Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039644
CDS Infomation

pacid=37447262 polypeptide=PGSC0003DMP400026880 locus=PGSC0003DMG400015331 ID=PGSC0003DMT400039644.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAAGTTTTTTTTCTCACTTTCATCATCCTACTGGTATTATCCGGCGCCGTT
AACGGCCGCCGCTTCATCAGTGACTCCGGTGGACTAATTTCAGATGGTGTTCACAGTGAG
ATCGGTCGGGATTTGGAAATTCTCCGGCTGGATCGGGATTTCGCCGGCGGTGAGGAAGAG
AGTTGTGAACAGAGTTATGGATTTATGCCTTGTACTAAAACTGCTCTCGGAAATGTTTTT
CTCATTTTGGTTTATGGTTACCTTATGTTCCTTGGTGCTACGTATCTCTCTTCGGGTAGT
GAACTGTTGCTTGAGATTTTAGGGCCTGGTATTATTGGTGGACTTTTTCTTCCTGTGCTT
GGTGCTCTTCCGGATGCTATGCTTATTCTCGTATCGGGGATATCTGGAAGTACTGCAGCT
GCTCAGAGCCAGGTCTCTGTAGGAATGGGATTGCTAGCTGGGTCAACTGTGATGCTTATA
ACTATTATTTGGGGAACCTGTTGCATTGTTGGCAAGTGCGATATACAAAATTCTGTTGCT
GTAGACATGAAAGACACTAGAGGATTCAGCTTGACGGGTTCTGGTGTTAGTACTGACATC
TGGACAAGCCATGCTGCAACGATAATGGCAGCGTCTGTAACACCATTTCTTGTTGTCCAA
TTGCCACAGCTCCTCCATTCAACTTCAGGAAGACATTTATCTGTCTTGATTGGTCTTATC
ATTTCACTTTCACTGCTTGTTTCTTATTGCGTCTATCAGGTCTTTCAGCCTTGGATACAG
AGTAGACGTCTTGCTTATGTAAAACATAAGCATGTTATATCAGGAGTTTTGAAACAGTTA
AGAATGCGTGCATTGGGGAGGCTTTGCACAGACCAGGGAGCACCAAATATAGAAGTTTTA
GAAAAGCTATTCAAGGCAATTGATGAAAATGAGGATGGGTATCTTTCCCGCGCTGAATTA
AAAGCTCTGGTAGTAGGAATCCGTTTGGAGGAGATAAACTTACATGAGAATGATGCTATA
GAAAAACTGATGAAAGACTTCGATACTTCACATGATCATCGAATTGAAATGTCCGAGTTC
ATTGCTGGAGTTACAAAATGGCTTACTGAGGCCAGGGGTTCCGAGGCTTCTTCTCCTGAA
GCTGGTCCTGATACAATGAAGTACCTCGATGACTTGCATGAGCAAACAAGGAGAGAACAC
CATTTCTTAGGGGATCAAAGTGACGAAAGTGTTGAGACTGTTGAGAATCCTCGATCAACT
GTAATTAAGGCTGTTCTACTGCTGTTGCTGGGTACTGTCATTGCCGCCGTGTTTGCTGAT
CCTCTGGTTGATGCTGTCAATAATTTCTCTAGTGCCACAAGCATTCCTTCTTTCTTCATC
TCATTCATTGCTCTGCCACTGGCGACCAACTCCAGTGAGGCGGTGTCAGCTATTATCTTT
GCTAGCCGGAAAAAGTTGAGGTCTGCGTCATTAACATTTTCTGAGTTGTATGGAGCAGTG
ACTATGAACAATCTCCTTTGTCTATCCGTCTTCCTGGCTCTCGTCTATATCAGAGGATTG
ACATGGGACTTCTCGTCTGAAGTCTTGGTTATTCTAATTGTCTGTGTTGTCGTGGGGGTC
TTTGCAAGCGTTCGTAGCACCTTTCCTCTTTGGACTTCCTTGCTAGCTTTTCTACTTTAC
CCCTTCTCTCTTGTACTTGTATATGTTCTTGACTACAAATTTGGTTGGTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026880
PEP Infomation

pacid=37447262 transcript=PGSC0003DMT400039644 locus=PGSC0003DMG400015331 ID=PGSC0003DMT400039644.v4.03 annot-version=v4.03
Sequence

