Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039714
CDS Infomation

pacid=37446158 polypeptide=PGSC0003DMP400026914 locus=PGSC0003DMG400015349 ID=PGSC0003DMT400039714.v4.03 annot-version=v4.03
Sequence

ATGGGAATTCTGTTTTTCTTTTATTCACTTGTCTGTTTTTTGTTGGTAATTAGTGAAAGC
TTTTCTTCTTCCTCTGTGATGATGCATCATGTTTGCTCTCCCACTGAAGCTTTTGCTTTG
CTTCACTTCAAACAATCTTTTCAAATCTCTAACCAACCTAGCTGTTGGGTTGAGATTAAT
CTGCCAGATATGACCTTTGTTGATATCCCAAAAACAAAGTCTTGGAATGAGAGTAGGGAT
TGCTGCAGTTGGGACGGGGTAACTTGTGACATGTTAACCGGTCATGTTATCGGATTGGAC
CTTAGTTGCAGTCTGCTTAATGGAACTATTCATCCCAATAGCAGCCTCTTCCAACTCCAT
CATCTCCAGACACTAAACCTTGCTCGCAATGACTTCTATTCTTCTTCAATCCCACATAAC
ATTGGCCGATTGACGAATTTGAGGCATCTCAACCTTTCTCAATCTTTCTTTGTAGGGGAA
ATTCCAACAGAAATATCATACCTTTCCAATTTGGTTTCACTTGAACTTAATTGTTATGAA
TGTGAACTTGATGAGAGAACATTTGAAACAATTCTTCAAAACTTCACAAATCTGGAGGTA
GTTTCTCTCTGTGGTGTCAACATCTCATCTTCAATACCTGTGAATATTTCTTCTTTCTCC
TTAAGGTACGTGGATCTTAGACATACTAATCTGCGAGGTTTTATCACAGAGAGCTTTTTC
CTTCTGCCAGGATTGGAAAGGCTCTATTTGAGTGACAATGATCTTCTCAAAGGAGTTTTA
CCAAAGATCCACCCGAGCAACACTCTGTTGGAGCTGGATATTTCATTCACAGGAATCTCC
GGTGAGCTGCCTGATTCAATTGGCACCTTGAGTTCCTTGAATATCTTGAATTTTCTTAAT
AATCATTTCACCGGCTATATTCCTTCCACAATCTCTAAATTGAAGCACCTCACATCCCTA
GATCTCTCGTCCAACTCCTTTTCAGGTGAAATTCCCGATATTTTTTCTAACCTCCAAGAG
CTACGTTTTTTATATCTTCATAACAACAGCTTCATCGGTTCGTTTCCTTCTACAATTGTA
AGCTTGACACATCTTCAAGACTTAGACTTGTCGAGTAATTCCCTATCTGGCCCACTGCCT
AATAATGTGAGCATGCCTCAAGAGCTAACCAAACTGGATCTGTCGTACAACTCACTGAAT
GGTACCATACCATCTTCGGTGTTTAGCCTCCCTTTGCTATCTTCATTGTCTCTCCAACAT
AATCAATTTAGTGGACTAGCCGATGAGTTCAAAACAAACTCAACATTAGATTACCTAGAT
TTAAGCCATAATCAACTCAGTGGTTCATTTCCTCAATCACTTGCGAGTCTCACAAACCTT
TCTACCCTCACCCTTTCATCAAATAACATCACCTTCGATGAGGGAATACACATCACTTTT
CCTAGCCTACAAGATTTGCATTTATCGTCTTGTGAACTGAAGGATTTTCCACACTTCTTG
AGAAATGTAAAGACACTTACGGTCTTGGATATTTCTAACAATAAGATTCGTGGCCAAATC
CCAAACTGGTTTAGTAGCATAAGGTGGGACTACTTGTACTACCTAAATCTTTCGCATAAT
TCTTTAACAGGCCACCTACAACAATTTCATTTCCATAATCTAAGGTATCTTGATCTTAAA
TTTAACTCCCTTCAGGGTCCACTCTCTTCATCCATTTGTAACATGAGCGATCTTAAATTT
CTAGATTTATCACTCAACAACTTCAGTAACTTGATTCCAAGTTGCTTGGGAAATCTTCAA
TTTCTAGATTTATCACGCAACGACTTCAGTAACTCGATTCCAAGTTGCTTGGGAAGCATG
TCTAGTCTAACAGTGTTGGACTTAAGAAGGAACAATTTCACAGGGAGTCTTCCCCCATTA
TGTGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400026914
PEP Infomation

pacid=37446158 transcript=PGSC0003DMT400039714 locus=PGSC0003DMG400015349 ID=PGSC0003DMT400039714.v4.03 annot-version=v4.03
Sequence

