Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039746
CDS Infomation

pacid=37446744 polypeptide=PGSC0003DMP400026930 locus=PGSC0003DMG400015361 ID=PGSC0003DMT400039746.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGCCGCCGTCTCGATGCATCTCTCAGAATTCCAAGAAAAGAGTGTTCCCTGGT
GGGAGCTCAACCGATGCGCAGGTGGCGGAAGTCTCGCCCCCGATTGCTTGGATTTCAAAA
TCAGAGAGTGCTAAACAGAAGGAGCCTATTCACCATGGAGATGTTGACATGAAAGGAGGT
GATAATGATGTGATGTTCATTGATGGGAATACTGGATCCCGTGGCAAAGGGAAGGATTTT
CTCGAGCTATCCCTTGGTTATGGTGGTTCAGAATATAGTGTTGGACCGAGTCAAGTTCAG
TCTTCGAAGAAGCACTGCCCTTCAGAATCAGGTGAAGTGCCTGCGAACCTTTTTTATGAA
GATGATCCGTCTATGGACATGTACTTTAATGACCTAGCACATCACGACTATGCCATTTTG
CAATCACATTTTGATCATATGGATACTCCACCTGGAGTTGAGGTTCCAATCCCATGGATG
TCTGGTTTTGCTAAAGCTAAATTGACATCAACCACTACAAGCACATCGTCCACTTCAAAA
GCTCTGAATTCTCCTTTTGGAAGAGAAACCCCTGAGGTACTAAAGTACCCGTCCACTTCA
TTTTATGACTTAAATCATGTTTTTAAGCCTACACCATTTGAGCTATCTTCGTCATCTCTG
GGACCTGCTGTTGTCAAGGGCAAATTTTCTGCCAAAGCAAACTCAAAGGGGATATGTTTT
AAAGAACAAAATGGTTCTACAAATGTTTCGCCCGGGGTAGAAAAATCTCTTAACATTCAA
GGGTCTCGTCTTAGAAGGAAGATCCATTTATCCCCTGGAACAGTTTCTCATAGTTGGCAT
ACTCCATCTATTCCTGGTGGAGCTCCGTTCCCTACAGCTCACTTTGTACCTCCACCAATG
CCTAGTTGGATGAATTTCCCCCCTAATATGCCAACTGCTCAAGCTTCTTCAGGGTTTATG
CTCGCACCAGGTGCTATGAACCCTCTCCCTCTGCATCAGGTTCATCCAGGGTTTATGCTT
GCACCAGGTGATATGAACTCTCTTCCACTGGAACAGGTTCATCCAGGGTATATTCTCCCA
CCAGATGCTATGAACTATTTTCTTCCAGAACAGCTTTCTACGGGGCCTGTTCTTGCACCA
GGTGCTATGCACTATTTCCATCAGGAAATGGATCATGAACTCTGGACGCATGGTCTGCAT
AACAGTGCAAGTCTATCACTCCAATGTGAATCAGCTCCTACTAAGGAACAACATGGAGAT
TTAGGTGAAAGTCTGAAGAATTTTCGTCTTTTCAAGAAATTTGATACTGTTCAAGATCAT
TCAGGCAATTACTTTTCTGGACTTGCATCTCATGACAACCAGGCCTCTAAGGGTTGTGCC
AAGAGGATACAGGAGGAGTGGAAGATACTGGAGAAAGATTTACCTGATACCATATTTGTC
CGGGTGTATGAAACAAGAATGGATCTGTTGAGAGCAGTAATTATTGGAGCTGATGGAACT
CCTTACCATGACGGTTTGTTCTTTTTTGATGTTTACTTCCCTAGCAACTATCCCAATGTT
CCACCGCATGTACACTACCATTCTTTTGGCCTTCGGATCAATCCAAACTTGTATGAGTGT
GGAAAAGTCTGCCTGAGCCTTCTTAACACTTGGGGTGGTAGAGGGAAGGAGAAATGGATC
