGACTGGAAGGCTCATAGACAACAGACAGTCGAG
AGACGGAATCTTATCGAGCAAGAACTAACAAAAGTGCAAGAGGAGATCCCATTGTATAAG
AAACAATGTCAGGATGCAGAAGATGCAAAAGTACTAGTTTTGAAAGAACTAGATAGCACT
AAGAGACTCATAGAAGAATTAAAGCTCAACCTAGAGAGAGCACAAACAGAAGAGCAACAA
GCAAGACAGGATTCAGAACTTGCCACGCTCAGGGTCGAAGAGATGGAGCGGGGTATTGCT
GATGACTCTAGTATTGCAGCTAAAGCACAGCTTGAAGTTGCCAGAGCTAGGCTTGAAGCT
GCAGTTTCAGAGCTAAAATCTGTTAACTCCGAATTAGATGTTCTCCGTATGGATTATGAT
TTATTGGTATCCGAAAAAGATGTTGCTGTGGAAAAAGCAGAAGAAGCTGTTTCGTTATCA
AATGAAGTTGAGAAGACAGTTGAGGATTTGACTATTGAGCTCATTACTTCAAAGGATGCT
TTGGAGGCTGCACATGCTGCACATCTAGAGGCCGAGGAACATAGAGTCGGAGCAGCTATG
GCAAGAGAGCAAGATACTCTAAACTGGGAGAACGAACTGAAGCAGGCGGAAGAAGAGCTT
GAGAGGCTAAACCATCAAATTCTGTCTGCAAAGGATCATAAAGCAAAATTAGATACTGCT
TCATCTTTGTTACAAGATCTCAACACTGAGTTAGCAGCTTATATGGAATCAAAGTTGAAA
CAGGAGGCTGATGAAGAAGGGAACATGAAAGGCGAGCAATTAGAGACGGATAAAAGAAGT
CATCATGAGATACAAGCAGTCGTGGCATCAGCTAAGAAGGAACTCGAAGAAGTGAAACTC
AACATTGAGAAAGCAACAGCTGAAGTAGAATGCCTGAAAGTAGCAGCAGTCGCATTAAAG
GCAGAATTGGAAAAGGAAAAATCAGAACTAGCTTCCATACAACAGAGAGAAGGAATGGCA
GCAATTGCCATTACATCTCTTGAAGCTGAGTTGAACCGAACAAAGTCAGAGATTTCCCTT
TTGCAGATAAAGGAAAAAGAAGCAAGAGAAAAGATGGTGGAGCTACCGAAGCAACTGCAA
GAGGCAGCACAAGAGGCTGATCGTGCAAAGTTACTCGCTCAAACAGTTCGGGAAGAGCTG
AGGAAGGCAAAGGAAGAGGCGGAGCAAGCAAAGGCAGCATCTATCACCGTGGAAAGTAGA
CTGCTTGCAGTAAAAAAAGAGATAGAGGCTGCAAAAGCTTCAGAGAAGTTGGCCATAGCG
GCTATCAGTGCTCTACAAGAGAGTGAATCAACCGAAAGCACAACAGATGAGACAACTGGA
GTAACACTTTCTTTAGAGGAGTATTATGAACTCAGCAAACAGGCCCATGAGGCAGAGAAA
CAAGCTAATACCAGGGTGTCTGCTGCTATGTCCCAAATAGAAGTAGCCAAGGAATCAGAG
TTGAGTAGTCTTAACAAGCTCGAGGAGGTTAATCTTGCGATGACTGAAAAGAAGGAAGCA
CTAGAAATCGCACTGCAAAAGGCCGAGAAAGCCAAAGAAGGAAAATTGGCAGCAGAGCAA
GAGCTGAGGAAATGGAGAGCGGAGCATGAGAAAAGACGGAAATCTGGTAAATCTGTTACC
CCGGTAAACAAAACAATGAGCTCAAAAACGAGCTTTGAGGAGGATAAAGAATCAAAAGCT
TCTGAGGCTGCAGTACCTCATCAAACCTTAAATCCAAAAGAAAATGTACAAACAAAGAGT
GAAACCGATTCATCTCAAGAAGTGAAGGTCACAAAGAAAAAGAAGAAGTCCTTCTTCCCC
CGCGTCTTAATGTTTCTGGGCAGAAAGAAAGCACAGGCCAAGGCAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027053
