Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039914
CDS Infomation

pacid=37447115 polypeptide=PGSC0003DMP400027048 locus=PGSC0003DMG400015439 ID=PGSC0003DMT400039914.v4.03 annot-version=v4.03
Sequence

ATGGCACAAAAAAATGATCAAGTACTCCATGTAGTTTTCATTCCATACTTGACACCAAGT
CACATGATCCCTTTAGTTGATACATCTAGACTTTTTGCTAGTCATGGTGTCAAAGTTAGC
ATCATCACCACCCCCTACAATGCCCTCCTTTTCGAATCAACAATCGATCATGACATTGAT
TTAGGCCACAAAATCTTCATCCACAAACTCAAATTTCCATCTGATGAAGTAGGCTTACCA
GAAGGGATTGAAAACTTCAGTGTTACCACTAGTCAAGAAATGGCTATAGGTGTATTTATG
GGAATTGCTTTGCTTCAAAAACCAATGGAAAGTCTTATTTTCGAGCTACGTCCTCATTGC
ATTGTATCAGACATGTTTTTCCCATGGACTGTGGATGTAGCAGAGCAACTGAAGATTCCT
AGACTTACGTTTTATCCGACTAATGTTATGTACCATTGTGTTGAACATTGTTTGAAGTTG
TATACACCTCATGAGAAGGTAAGTTCGGATTCAGAATGTTTTAAGGTTCCGGGATTACCA
GATGAGATTGAAATGAAAAGATCTCAACTACCCGAAGATGTGAAAAACAACCCTGAAGGA
CCATATTGGGAGTTGTTGAAGAGAATTAAAGAATCAGAACCGCGGAGCTATGGTATGATT
CATGACACTATCTATGATCTAGAACCGAGTTATGCTGAGCTTTATCGAAAAATCAAAGGT
AAAAAGCCGTGGCTTATTGGACCTTCGTTTCATTTTTCAAAGAGAAACAATTCGAGAAGT
AGTCCAGATCAAGAGCGACATAGCTGCTTGAGTTGGCTTGATTCTCAAGAATCAAACTCT
GTTGTGTACATTTGTTTTGGAAGTATGGGAAGGTTTTCGGATCCTCAGCTTACTGAAATT
GCCTTAGCTCTTGAGGCCTCGAATTCGACCTTTCTTTGGGTGGTAAGAAAGGGAGATAAC
ACATATGAAAGTTGGCTCCCAATTGGGTTTGAGGAAAATATGTTTGCAAACAAGAAAGGT
TTGATAGTTAGAGGATGGGTGCCACAGCTGAAGATCTTGAACCATCCAGCAACCGGAGCG
TTCATGACTCACTGTGGCTGGAATTCCACTTTGGAGTCTCTTACATCCGGAGTGCCAATG
CTGACATGGCCATTGTTTGCGGAGCAGTTCTACAATGAGAAACTGGTGGAGGTACTTGGA
TGTGGAGTCAGGGTCGGGGCAGAGGTGTGGCATATTTCATTTGACATCACGGATACGATT
GTGAAGAAGGAGAAGATAGAGGCGAGTGTGAAAATGTTGATGAACGCCTCTAGGGAAAGT
GGAAAGATCAGAAGTAGAGGAAAAGACGTCGAAGCAATGATTAAGAGGGCTGTGGAGGAA
GGAGGTTCATCTTATAATCATCTAACTGCATTAATACAGGAGATGAAGTCTCATGCTTTT
GGCATATCAGAAGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400027048
PEP Infomation

pacid=37447115 transcript=PGSC0003DMT400039914 locus=PGSC0003DMG400015439 ID=PGSC0003DMT400039914.v4.03 annot-version=v4.03
Sequence