CCTGGTGAATCAACTATGCTGCAAGTTTTGGTTTCCATACAAGGGCTAATATTGAACGCA
AAGCCCTATTTCAATGAGCCTGGATATGCCAAGATGAATGGCTCAGCCATAGGGGAACGA
AACTCACTGCGCTATAACGAGCACACTTGCATTTTTAATCTAAAGACAATGGTCTTTTGT
ATGAGGCGACCACCACAGCACTTTGAGGATTTTGTTATAGGGCATTACTTTCAAAGTTGT
CAAGATATTCTTGTGGCATGTAAAGCATATATGGAAGGTGCTCGTGTGGGTAGCCTTGTT
AGAGGGTGCGTTCTCGAGGCTGGTGGTGATAAAGGTTGTTCTCGGAGTTTCAAGGCCATG
TTGGCGGGATTCATCGAGGTACTTGTAGAGGCATTCAAAAAGATTGGTTGCGAGGATTGT
GATAAGTTTCTTCCCTTGGCAGAAAAGGCGTCAACCAGAGTAACTCCAGTTAAGATGGAG
ACTGCTGACCATATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400026930
PEP Infomation

pacid=37446744 transcript=PGSC0003DMT400039746 locus=PGSC0003DMG400015361 ID=PGSC0003DMT400039746.v4.03 annot-version=v4.03
Sequence

MELPPSRCISQNSKKRVFPGGSSTDAQVAEVSPPIAWISKSESAKQKEPIHHGDVDMKGG
DNDVMFIDGNTGSRGKGKDFLELSLGYGGSEYSVGPSQVQSSKKHCPSESGEVPANLFYE
DDPSMDMYFNDLAHHDYAILQSHFDHMDTPPGVEVPIPWMSGFAKAKLTSTTTSTSSTSK
ALNSPFGRETPEVLKYPSTSFYDLNHVFKPTPFELSSSSLGPAVVKGKFSAKANSKGICF
KEQNGSTNVSPGVEKSLNIQGSRLRRKIHLSPGTVSHSWHTPSIPGGAPFPTAHFVPPPM
PSWMNFPPNMPTAQASSGFMLAPGAMNPLPLHQVHPGFMLAPGDMNSLPLEQVHPGYILP
PDAMNYFLPEQLSTGPVLAPGAMHYFHQEMDHELWTHGLHNSASLSLQCESAPTKEQHGD
LGESLKNFRLFKKFDTVQDHSGNYFSGLASHDNQASKGCAKRIQEEWKILEKDLPDTIFV
RVYETRMDLLRAVIIGADGTPYHDGLFFFDVYFPSNYPNVPPHVHYHSFGLRINPNLYEC
GKVCLSLLNTWGGRGKEKWIPGESTMLQVLVSIQGLILNAKPYFNEPGYAKMNGSAIGER
NSLRYNEHTCIFNLKTMVFCMRRPPQHFEDFVIGHYFQSCQDILVACKAYMEGARVGSLV
RGCVLEAGGDKGCSRSFKAMLAGFIEVLVEAFKKIGCEDCDKFLPLAEKASTRVTPVKME
TADHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400039746
Transcript Infomation

pacid=37446744 locus=PGSC0003DMG400015361 ID=PGSC0003DMT400039746.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGCCGCCGTCTCGATGCATCTCTCAGAATTCCAAGAAAAGAGTGTTCCCTGGT
GGGAGCTCAACCGATGCGCAGGTGGCGGAAGTCTCGCCCCCGATTGCTTGGATTTCAAAA
TCAGAGAGTGCTAAACAGAAGGAGCCTATTCACCATGGAGATGTTGACATGAAAGGAGGT
GATAATGATGTGATGTTCATTGATGGGAATACTGGATCCCGTGGCAAAGGGAAGGATTTT
CTCGAGCTATCCCTTGGTTATGGTGGTTCAGAATATAGTGTTGGACCGAGTCAAGTTCAG
