Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039849
CDS Infomation

pacid=37446050 polypeptide=PGSC0003DMP400027003 locus=PGSC0003DMG400015408 ID=PGSC0003DMT400039849.v4.03 annot-version=v4.03
Sequence

ATGCAGGGGAAACAGAATACCGTTGGTTCCCTCCAAGAAACTTTAGGTTTTAATCATGGT
TCGACGCCTAGTGAAGGTGGTGTAGATCAGCAGATATGTTGGAATAGTTTGCAAAATTCT
GCACAGAATCACCTGCCAGATTATATGGTTTCTTCTAATGCGACTAATATTCCATTCTTC
AATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC
TCTATTGCACCGAATTGTGCAAGTCAGAGTGAGCAGAAAGCAGATCATGGATGGTCATCC
GCAATGACTACATATCATGAACCTTCACTAATCTGTAACGAACAGCAATGTGGGTCTTCT
AACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCAT
GAGATCAACAGAAATCCAGCATTTGAGGGGCGCAGTGACAACAATGACGATGGCTGTCAA
GTGATGGAGTGTACTCCATACAATTCTGTTAGACCAGGAAAAGAACGAATGTCATCTGCT
TGTACTTATTTAGGTAATGGGTGTTTGACGGATGATAGTGGTGATGGCAGGCCAGAAAGT
TCACCGGATTCTAGGCGCTTTTGTAAGAGAAAAACACTTGAAGGATATCTAGCACAATCT
TCAGGAAGTGGAAGTTCTGATTATATTCCTCTTGCTGAAAATAGCATATGGCATTCTGGA
CCTGCATCACATAGTATGAGTACAGATGCAAATATCTCTGCTCCAACAGAAAGTGTCAGA
AGCATCAATATGTCAGAGCATGTGATCCCAAGACTTGGGCTTACCATGGGAGGAGCCGCT
GCGGTAACTCCTGTTGGTACTCCGGCTTCAAGAAGTGCAGAAAGTTCTCATAGAAATTTC
AGGGTGAGGATTGATGGCTCACTCCAGCAAGATTATCTTCCCAGTAATATCTTTCCTGAT
GTGGATAATGTTGGAAATGTTAATCGGTCATCTGAACAGCAATTACCAGAGCTACTTCCT
AATATCCCTTTGGATTTGAGGTCTGTGCCTGCTGCAGACAGTGGAAATACTCAAAGGCAG
CCTGTTGTAATGCATGTTTCTTCTCTGCATCGACGTGCACAGACTAGGTGGAGTTCAGCA
TCAAGTTCCAGAACTGGCAGTTCATCAAGTTCTGCTCGAGAGAGAAATTCAGCAACATTT
GAAGAGCCTAACTCAAGAAGTGTGTCAAGAAACATCTCACAACATCCTATGTTCATACCT
TCAACTAATGGGAGAAACTTGAACCAAAATCCTGCCAGCTTGAATTTAGCTGGAAGAAAT
GTTTCTGTTGCTGGAAATGTCGCATCCAGTTCAGGGGTCCACACTTCTTCTCCTAATAGG
GTTCTCCACAGATCTCCTCAATATCACCGGAGGCTGTCAGAATTAGTCCGTAGATCTTTG
TTGTCTCCAGCTAGCACTGGATCTGGAGGTGTTAATGGTAATAGTCGTCCACTACGTTTG
AGTTCTCCTATCTCACAGGAGATGGCACTTCCTGGAAACCATGAGCATCGTACATCGAGT
GCACTGGAGCGACATCTTGATGATGCTATAGGACTCTCCAATTCCTCAAGGACTTTGACT
GCTGCACGGGAAGGAAGAAGTAGGCTAGTCACTGAGATTCGCCATGTATTAGATCTTATG
CGCAGGGGTGAAGGGCTAAGTGTTGAGGATGTTATGATCCTTGATCAGTCGGTCTTCTTT
GGGATGCCGGAGATTCAAGATCGCCACAGGGATATGCGTCTTGATGTTGATAATATGTCA
TACGAGGAGTTATTGGCACTCGGAGAGCGCATTGGGGATGTTTGCACCGGGCTTAGTGAA
GAAACTATTTCAAGTCGTTTGAAGCAGCGCAATTTTATTAGCATAAAAACAGAACAACCT
GAGGAAGCAGAACCATGCTGCATATGCCGGGAGGAATATAACAACGGAGATGGTCTTGGA
ACACTAGAGTGTGGACATGATTTCCATACAGACTGCATTAAGCAATGGCTCATGCAGAAG
AATTTATGCCCGGTATGCAAGACGACGGGGCTTACTACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400027003
PEP Infomation

pacid=37446050 transcript=PGSC0003DMT400039849 locus=PGSC0003DMG400015408 ID=PGSC0003DMT400039849.v4.03 annot-version=v4.03
Sequence

MQGKQNTVGSLQETLGFNHGSTPSEGGVDQQICWNSLQNSAQNHLPDYMVSSNATNIPFF
NPMSQERQNVTRGSLGESSSSIAPNCASQSEQKADHGWSSAMTTYHEPSLICNEQQCGSS
NIMSLNDFFSQGSSSSTIPHEINRNPAFEGRSDNNDDGCQVMECTPYNSVRPGKERMSSA
CTYLGNGCLTDDSGDGRPESSPDSRRFCKRKTLEGYLAQSSGSGSSDYIPLAENSIWHSG
PASHSMSTDANISAPTESVRSINMSEHVIPRLGLTMGGAAAVTPVGTPASRSAESSHRNF
RVRIDGSLQQDYLPSNIFPDVDNVGNVNRSSEQQLPELLPNIPLDLRSVPAADSGNTQRQ
PVVMHVSSLHRRAQTRWSSASSSRTGSSSSSARERNSATFEEPNSRSVSRNISQHPMFIP
STNGRNLNQNPASLNLAGRNVSVAGNVASSSGVHTSSPNRVLHRSPQYHRRLSELVRRSL
LSPASTGSGGVNGNSRPLRLSSPISQEMALPGNHEHRTSSALERHLDDAIGLSNSSRTLT
AAREGRSRLVTEIRHVLDLMRRGEGLSVEDVMILDQSVFFGMPEIQDRHRDMRLDVDNMS
YEELLALGERIGDVCTGLSEETISSRLKQRNFISIKTEQPEEAEPCCICREEYNNGDGLG
TLECGHDFHTDCIKQWLMQKNLCPVCKTTGLTT*