PEP Infomation

pacid=37446117 transcript=PGSC0003DMT400039921 locus=PGSC0003DMG400015441 ID=PGSC0003DMT400039921.v4.03 annot-version=v4.03
Sequence

MEDVKDLKQHAPESSPTPVVVVSSPDEDQSLSATQTSQNADEKANLENQQLNVDASEHVE
EATQSLSLEKSETHPTGASSTPMVDQEDSSQSVHSPKPSEPPIDKKSTALSETSPSSLSN
EKPSSSKEEEHIQSNHSGEDQASNSSPSSTKSADDSCSTSHVQETKPENNSHVESLDNID
KAPTLRIKIPGPTAQSKQPENVDVNRVNIDTAAPIQSVKQAVSKFGGIVDWKAHRQQTVE
RRNLIEQELTKVQEEIPLYKKQCQDAEDAKVLVLKELDSTKRLIEELKLNLERAQTEEQQ
ARQDSELATLRVEEMERGIADDSSIAAKAQLEVARARLEAAVSELKSVNSELDVLRMDYD
LLVSEKDVAVEKAEEAVSLSNEVEKTVEDLTIELITSKDALEAAHAAHLEAEEHRVGAAM
AREQDTLNWENELKQAEEELERLNHQILSAKDHKAKLDTASSLLQDLNTELAAYMESKLK
QEADEEGNMKGEQLETDKRSHHEIQAVVASAKKELEEVKLNIEKATAEVECLKVAAVALK
AELEKEKSELASIQQREGMAAIAITSLEAELNRTKSEISLLQIKEKEAREKMVELPKQLQ
EAAQEADRAKLLAQTVREELRKAKEEAEQAKAASITVESRLLAVKKEIEAAKASEKLAIA
AISALQESESTESTTDETTGVTLSLEEYYELSKQAHEAEKQANTRVSAAMSQIEVAKESE
LSSLNKLEEVNLAMTEKKEALEIALQKAEKAKEGKLAAEQELRKWRAEHEKRRKSGKSVT
PVNKTMSSKTSFEEDKESKASEAAVPHQTLNPKENVQTKSETDSSQEVKVTKKKKKSFFP
RVLMFLGRKKAQAKAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400039921
Transcript Infomation

pacid=37446117 locus=PGSC0003DMG400015441 ID=PGSC0003DMT400039921.v4.03 annot-version=v4.03
Sequence

ATGGAAGATGTTAAAGATCTGAAGCAACACGCTCCGGAGTCCTCTCCTACACCTGTTGTT
GTTGTTTCCTCTCCGGACGAGGATCAATCACTTAGTGCAACTCAAACCAGCCAAAATGCA
GATGAAAAAGCAAACTTGGAGAATCAGCAGCTGAACGTGGATGCTTCGGAGCATGTAGAA
GAGGCTACTCAAAGCTTGTCGTTGGAGAAGAGTGAGACTCATCCAACAGGAGCTTCTAGT
ACACCTATGGTTGATCAGGAAGACTCATCTCAATCTGTACATAGTCCTAAGCCATCGGAG
CCTCCTATCGATAAAAAATCAACAGCTTTATCCGAAACTAGTCCATCCTCTCTATCAAAT
GAAAAACCAAGTAGTTCCAAAGAGGAAGAACATATTCAATCTAATCATTCAGGAGAAGAT
CAAGCAAGTAATAGTTCTCCTAGTAGTACCAAAAGTGCTGATGATTCGTGTTCTACTTCC
CACGTCCAAGAGACGAAACCTGAAAATAATAGTCATGTAGAGTCATTGGATAACATTGAC
AAGGCTCCCACTCTCAGAATCAAGATCCCAGGACCTACTGCTCAGTCTAAGCAGCCTGAG
AACGTTGACGTAAACAGAGTTAATATCGATACAGCAGCACCAATCCAATCGGTGAAACAG