MGILFFFYSLVCFLLVISESFSSSSVMMHHVCSPTEAFALLHFKQSFQISNQPSCWVEIN
LPDMTFVDIPKTKSWNESRDCCSWDGVTCDMLTGHVIGLDLSCSLLNGTIHPNSSLFQLH
HLQTLNLARNDFYSSSIPHNIGRLTNLRHLNLSQSFFVGEIPTEISYLSNLVSLELNCYE
CELDERTFETILQNFTNLEVVSLCGVNISSSIPVNISSFSLRYVDLRHTNLRGFITESFF
LLPGLERLYLSDNDLLKGVLPKIHPSNTLLELDISFTGISGELPDSIGTLSSLNILNFLN
NHFTGYIPSTISKLKHLTSLDLSSNSFSGEIPDIFSNLQELRFLYLHNNSFIGSFPSTIV
SLTHLQDLDLSSNSLSGPLPNNVSMPQELTKLDLSYNSLNGTIPSSVFSLPLLSSLSLQH
NQFSGLADEFKTNSTLDYLDLSHNQLSGSFPQSLASLTNLSTLTLSSNNITFDEGIHITF
PSLQDLHLSSCELKDFPHFLRNVKTLTVLDISNNKIRGQIPNWFSSIRWDYLYYLNLSHN
SLTGHLQQFHFHNLRYLDLKFNSLQGPLSSSICNMSDLKFLDLSLNNFSNLIPSCLGNLQ
FLDLSRNDFSNSIPSCLGSMSSLTVLDLRRNNFTGSLPPLCA*

Transcript Sequence

Transcript ID

PGSC0003DMT400039714
Transcript Infomation

pacid=37446158 locus=PGSC0003DMG400015349 ID=PGSC0003DMT400039714.v4.03 annot-version=v4.03
Sequence

ATGGGAATTCTGTTTTTCTTTTATTCACTTGTCTGTTTTTTGTTGGTAATTAGTGAAAGC
TTTTCTTCTTCCTCTGTGATGATGCATCATGTTTGCTCTCCCACTGAAGCTTTTGCTTTG
CTTCACTTCAAACAATCTTTTCAAATCTCTAACCAACCTAGCTGTTGGGTTGAGATTAAT
CTGCCAGATATGACCTTTGTTGATATCCCAAAAACAAAGTCTTGGAATGAGAGTAGGGAT
TGCTGCAGTTGGGACGGGGTAACTTGTGACATGTTAACCGGTCATGTTATCGGATTGGAC
CTTAGTTGCAGTCTGCTTAATGGAACTATTCATCCCAATAGCAGCCTCTTCCAACTCCAT
CATCTCCAGACACTAAACCTTGCTCGCAATGACTTCTATTCTTCTTCAATCCCACATAAC
ATTGGCCGATTGACGAATTTGAGGCATCTCAACCTTTCTCAATCTTTCTTTGTAGGGGAA
ATTCCAACAGAAATATCATACCTTTCCAATTTGGTTTCACTTGAACTTAATTGTTATGAA
TGTGAACTTGATGAGAGAACATTTGAAACAATTCTTCAAAACTTCACAAATCTGGAGGTA
GTTTCTCTCTGTGGTGTCAACATCTCATCTTCAATACCTGTGAATATTTCTTCTTTCTCC
TTAAGGTACGTGGATCTTAGACATACTAATCTGCGAGGTTTTATCACAGAGAGCTTTTTC
CTTCTGCCAGGATTGGAAAGGCTCTATTTGAGTGACAATGATCTTCTCAAAGGAGTTTTA
CCAAAGATCCACCCGAGCAACACTCTGTTGGAGCTGGATATTTCATTCACAGGAATCTCC
GGTGAGCTGCCTGATTCAATTGGCACCTTGAGTTCCTTGAATATCTTGAATTTTCTTAAT
AATCATTTCACCGGCTATATTCCTTCCACAATCTCTAAATTGAAGCACCTCACATCCCTA
GATCTCTCGTCCAACTCCTTTTCAGGTGAAATTCCCGATATTTTTTCTAACCTCCAAGAG
CTACGTTTTTTATATCTTCATAACAACAGCTTCATCGGTTCGTTTCCTTCTACAATTGTA
AGCTTGACACATCTTCAAGACTTAGACTTGTCGAGTAATTCCCTATCTGGCCCACTGCCT
AATAATGTGAGCATGCCTCAAGAGCTAACCAAACTGGATCTGTCGTACAACTCACTGAAT
GGTACCATACCATCTTCGGTGTTTAGCCTCCCTTTGCTATCTTCATTGTCTCTCCAACAT
AATCAATTTAGTGGACTAGCCGATGAGTTCAAAACAAACTCAACATTAGATTACCTAGAT
TTAAGCCATAATCAACTCAGTGGTTCATTTCCTCAATCACTTGCGAGTCTCACAAACCTT
TCTACCCTCACCCTTTCATCAAATAACATCACCTTCGATGAGGGAATACACATCACTTTT
CCTAGCCTACAAGATTTGCATTTATCGTCTTGTGAACTGAAGGATTTTCCACACTTCTTG
AGAAATGTAAAGACACTTACGGTCTTGGATATTTCTAACAATAAGATTCGTGGCCAAATC
CCAAACTGGTTTAGTAGCATAAGGTGGGACTACTTGTACTACCTAAATCTTTCGCATAAT
TCTTTAACAGGCCACCTACAACAATTTCATTTCCATAATCTAAGGTATCTTGATCTTAAA
TTTAACTCCCTTCAGGGTCCACTCTCTTCATCCATTTGTAACATGAGCGATCTTAAATTT
CTAGATTTATCACTCAACAACTTCAGTAACTTGATTCCAAGTTGCTTGGGAAATCTTCAA
TTTCTAGATTTATCACGCAACGACTTCAGTAACTCGATTCCAAGTTGCTTGGGAAGCATG
TCTAGTCTAACAGTGTTGGACTTAAGAAGGAACAATTTCACAGGGAGTCTTCCCCCATTA
TGTGCATAG