Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039623
CDS Infomation

pacid=37448906 polypeptide=PGSC0003DMP400026867 locus=PGSC0003DMG400015326 ID=PGSC0003DMT400039623.v4.03 annot-version=v4.03
Sequence

ATGTCTACTAAAGAACTCTACCGGAGAATTCAGCGTTTCTACAGTTTTCAACCCAAAATG
GTGAGTCACTTTCATCGCCAAATGCACACAATATCCGACGAAGAAAACTGCGCGTTGAAA
GTGCAGACCCTTCTCAAGAATAAAGCAGATAAATCAGTGAGTGACATTTTTCAATCTCTA
AGTAATTGCAATTTCACATTATCTGAAGATTTCATTCTAAACGTGCTTAAACGGCACCGT
TCTGATTGGAAACCAGCTTTTACCTTCTTCAAATGGGTATTAGCAGGTGAAAATCCAAGT
GGGTATTCACCAAATACTGAATCTTTCAATGAAATTCTCGAAATTCTTGGTCGTATGAGA
CGTTTTGATGAACTCAACCAAGTGCTCGACGAAATGTCTAAGAGAGGAAATTTGGTTAAT
GAAAGAACTTATGGTATTGTGATTAATAGATATGCTGCAGCTCACAGAGTTGAAGATGCA
AAAGAGTTTTTCTATAAGAGGAAATTTTTTGGTTTGAAGCTTGATCTTATTGCTTTTCAG
ACTCTTCTTGTGTGTTTATGCCGATTCAAACATGTTGAAGATGCTGAATTCTTGTTCCAT
AATAAGATAAATGAGTTTAAGGATAACATTAAAACGCGGAATATTATTCTGAATGGATGG
TGTGTTTTGGGTAATTCACGAGAGGCGAAGAGGTTTTGGAATGATATTGTAACTTCAAAA
TGTAAGCCGGATAAATTTACATATGGGATATTCATCAATTCACTATGTAAATCAGGGAAA
ATAAGCAGGGCAGTAGAGTTGTTCCAGACAATGTGGGAAAAAGGGTGTAAGCCAGATGTT
GCAATTTGTAATTGTATTATTGATGGATTGTGTTTCAAGAAGAGAATTCCTGATGCTCTT
GAGATTTTCCATGAAATGAATGAGAGAGATTGTTTACCTGACGTTGTAACTTATAATTCG
TTGATTAAGAATTTATGCAAGATTAGGAGGATGGAGAAAGTTTATGAGCTTTTAGATGAG
ATGGAAACGAAGGGAGAGAGTTGTTTGCCAAATGCTAGAACTTATGGTTACTTGTTGAAT
TCTGCCAAGACGTCTGAGGAAGCTATTGGGATTTTGGAAAGGATGAATGAAAACCAGTGT
AAGATGACTGGAGATATTTACAATTTGTTGTTGAGGTTGTTTATGAGCTGGGATAATCAA
GATAAAGTAAAGAGTATGTGGGATGAGATGGAGAGGAGTGGACTAGGACCCGATCAACGA
TCCTATACAATTATGATTCATGGTCTTTATGAAGGGGGAAGATTAGAGGATGCTTTGTCT
TATTTTAATGAGATGATATCAAAGAGTATGGTGCCCGAGCCACAGACGAACAAGTTGGTG
GATGCTATGAACACGTTAAAGGAGAAAGGAAAGGAATCGAAGAAGATGGAAATAACGAAA
AGGGGAAGGAAGGCCAAGAATACTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026867
PEP Infomation

pacid=37448906 transcript=PGSC0003DMT400039623 locus=PGSC0003DMG400015326 ID=PGSC0003DMT400039623.v4.03 annot-version=v4.03
Sequence

