Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039646
CDS Infomation

pacid=37448489 polypeptide=PGSC0003DMP400026882 locus=PGSC0003DMG400015332 ID=PGSC0003DMT400039646.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTTGCTTGAAAACAATTATTGGGCTAAAGAGGAACAAAAGAAGAAAATCAAAA
CAGCTCAAGGTTACAAGTACTAGTACATCTGATGAGCCAAATGGAGAAGTTCAAGTTCCT
AGTGCTCATTATTCAAATGGAACTTCATCTTCAAAAAAGATTACTCGTAAGACTAAATTT
ACTCACAACACTGCTGCCACTAAAATTCAGACTGCCTTCAGAGCTCATTTGGCAAGAAAA
GCTCTACGGCGCGTTAGGGGTGCAGTGAGATTTCAAGGTGTAATTGAAGGGCTAAGTGTA
AATAACCAAATAGCAGGGACTTTGAAGCAAATACATTGTTGGAGCAAAATACAATCAGAG
ATTAGAGCACGACGACTCAATATGGTGACTCAAGGCCACAATAAACAGAAGAAAATTCAA
AATCAACAAAAACTTGAGGCTAAGCTTCACGAGCTTGAGGTGGAATGGAGTAGTAGTGCT
GAAACCATAGAAGAAATACTACAGAAATTACAACAAAGAGAAGAAGCTGCAATTAAGAGG
GAGAGGGCAATGGCATATGCATTTTCTCATCAGTGGAGAGCCAATTCGAATCAATATTTT
GGACAAGCATATTATGATCTTGGCAAGGAGAGTTGGGGTTGGAGTTGGATGGAACGTTGG
ATCGCGGTTCGACCATGGGAGACTAGAGTTCAAACAAACCCTATTGTTCCAAAAATCTCT
CACTCTCAACAAGTTGCCAAGATAACTAGTAAAGCTACAAACTTGGGACCTATGAAACTA
GTTGTATCAATTAAAAATCTATCCATTTCCAATGGAAAAGAATCTACAAAAGGAAGAAAG
TTGTCCATCACTACTAATGAAAATCAAGTTTCTCAAGAGACTAATATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026882
PEP Infomation

pacid=37448489 transcript=PGSC0003DMT400039646 locus=PGSC0003DMG400015332 ID=PGSC0003DMT400039646.v4.03 annot-version=v4.03
Sequence

MGFCLKTIIGLKRNKRRKSKQLKVTSTSTSDEPNGEVQVPSAHYSNGTSSSKKITRKTKF
THNTAATKIQTAFRAHLARKALRRVRGAVRFQGVIEGLSVNNQIAGTLKQIHCWSKIQSE
IRARRLNMVTQGHNKQKKIQNQQKLEAKLHELEVEWSSSAETIEEILQKLQQREEAAIKR
ERAMAYAFSHQWRANSNQYFGQAYYDLGKESWGWSWMERWIAVRPWETRVQTNPIVPKIS
HSQQVAKITSKATNLGPMKLVVSIKNLSISNGKESTKGRKLSITTNENQVSQETNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400039646
Transcript Infomation

pacid=37448489 locus=PGSC0003DMG400015332 ID=PGSC0003DMT400039646.v4.03 annot-version=v4.03
Sequence

ATGGGTTTTTGCTTGAAAACAATTATTGGGCTAAAGAGGAACAAAAGAAGAAAATCAAAA
CAGCTCAAGGTTACAAGTACTAGTACATCTGATGAGCCAAATGGAGAAGTTCAAGTTCCT
AGTGCTCATTATTCAAATGGAACTTCATCTTCAAAAAAGATTACTCGTAAGACTAAATTT
ACTCACAACACTGCTGCCACTAAAATTCAGACTGCCTTCAGAGCTCATTTGGCAAGAAAA
GCTCTACGGCGCGTTAGGGGTGCAGTGAGATTTCAAGGTGTAATTGAAGGGCTAAGTGTA
AATAACCAAATAGCAGGGACTTTGAAGCAAATACATTGTTGGAGCAAAATACAATCAGAG
ATTAGAGCACGACGACTCAATATGGTGACTCAAGGCCACAATAAACAGAAGAAAATTCAA
AATCAACAAAAACTTGAGGCTAAGCTTCACGAGCTTGAGGTGGAATGGAGTAGTAGTGCT
GAAACCATAGAAGAAATACTACAGAAATTACAACAAAGAGAAGAAGCTGCAATTAAGAGG
GAGAGGGCAATGGCATATGCATTTTCTCATCAGTGGAGAGCCAATTCGAATCAATATTTT
GGACAAGCATATTATGATCTTGGCAAGGAGAGTTGGGGTTGGAGTTGGATGGAACGTTGG
ATCGCGGTTCGACCATGGGAGACTAGAGTTCAAACAAACCCTATTGTTCCAAAAATCTCT
CACTCTCAACAAGTTGCCAAGATAACTAGTAAAGCTACAAACTTGGGACCTATGAAACTA
GTTGTATCAATTAAAAATCTATCCATTTCCAATGGAAAAGAATCTACAAAAGGAAGAAAG
TTGTCCATCACTACTAATGAAAATCAAGTTTCTCAAGAGACTAATATTTGA