MAQKNDQVLHVVFIPYLTPSHMIPLVDTSRLFASHGVKVSIITTPYNALLFESTIDHDID
LGHKIFIHKLKFPSDEVGLPEGIENFSVTTSQEMAIGVFMGIALLQKPMESLIFELRPHC
IVSDMFFPWTVDVAEQLKIPRLTFYPTNVMYHCVEHCLKLYTPHEKVSSDSECFKVPGLP
DEIEMKRSQLPEDVKNNPEGPYWELLKRIKESEPRSYGMIHDTIYDLEPSYAELYRKIKG
KKPWLIGPSFHFSKRNNSRSSPDQERHSCLSWLDSQESNSVVYICFGSMGRFSDPQLTEI
ALALEASNSTFLWVVRKGDNTYESWLPIGFEENMFANKKGLIVRGWVPQLKILNHPATGA
FMTHCGWNSTLESLTSGVPMLTWPLFAEQFYNEKLVEVLGCGVRVGAEVWHISFDITDTI
VKKEKIEASVKMLMNASRESGKIRSRGKDVEAMIKRAVEEGGSSYNHLTALIQEMKSHAF
GISEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400039914
Transcript Infomation

pacid=37447115 locus=PGSC0003DMG400015439 ID=PGSC0003DMT400039914.v4.03 annot-version=v4.03
Sequence

ATGGCACAAAAAAATGATCAAGTACTCCATGTAGTTTTCATTCCATACTTGACACCAAGT
CACATGATCCCTTTAGTTGATACATCTAGACTTTTTGCTAGTCATGGTGTCAAAGTTAGC
ATCATCACCACCCCCTACAATGCCCTCCTTTTCGAATCAACAATCGATCATGACATTGAT
TTAGGCCACAAAATCTTCATCCACAAACTCAAATTTCCATCTGATGAAGTAGGCTTACCA
GAAGGGATTGAAAACTTCAGTGTTACCACTAGTCAAGAAATGGCTATAGGTGTATTTATG
GGAATTGCTTTGCTTCAAAAACCAATGGAAAGTCTTATTTTCGAGCTACGTCCTCATTGC
ATTGTATCAGACATGTTTTTCCCATGGACTGTGGATGTAGCAGAGCAACTGAAGATTCCT
AGACTTACGTTTTATCCGACTAATGTTATGTACCATTGTGTTGAACATTGTTTGAAGTTG
TATACACCTCATGAGAAGGTAAGTTCGGATTCAGAATGTTTTAAGGTTCCGGGATTACCA
GATGAGATTGAAATGAAAAGATCTCAACTACCCGAAGATGTGAAAAACAACCCTGAAGGA
CCATATTGGGAGTTGTTGAAGAGAATTAAAGAATCAGAACCGCGGAGCTATGGTATGATT
CATGACACTATCTATGATCTAGAACCGAGTTATGCTGAGCTTTATCGAAAAATCAAAGGT
AAAAAGCCGTGGCTTATTGGACCTTCGTTTCATTTTTCAAAGAGAAACAATTCGAGAAGT
AGTCCAGATCAAGAGCGACATAGCTGCTTGAGTTGGCTTGATTCTCAAGAATCAAACTCT
GTTGTGTACATTTGTTTTGGAAGTATGGGAAGGTTTTCGGATCCTCAGCTTACTGAAATT
GCCTTAGCTCTTGAGGCCTCGAATTCGACCTTTCTTTGGGTGGTAAGAAAGGGAGATAAC
ACATATGAAAGTTGGCTCCCAATTGGGTTTGAGGAAAATATGTTTGCAAACAAGAAAGGT
TTGATAGTTAGAGGATGGGTGCCACAGCTGAAGATCTTGAACCATCCAGCAACCGGAGCG
TTCATGACTCACTGTGGCTGGAATTCCACTTTGGAGTCTCTTACATCCGGAGTGCCAATG
CTGACATGGCCATTGTTTGCGGAGCAGTTCTACAATGAGAAACTGGTGGAGGTACTTGGA
TGTGGAGTCAGGGTCGGGGCAGAGGTGTGGCATATTTCATTTGACATCACGGATACGATT
GTGAAGAAGGAGAAGATAGAGGCGAGTGTGAAAATGTTGATGAACGCCTCTAGGGAAAGT
GGAAAGATCAGAAGTAGAGGAAAAGACGTCGAAGCAATGATTAAGAGGGCTGTGGAGGAA
GGAGGTTCATCTTATAATCATCTAACTGCATTAATACAGGAGATGAAGTCTCATGCTTTT
GGCATATCAGAAGAGTAA