MSTKELYRRIQRFYSFQPKMVSHFHRQMHTISDEENCALKVQTLLKNKADKSVSDIFQSL
SNCNFTLSEDFILNVLKRHRSDWKPAFTFFKWVLAGENPSGYSPNTESFNEILEILGRMR
RFDELNQVLDEMSKRGNLVNERTYGIVINRYAAAHRVEDAKEFFYKRKFFGLKLDLIAFQ
TLLVCLCRFKHVEDAEFLFHNKINEFKDNIKTRNIILNGWCVLGNSREAKRFWNDIVTSK
CKPDKFTYGIFINSLCKSGKISRAVELFQTMWEKGCKPDVAICNCIIDGLCFKKRIPDAL
EIFHEMNERDCLPDVVTYNSLIKNLCKIRRMEKVYELLDEMETKGESCLPNARTYGYLLN
SAKTSEEAIGILERMNENQCKMTGDIYNLLLRLFMSWDNQDKVKSMWDEMERSGLGPDQR
SYTIMIHGLYEGGRLEDALSYFNEMISKSMVPEPQTNKLVDAMNTLKEKGKESKKMEITK
RGRKAKNTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400039623
Transcript Infomation

pacid=37448906 locus=PGSC0003DMG400015326 ID=PGSC0003DMT400039623.v4.03 annot-version=v4.03
Sequence

ATGTCTACTAAAGAACTCTACCGGAGAATTCAGCGTTTCTACAGTTTTCAACCCAAAATG
GTGAGTCACTTTCATCGCCAAATGCACACAATATCCGACGAAGAAAACTGCGCGTTGAAA
GTGCAGACCCTTCTCAAGAATAAAGCAGATAAATCAGTGAGTGACATTTTTCAATCTCTA
AGTAATTGCAATTTCACATTATCTGAAGATTTCATTCTAAACGTGCTTAAACGGCACCGT
TCTGATTGGAAACCAGCTTTTACCTTCTTCAAATGGGTATTAGCAGGTGAAAATCCAAGT
GGGTATTCACCAAATACTGAATCTTTCAATGAAATTCTCGAAATTCTTGGTCGTATGAGA
CGTTTTGATGAACTCAACCAAGTGCTCGACGAAATGTCTAAGAGAGGAAATTTGGTTAAT
GAAAGAACTTATGGTATTGTGATTAATAGATATGCTGCAGCTCACAGAGTTGAAGATGCA
AAAGAGTTTTTCTATAAGAGGAAATTTTTTGGTTTGAAGCTTGATCTTATTGCTTTTCAG
ACTCTTCTTGTGTGTTTATGCCGATTCAAACATGTTGAAGATGCTGAATTCTTGTTCCAT
AATAAGATAAATGAGTTTAAGGATAACATTAAAACGCGGAATATTATTCTGAATGGATGG
TGTGTTTTGGGTAATTCACGAGAGGCGAAGAGGTTTTGGAATGATATTGTAACTTCAAAA
TGTAAGCCGGATAAATTTACATATGGGATATTCATCAATTCACTATGTAAATCAGGGAAA
ATAAGCAGGGCAGTAGAGTTGTTCCAGACAATGTGGGAAAAAGGGTGTAAGCCAGATGTT
GCAATTTGTAATTGTATTATTGATGGATTGTGTTTCAAGAAGAGAATTCCTGATGCTCTT
GAGATTTTCCATGAAATGAATGAGAGAGATTGTTTACCTGACGTTGTAACTTATAATTCG
TTGATTAAGAATTTATGCAAGATTAGGAGGATGGAGAAAGTTTATGAGCTTTTAGATGAG
ATGGAAACGAAGGGAGAGAGTTGTTTGCCAAATGCTAGAACTTATGGTTACTTGTTGAAT
TCTGCCAAGACGTCTGAGGAAGCTATTGGGATTTTGGAAAGGATGAATGAAAACCAGTGT
AAGATGACTGGAGATATTTACAATTTGTTGTTGAGGTTGTTTATGAGCTGGGATAATCAA
GATAAAGTAAAGAGTATGTGGGATGAGATGGAGAGGAGTGGACTAGGACCCGATCAACGA
TCCTATACAATTATGATTCATGGTCTTTATGAAGGGGGAAGATTAGAGGATGCTTTGTCT
TATTTTAATGAGATGATATCAAAGAGTATGGTGCCCGAGCCACAGACGAACAAGTTGGTG
GATGCTATGAACACGTTAAAGGAGAAAGGAAAGGAATCGAAGAAGATGGAAATAACGAAA
AGGGGAAGGAAGGCCAAGAATACTGGTTAA