TCTTCGAAGAAGCACTGCCCTTCAGAATCAGGTGAAGTGCCTGCGAACCTTTTTTATGAA
GATGATCCGTCTATGGACATGTACTTTAATGACCTAGCACATCACGACTATGCCATTTTG
CAATCACATTTTGATCATATGGATACTCCACCTGGAGTTGAGGTTCCAATCCCATGGATG
TCTGGTTTTGCTAAAGCTAAATTGACATCAACCACTACAAGCACATCGTCCACTTCAAAA
GCTCTGAATTCTCCTTTTGGAAGAGAAACCCCTGAGGTACTAAAGTACCCGTCCACTTCA
TTTTATGACTTAAATCATGTTTTTAAGCCTACACCATTTGAGCTATCTTCGTCATCTCTG
GGACCTGCTGTTGTCAAGGGCAAATTTTCTGCCAAAGCAAACTCAAAGGGGATATGTTTT
AAAGAACAAAATGGTTCTACAAATGTTTCGCCCGGGGTAGAAAAATCTCTTAACATTCAA
GGGTCTCGTCTTAGAAGGAAGATCCATTTATCCCCTGGAACAGTTTCTCATAGTTGGCAT
ACTCCATCTATTCCTGGTGGAGCTCCGTTCCCTACAGCTCACTTTGTACCTCCACCAATG
CCTAGTTGGATGAATTTCCCCCCTAATATGCCAACTGCTCAAGCTTCTTCAGGGTTTATG
CTCGCACCAGGTGCTATGAACCCTCTCCCTCTGCATCAGGTTCATCCAGGGTTTATGCTT
GCACCAGGTGATATGAACTCTCTTCCACTGGAACAGGTTCATCCAGGGTATATTCTCCCA
CCAGATGCTATGAACTATTTTCTTCCAGAACAGCTTTCTACGGGGCCTGTTCTTGCACCA
GGTGCTATGCACTATTTCCATCAGGAAATGGATCATGAACTCTGGACGCATGGTCTGCAT
AACAGTGCAAGTCTATCACTCCAATGTGAATCAGCTCCTACTAAGGAACAACATGGAGAT
TTAGGTGAAAGTCTGAAGAATTTTCGTCTTTTCAAGAAATTTGATACTGTTCAAGATCAT
TCAGGCAATTACTTTTCTGGACTTGCATCTCATGACAACCAGGCCTCTAAGGGTTGTGCC
AAGAGGATACAGGAGGAGTGGAAGATACTGGAGAAAGATTTACCTGATACCATATTTGTC
CGGGTGTATGAAACAAGAATGGATCTGTTGAGAGCAGTAATTATTGGAGCTGATGGAACT
CCTTACCATGACGGTTTGTTCTTTTTTGATGTTTACTTCCCTAGCAACTATCCCAATGTT
CCACCGCATGTACACTACCATTCTTTTGGCCTTCGGATCAATCCAAACTTGTATGAGTGT
GGAAAAGTCTGCCTGAGCCTTCTTAACACTTGGGGTGGTAGAGGGAAGGAGAAATGGATC
CCTGGTGAATCAACTATGCTGCAAGTTTTGGTTTCCATACAAGGGCTAATATTGAACGCA
AAGCCCTATTTCAATGAGCCTGGATATGCCAAGATGAATGGCTCAGCCATAGGGGAACGA
AACTCACTGCGCTATAACGAGCACACTTGCATTTTTAATCTAAAGACAATGGTCTTTTGT
ATGAGGCGACCACCACAGCACTTTGAGGATTTTGTTATAGGGCATTACTTTCAAAGTTGT
CAAGATATTCTTGTGGCATGTAAAGCATATATGGAAGGTGCTCGTGTGGGTAGCCTTGTT
AGAGGGTGCGTTCTCGAGGCTGGTGGTGATAAAGGTTGTTCTCGGAGTTTCAAGGCCATG
TTGGCGGGATTCATCGAGGTACTTGTAGAGGCATTCAAAAAGATTGGTTGCGAGGATTGT
GATAAGTTTCTTCCCTTGGCAGAAAAGGCGTCAACCAGAGTAACTCCAGTTAAGATGGAG
ACTGCTGACCATATATAG