Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039670
CDS Infomation

pacid=37448645 polypeptide=PGSC0003DMP400026903 locus=PGSC0003DMG400015342 ID=PGSC0003DMT400039670.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTCAGATTT
TATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGAT
TTTCCTCTACAGATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCA
AGTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTAT
CCGAATGGATCTAGACCGAATAGAGTAGCAGGTTCCGGTTATTGGAAAGCAACGGGAACG
GATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTAT
GTGGGTAAAGCTCCAAAAGGATCTAAGACAAATTGGATTATGCATGAATATCGACTTTTT
GAATCTTCAAGGAAAAATAATGGAAGTTCAAAGCTAGATGAATGGGTGCTTTGTCGCATT
TATAAGAAGAATTCAAGTGGACCAAAACCTCTTATGTCTGGTTTACACAGCAGCAATGAG
TACAGCCACGGTTCATCGACTTCGTCCTCATCCCAATTCGATGATATGCTTGAATCGTTA
CCAGAAATGGATGATCGATTCTCCAATTTACCGAGATTAAACTCTCTTAAGACCGAGAAA
TTGAACCTTGAACGCCTGGATTCAGCCAATTTCGATTGGGCAATCCTTGCTGGGCTCAAA
CCAATGCCGGAATTGCACCCAGCAAATCAAGCTTCAGGCGTTCAGGGTCAGGCTCAGGGG
AATGTCAATAACCACATCCACAACCACAACAACAACAATATGAATTTTCTCAACGATGTT
TATGCCCATCCTACTACGAATTTCCGAGGCAACACCAAGGTTGAAAGTATTAATCTAGAC
GAAGAAGTTGAAAGCGGGAACAGAAATCAACGGATTGATCAATCGAGTTACTTCCAGCAG
AGTCTGAATGGATTTTCCCAAGCGTATACGAACAGTGTTGATCAATTTGGAATCCAATGT
CCGAACCAGACGTTAAATCTGGGGTTCAGGCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026903
PEP Infomation

pacid=37448645 transcript=PGSC0003DMT400039670 locus=PGSC0003DMG400015342 ID=PGSC0003DMT400039670.v4.03 annot-version=v4.03
Sequence

MGVQEKDPLLQLSLPPGFRFYPTDEELLVQYLCKKVAGHDFPLQIIGEIDLYKFDPWVLP
SKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSQGRKVGIKKALVFY
VGKAPKGSKTNWIMHEYRLFESSRKNNGSSKLDEWVLCRIYKKNSSGPKPLMSGLHSSNE
YSHGSSTSSSSQFDDMLESLPEMDDRFSNLPRLNSLKTEKLNLERLDSANFDWAILAGLK
PMPELHPANQASGVQGQAQGNVNNHIHNHNNNNMNFLNDVYAHPTTNFRGNTKVESINLD
EEVESGNRNQRIDQSSYFQQSLNGFSQAYTNSVDQFGIQCPNQTLNLGFRQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400039670
Transcript Infomation

pacid=37448645 locus=PGSC0003DMG400015342 ID=PGSC0003DMT400039670.v4.03 annot-version=v4.03
Sequence

ATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTCAGATTT
TATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGAT
TTTCCTCTACAGATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCA
AGTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTAT
CCGAATGGATCTAGACCGAATAGAGTAGCAGGTTCCGGTTATTGGAAAGCAACGGGAACG
GATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTAT
GTGGGTAAAGCTCCAAAAGGATCTAAGACAAATTGGATTATGCATGAATATCGACTTTTT
GAATCTTCAAGGAAAAATAATGGAAGTTCAAAGCTAGATGAATGGGTGCTTTGTCGCATT
TATAAGAAGAATTCAAGTGGACCAAAACCTCTTATGTCTGGTTTACACAGCAGCAATGAG
TACAGCCACGGTTCATCGACTTCGTCCTCATCCCAATTCGATGATATGCTTGAATCGTTA
CCAGAAATGGATGATCGATTCTCCAATTTACCGAGATTAAACTCTCTTAAGACCGAGAAA
TTGAACCTTGAACGCCTGGATTCAGCCAATTTCGATTGGGCAATCCTTGCTGGGCTCAAA
CCAATGCCGGAATTGCACCCAGCAAATCAAGCTTCAGGCGTTCAGGGTCAGGCTCAGGGG
AATGTCAATAACCACATCCACAACCACAACAACAACAATATGAATTTTCTCAACGATGTT
TATGCCCATCCTACTACGAATTTCCGAGGCAACACCAAGGTTGAAAGTATTAATCTAGAC
GAAGAAGTTGAAAGCGGGAACAGAAATCAACGGATTGATCAATCGAGTTACTTCCAGCAG
AGTCTGAATGGATTTTCCCAAGCGTATACGAACAGTGTTGATCAATTTGGAATCCAATGT
CCGAACCAGACGTTAAATCTGGGGTTCAGGCAGTAG