MSLKVFFLTFIILLVLSGAVNGRRFISDSGGLISDGVHSEIGRDLEILRLDRDFAGGEEE
SCEQSYGFMPCTKTALGNVFLILVYGYLMFLGATYLSSGSELLLEILGPGIIGGLFLPVL
GALPDAMLILVSGISGSTAAAQSQVSVGMGLLAGSTVMLITIIWGTCCIVGKCDIQNSVA
VDMKDTRGFSLTGSGVSTDIWTSHAATIMAASVTPFLVVQLPQLLHSTSGRHLSVLIGLI
ISLSLLVSYCVYQVFQPWIQSRRLAYVKHKHVISGVLKQLRMRALGRLCTDQGAPNIEVL
EKLFKAIDENEDGYLSRAELKALVVGIRLEEINLHENDAIEKLMKDFDTSHDHRIEMSEF
IAGVTKWLTEARGSEASSPEAGPDTMKYLDDLHEQTRREHHFLGDQSDESVETVENPRST
VIKAVLLLLLGTVIAAVFADPLVDAVNNFSSATSIPSFFISFIALPLATNSSEAVSAIIF
ASRKKLRSASLTFSELYGAVTMNNLLCLSVFLALVYIRGLTWDFSSEVLVILIVCVVVGV
FASVRSTFPLWTSLLAFLLYPFSLVLVYVLDYKFGWS*

Transcript Sequence

Transcript ID

PGSC0003DMT400039644
Transcript Infomation

pacid=37447262 locus=PGSC0003DMG400015331 ID=PGSC0003DMT400039644.v4.03 annot-version=v4.03
Sequence

ATGTCTCTCAAAGTTTTTTTTCTCACTTTCATCATCCTACTGGTATTATCCGGCGCCGTT
AACGGCCGCCGCTTCATCAGTGACTCCGGTGGACTAATTTCAGATGGTGTTCACAGTGAG
ATCGGTCGGGATTTGGAAATTCTCCGGCTGGATCGGGATTTCGCCGGCGGTGAGGAAGAG
AGTTGTGAACAGAGTTATGGATTTATGCCTTGTACTAAAACTGCTCTCGGAAATGTTTTT
CTCATTTTGGTTTATGGTTACCTTATGTTCCTTGGTGCTACGTATCTCTCTTCGGGTAGT
GAACTGTTGCTTGAGATTTTAGGGCCTGGTATTATTGGTGGACTTTTTCTTCCTGTGCTT
GGTGCTCTTCCGGATGCTATGCTTATTCTCGTATCGGGGATATCTGGAAGTACTGCAGCT
GCTCAGAGCCAGGTCTCTGTAGGAATGGGATTGCTAGCTGGGTCAACTGTGATGCTTATA
ACTATTATTTGGGGAACCTGTTGCATTGTTGGCAAGTGCGATATACAAAATTCTGTTGCT
GTAGACATGAAAGACACTAGAGGATTCAGCTTGACGGGTTCTGGTGTTAGTACTGACATC
TGGACAAGCCATGCTGCAACGATAATGGCAGCGTCTGTAACACCATTTCTTGTTGTCCAA
TTGCCACAGCTCCTCCATTCAACTTCAGGAAGACATTTATCTGTCTTGATTGGTCTTATC
ATTTCACTTTCACTGCTTGTTTCTTATTGCGTCTATCAGGTCTTTCAGCCTTGGATACAG
AGTAGACGTCTTGCTTATGTAAAACATAAGCATGTTATATCAGGAGTTTTGAAACAGTTA
AGAATGCGTGCATTGGGGAGGCTTTGCACAGACCAGGGAGCACCAAATATAGAAGTTTTA
GAAAAGCTATTCAAGGCAATTGATGAAAATGAGGATGGGTATCTTTCCCGCGCTGAATTA
AAAGCTCTGGTAGTAGGAATCCGTTTGGAGGAGATAAACTTACATGAGAATGATGCTATA
GAAAAACTGATGAAAGACTTCGATACTTCACATGATCATCGAATTGAAATGTCCGAGTTC
ATTGCTGGAGTTACAAAATGGCTTACTGAGGCCAGGGGTTCCGAGGCTTCTTCTCCTGAA
GCTGGTCCTGATACAATGAAGTACCTCGATGACTTGCATGAGCAAACAAGGAGAGAACAC
CATTTCTTAGGGGATCAAAGTGACGAAAGTGTTGAGACTGTTGAGAATCCTCGATCAACT
GTAATTAAGGCTGTTCTACTGCTGTTGCTGGGTACTGTCATTGCCGCCGTGTTTGCTGAT
CCTCTGGTTGATGCTGTCAATAATTTCTCTAGTGCCACAAGCATTCCTTCTTTCTTCATC
TCATTCATTGCTCTGCCACTGGCGACCAACTCCAGTGAGGCGGTGTCAGCTATTATCTTT
GCTAGCCGGAAAAAGTTGAGGTCTGCGTCATTAACATTTTCTGAGTTGTATGGAGCAGTG
ACTATGAACAATCTCCTTTGTCTATCCGTCTTCCTGGCTCTCGTCTATATCAGAGGATTG
ACATGGGACTTCTCGTCTGAAGTCTTGGTTATTCTAATTGTCTGTGTTGTCGTGGGGGTC
TTTGCAAGCGTTCGTAGCACCTTTCCTCTTTGGACTTCCTTGCTAGCTTTTCTACTTTAC
CCCTTCTCTCTTGTACTTGTATATGTTCTTGACTACAAATTTGGTTGGTCTTAG