Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039676
CDS Infomation

pacid=37448799 polypeptide=PGSC0003DMP400026905 locus=PGSC0003DMG400015344 ID=PGSC0003DMT400039676.v4.03 annot-version=v4.03
Sequence

ATGGAACAAGAGATGGAGAATATAGAGAGTCCTCTACACATTCATCATTCTAAAAGTGAA
GTTATCTTTGACAACACTAATCGTCCCATCACTCTTAAGTTTGAGAATGTTGCTTACAAG
ATTAAGCTTGTAAAAGAAGGGTGTTTGAAGAATTCATCAAAATCAGAGGAGGAGAAAATA
ATCTTGAAGGATGTCTCGGGGATCGTTTATCCAGGAGAAATGCTGGCGATATTAGGCCCT
TCAGGATGTGGAAAAACAACTCTGCTAACAGGACTCGGAGGCAGGCTCGTTAAGGGCCAT
CTAGATGGCGTTATAACGTACAATAATAACCCCTTTTCTAGTTCCATGAAGCGTAGTATT
GGTTTTGTTACTCAAGATGATGTTCTTTATCCTCACCTTACAGTGTACGAAACGCTTGTG
TTCACTGCCCTCCTCCGTTTGCCTAAAACTTATTCAGTTGAGGAAAAAACCGCGCATTGT
GATGCAATTATACCTCAACTTGGATTAACAAAGTGCAAGGATAGCATCATTGGAGATTCG
CTTTTGAGAGGGATATCCGGTGGGGAGAGGAAAAGAGTAAGTATTGGGCAAGAAATGCTT
ATCAATCCGAGTTTATTGCTCTTGGATGAACCAACATCGGGGCTTGATTCTACTACAGCT
TTAAGGATTGTGTCTACGTTAAAAGATTTAGCAAACGGTGGCAGGACAGTTGCAATGACA
ATACATCAGCCTTCTAGTAGGCTATTTTACATGTTCGACAAAGTGTTGCTGTTATCCGAA
GGAAATCCCCTGTATTTTGGCAGAGGTAAAGATGCAATGGGATATTTTTCAGGCATCGGA
TTTCCCCCGTTAGTTGCTATGAATCCATCGGACTTCTTATTGGATCTATCAAGTGGTATA
CTATCTGATGATCCTCGCGTATTATCTGATGCTCCTAGAGAAGATCCAGCATCAATCAAA
CAAACTTTGGTAACTGCTTTCAAAACCAATCTAGCGAAGAACTTGAACGAACAGTTGCAA
GAATCTATTGATCACCAGGCAACTGAAAAATTACCTGAAAAGAAATTCAGTCAATGGTCG
AATACATGGTGGCAGCAATTCTCAGTGTTATTGAGAAGAGGGATGAAAGAACGAAAACAC
GAGTCCTTATCTAACCTTAAGGTTGGAGAAGTCTTGGTGATGTCTTTCTTCAGTGGATTG
TTATGGTGGAAATCTAACAACATTCAAGATCAGACAGGCCTTCTGTTCTTCTACACTAGT
TTCTGGGAGTTTTATTCTGTGTTCCAAGGTATTTTTACCTTCCCACAAGAAAGGATGATG
CTGGAGAAAGAAAGATCATCTGGCATGTATAGGCTCTCCGCGTACTTTATGGCTATGACT
GTAGGTGATCTTCCGATGGAGCTAGTCCTTCCGACTATTTCCACTGTTATAACATACTGG
ATGGCTGGCCTAAAACCATCCGCGGGGAGGTTCTTCTCTACTTTATTCAGCCTCCTCTAC
AATGTATTAGTCTCCCAAAGCCTTGGACTTGCTATTGGTGCAATGGTCATGGACGAAAAG
TCAGCTACTGTACTCGCTTTAGTCATCTTGATATCGTTTACCTTAGCTGGAGGGTTCTAT
GTTCAGCATGTCCCGAGGTTCATTGCCTGGATAAAGCACGTATCAATAACTCAGTACGCG
TACAAGCTCTTGTTGGGGTCTCAATATAGTCCGGGGGAAACGTATTCATGTGGCCTAAAC
GCGACGTGTCTGGTTGAAGATTCTCCTTCCATAAAAACTATAGGGCTTGGAGGTAAAGGC
ATCTCAATTGTTGCATTGGCTGTTATGCTTTTTGGTTTTAGGTTCTTGGCTTATGTTGCT
CTTATGAGGATTGGTGTGACAAAGAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400026905
PEP Infomation

pacid=37448799 transcript=PGSC0003DMT400039676 locus=PGSC0003DMG400015344 ID=PGSC0003DMT400039676.v4.03 annot-version=v4.03
Sequence