GCAGTTTCAAAGTTTGGAGGGATTGTCGACTGGAAGGCTCATAGACAACAGACAGTCGAG
AGACGGAATCTTATCGAGCAAGAACTAACAAAAGTGCAAGAGGAGATCCCATTGTATAAG
AAACAATGTCAGGATGCAGAAGATGCAAAAGTACTAGTTTTGAAAGAACTAGATAGCACT
AAGAGACTCATAGAAGAATTAAAGCTCAACCTAGAGAGAGCACAAACAGAAGAGCAACAA
GCAAGACAGGATTCAGAACTTGCCACGCTCAGGGTCGAAGAGATGGAGCGGGGTATTGCT
GATGACTCTAGTATTGCAGCTAAAGCACAGCTTGAAGTTGCCAGAGCTAGGCTTGAAGCT
GCAGTTTCAGAGCTAAAATCTGTTAACTCCGAATTAGATGTTCTCCGTATGGATTATGAT
TTATTGGTATCCGAAAAAGATGTTGCTGTGGAAAAAGCAGAAGAAGCTGTTTCGTTATCA
AATGAAGTTGAGAAGACAGTTGAGGATTTGACTATTGAGCTCATTACTTCAAAGGATGCT
TTGGAGGCTGCACATGCTGCACATCTAGAGGCCGAGGAACATAGAGTCGGAGCAGCTATG
GCAAGAGAGCAAGATACTCTAAACTGGGAGAACGAACTGAAGCAGGCGGAAGAAGAGCTT
GAGAGGCTAAACCATCAAATTCTGTCTGCAAAGGATCATAAAGCAAAATTAGATACTGCT
TCATCTTTGTTACAAGATCTCAACACTGAGTTAGCAGCTTATATGGAATCAAAGTTGAAA
CAGGAGGCTGATGAAGAAGGGAACATGAAAGGCGAGCAATTAGAGACGGATAAAAGAAGT
CATCATGAGATACAAGCAGTCGTGGCATCAGCTAAGAAGGAACTCGAAGAAGTGAAACTC
AACATTGAGAAAGCAACAGCTGAAGTAGAATGCCTGAAAGTAGCAGCAGTCGCATTAAAG
GCAGAATTGGAAAAGGAAAAATCAGAACTAGCTTCCATACAACAGAGAGAAGGAATGGCA
GCAATTGCCATTACATCTCTTGAAGCTGAGTTGAACCGAACAAAGTCAGAGATTTCCCTT
TTGCAGATAAAGGAAAAAGAAGCAAGAGAAAAGATGGTGGAGCTACCGAAGCAACTGCAA
GAGGCAGCACAAGAGGCTGATCGTGCAAAGTTACTCGCTCAAACAGTTCGGGAAGAGCTG
AGGAAGGCAAAGGAAGAGGCGGAGCAAGCAAAGGCAGCATCTATCACCGTGGAAAGTAGA
CTGCTTGCAGTAAAAAAAGAGATAGAGGCTGCAAAAGCTTCAGAGAAGTTGGCCATAGCG
GCTATCAGTGCTCTACAAGAGAGTGAATCAACCGAAAGCACAACAGATGAGACAACTGGA
GTAACACTTTCTTTAGAGGAGTATTATGAACTCAGCAAACAGGCCCATGAGGCAGAGAAA
CAAGCTAATACCAGGGTGTCTGCTGCTATGTCCCAAATAGAAGTAGCCAAGGAATCAGAG
TTGAGTAGTCTTAACAAGCTCGAGGAGGTTAATCTTGCGATGACTGAAAAGAAGGAAGCA
CTAGAAATCGCACTGCAAAAGGCCGAGAAAGCCAAAGAAGGAAAATTGGCAGCAGAGCAA
GAGCTGAGGAAATGGAGAGCGGAGCATGAGAAAAGACGGAAATCTGGTAAATCTGTTACC
CCGGTAAACAAAACAATGAGCTCAAAAACGAGCTTTGAGGAGGATAAAGAATCAAAAGCT
TCTGAGGCTGCAGTACCTCATCAAACCTTAAATCCAAAAGAAAATGTACAAACAAAGAGT
GAAACCGATTCATCTCAAGAAGTGAAGGTCACAAAGAAAAAGAAGAAGTCCTTCTTCCCC
CGCGTCTTAATGTTTCTGGGCAGAAAGAAAGCACAGGCCAAGGCAAGATGA