Transcript Sequence

Transcript ID

PGSC0003DMT400039849
Transcript Infomation

pacid=37446050 locus=PGSC0003DMG400015408 ID=PGSC0003DMT400039849.v4.03 annot-version=v4.03
Sequence

ATGCAGGGGAAACAGAATACCGTTGGTTCCCTCCAAGAAACTTTAGGTTTTAATCATGGT
TCGACGCCTAGTGAAGGTGGTGTAGATCAGCAGATATGTTGGAATAGTTTGCAAAATTCT
GCACAGAATCACCTGCCAGATTATATGGTTTCTTCTAATGCGACTAATATTCCATTCTTC
AATCCTATGAGCCAAGAGAGACAGAATGTAACCAGGGGGAGTTTAGGAGAATCCAGCTCC
TCTATTGCACCGAATTGTGCAAGTCAGAGTGAGCAGAAAGCAGATCATGGATGGTCATCC
GCAATGACTACATATCATGAACCTTCACTAATCTGTAACGAACAGCAATGTGGGTCTTCT
AACATTATGTCATTGAATGATTTTTTTTCTCAAGGTTCTAGTTCTAGCACCATTCCTCAT
GAGATCAACAGAAATCCAGCATTTGAGGGGCGCAGTGACAACAATGACGATGGCTGTCAA
GTGATGGAGTGTACTCCATACAATTCTGTTAGACCAGGAAAAGAACGAATGTCATCTGCT
TGTACTTATTTAGGTAATGGGTGTTTGACGGATGATAGTGGTGATGGCAGGCCAGAAAGT
TCACCGGATTCTAGGCGCTTTTGTAAGAGAAAAACACTTGAAGGATATCTAGCACAATCT
TCAGGAAGTGGAAGTTCTGATTATATTCCTCTTGCTGAAAATAGCATATGGCATTCTGGA
CCTGCATCACATAGTATGAGTACAGATGCAAATATCTCTGCTCCAACAGAAAGTGTCAGA
AGCATCAATATGTCAGAGCATGTGATCCCAAGACTTGGGCTTACCATGGGAGGAGCCGCT
GCGGTAACTCCTGTTGGTACTCCGGCTTCAAGAAGTGCAGAAAGTTCTCATAGAAATTTC
AGGGTGAGGATTGATGGCTCACTCCAGCAAGATTATCTTCCCAGTAATATCTTTCCTGAT
GTGGATAATGTTGGAAATGTTAATCGGTCATCTGAACAGCAATTACCAGAGCTACTTCCT
AATATCCCTTTGGATTTGAGGTCTGTGCCTGCTGCAGACAGTGGAAATACTCAAAGGCAG
CCTGTTGTAATGCATGTTTCTTCTCTGCATCGACGTGCACAGACTAGGTGGAGTTCAGCA
TCAAGTTCCAGAACTGGCAGTTCATCAAGTTCTGCTCGAGAGAGAAATTCAGCAACATTT
GAAGAGCCTAACTCAAGAAGTGTGTCAAGAAACATCTCACAACATCCTATGTTCATACCT
TCAACTAATGGGAGAAACTTGAACCAAAATCCTGCCAGCTTGAATTTAGCTGGAAGAAAT
GTTTCTGTTGCTGGAAATGTCGCATCCAGTTCAGGGGTCCACACTTCTTCTCCTAATAGG
GTTCTCCACAGATCTCCTCAATATCACCGGAGGCTGTCAGAATTAGTCCGTAGATCTTTG
TTGTCTCCAGCTAGCACTGGATCTGGAGGTGTTAATGGTAATAGTCGTCCACTACGTTTG
AGTTCTCCTATCTCACAGGAGATGGCACTTCCTGGAAACCATGAGCATCGTACATCGAGT
GCACTGGAGCGACATCTTGATGATGCTATAGGACTCTCCAATTCCTCAAGGACTTTGACT
GCTGCACGGGAAGGAAGAAGTAGGCTAGTCACTGAGATTCGCCATGTATTAGATCTTATG
CGCAGGGGTGAAGGGCTAAGTGTTGAGGATGTTATGATCCTTGATCAGTCGGTCTTCTTT
GGGATGCCGGAGATTCAAGATCGCCACAGGGATATGCGTCTTGATGTTGATAATATGTCA
TACGAGGAGTTATTGGCACTCGGAGAGCGCATTGGGGATGTTTGCACCGGGCTTAGTGAA
GAAACTATTTCAAGTCGTTTGAAGCAGCGCAATTTTATTAGCATAAAAACAGAACAACCT
GAGGAAGCAGAACCATGCTGCATATGCCGGGAGGAATATAACAACGGAGATGGTCTTGGA
ACACTAGAGTGTGGACATGATTTCCATACAGACTGCATTAAGCAATGGCTCATGCAGAAG
AATTTATGCCCGGTATGCAAGACGACGGGGCTTACTACATGA