MEQEMENIESPLHIHHSKSEVIFDNTNRPITLKFENVAYKIKLVKEGCLKNSSKSEEEKI
ILKDVSGIVYPGEMLAILGPSGCGKTTLLTGLGGRLVKGHLDGVITYNNNPFSSSMKRSI
GFVTQDDVLYPHLTVYETLVFTALLRLPKTYSVEEKTAHCDAIIPQLGLTKCKDSIIGDS
LLRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTALRIVSTLKDLANGGRTVAMT
IHQPSSRLFYMFDKVLLLSEGNPLYFGRGKDAMGYFSGIGFPPLVAMNPSDFLLDLSSGI
LSDDPRVLSDAPREDPASIKQTLVTAFKTNLAKNLNEQLQESIDHQATEKLPEKKFSQWS
NTWWQQFSVLLRRGMKERKHESLSNLKVGEVLVMSFFSGLLWWKSNNIQDQTGLLFFYTS
FWEFYSVFQGIFTFPQERMMLEKERSSGMYRLSAYFMAMTVGDLPMELVLPTISTVITYW
MAGLKPSAGRFFSTLFSLLYNVLVSQSLGLAIGAMVMDEKSATVLALVILISFTLAGGFY
VQHVPRFIAWIKHVSITQYAYKLLLGSQYSPGETYSCGLNATCLVEDSPSIKTIGLGGKG
ISIVALAVMLFGFRFLAYVALMRIGVTKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400039676
Transcript Infomation

pacid=37448799 locus=PGSC0003DMG400015344 ID=PGSC0003DMT400039676.v4.03 annot-version=v4.03
Sequence

ATGGAACAAGAGATGGAGAATATAGAGAGTCCTCTACACATTCATCATTCTAAAAGTGAA
GTTATCTTTGACAACACTAATCGTCCCATCACTCTTAAGTTTGAGAATGTTGCTTACAAG
ATTAAGCTTGTAAAAGAAGGGTGTTTGAAGAATTCATCAAAATCAGAGGAGGAGAAAATA
ATCTTGAAGGATGTCTCGGGGATCGTTTATCCAGGAGAAATGCTGGCGATATTAGGCCCT
TCAGGATGTGGAAAAACAACTCTGCTAACAGGACTCGGAGGCAGGCTCGTTAAGGGCCAT
CTAGATGGCGTTATAACGTACAATAATAACCCCTTTTCTAGTTCCATGAAGCGTAGTATT
GGTTTTGTTACTCAAGATGATGTTCTTTATCCTCACCTTACAGTGTACGAAACGCTTGTG
TTCACTGCCCTCCTCCGTTTGCCTAAAACTTATTCAGTTGAGGAAAAAACCGCGCATTGT
GATGCAATTATACCTCAACTTGGATTAACAAAGTGCAAGGATAGCATCATTGGAGATTCG
CTTTTGAGAGGGATATCCGGTGGGGAGAGGAAAAGAGTAAGTATTGGGCAAGAAATGCTT
ATCAATCCGAGTTTATTGCTCTTGGATGAACCAACATCGGGGCTTGATTCTACTACAGCT
TTAAGGATTGTGTCTACGTTAAAAGATTTAGCAAACGGTGGCAGGACAGTTGCAATGACA
ATACATCAGCCTTCTAGTAGGCTATTTTACATGTTCGACAAAGTGTTGCTGTTATCCGAA
GGAAATCCCCTGTATTTTGGCAGAGGTAAAGATGCAATGGGATATTTTTCAGGCATCGGA
TTTCCCCCGTTAGTTGCTATGAATCCATCGGACTTCTTATTGGATCTATCAAGTGGTATA
CTATCTGATGATCCTCGCGTATTATCTGATGCTCCTAGAGAAGATCCAGCATCAATCAAA
CAAACTTTGGTAACTGCTTTCAAAACCAATCTAGCGAAGAACTTGAACGAACAGTTGCAA
GAATCTATTGATCACCAGGCAACTGAAAAATTACCTGAAAAGAAATTCAGTCAATGGTCG
AATACATGGTGGCAGCAATTCTCAGTGTTATTGAGAAGAGGGATGAAAGAACGAAAACAC
GAGTCCTTATCTAACCTTAAGGTTGGAGAAGTCTTGGTGATGTCTTTCTTCAGTGGATTG
TTATGGTGGAAATCTAACAACATTCAAGATCAGACAGGCCTTCTGTTCTTCTACACTAGT
TTCTGGGAGTTTTATTCTGTGTTCCAAGGTATTTTTACCTTCCCACAAGAAAGGATGATG
CTGGAGAAAGAAAGATCATCTGGCATGTATAGGCTCTCCGCGTACTTTATGGCTATGACT
GTAGGTGATCTTCCGATGGAGCTAGTCCTTCCGACTATTTCCACTGTTATAACATACTGG
ATGGCTGGCCTAAAACCATCCGCGGGGAGGTTCTTCTCTACTTTATTCAGCCTCCTCTAC
AATGTATTAGTCTCCCAAAGCCTTGGACTTGCTATTGGTGCAATGGTCATGGACGAAAAG
TCAGCTACTGTACTCGCTTTAGTCATCTTGATATCGTTTACCTTAGCTGGAGGGTTCTAT
GTTCAGCATGTCCCGAGGTTCATTGCCTGGATAAAGCACGTATCAATAACTCAGTACGCG
TACAAGCTCTTGTTGGGGTCTCAATATAGTCCGGGGGAAACGTATTCATGTGGCCTAAAC
GCGACGTGTCTGGTTGAAGATTCTCCTTCCATAAAAACTATAGGGCTTGGAGGTAAAGGC
ATCTCAATTGTTGCATTGGCTGTTATGCTTTTTGGTTTTAGGTTCTTGGCTTATGTTGCT
CTTATGAGGATTGGTGTGACAAAGAAATAG