Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039506
CDS Infomation

pacid=37462440 polypeptide=PGSC0003DMP400026785 locus=PGSC0003DMG400015274 ID=PGSC0003DMT400039506.v4.03 annot-version=v4.03
Sequence

ATGGTCCAAGGAGATGAGAAGGAGGGTATGCTTCGTAAGCTGGAGAAGAAATCCAAGAAA
AGCCATAAGAATGCTGCCACCAGTGGTCTTGGAGGAGAGAGTGATGAGTGTGACGTCAAG
AGAAAGAAAAAAAGAGAAGGTGGAAAACCCAACAAAGTCAGTGATGAAGATGTTGTGAAA
TGTGTTGAGAAAAAGAAAAAGAAAAAGAATAAGCTGAAGAAAAGCTGCTTGAATGAGCCT
TTAGACACCAAAACTAGTGCAACTGAAATGCGGGACAATGACAAGGTAGTTGAGACCCTT
GGTGAGGTCTCTGGTGGAGACGTTGTGGATGTGATTAGAAGGAAGAAGAAATCCAAGAAA
AACGTTAAGACTATCAATGGTGTAGAAGTGACAAACACTGATATTAAAGCTAAGAGTGAT
GACTCTGACATCAAGAGAAAGAAAGAAAGAAAACATGGAAAACGTTCTGGGAAGTTTCGT
GAAGACAGCGATAAGGTTGCTTCGAGAATTGTTGAAGGGAATAAAAGTAGGAAATTGAAG
AAAAGCTGTGGGGATGAGCTGGAGAAAATGCATGATACTAAGGATATACAGGAAGATGCT
GCTGCTGAAGTCAATGAAGGTGATATTTCTTCACCTATAGAGATGGAAGATAAAACCAAA
ACAGACAAAGGAAAAATCAAAAAGAGAAAAAGAATAAAATTAGGACACAGCTCTGAAGAT
CCTATACATGAGAAGAGTGAAAAGAGAGTGCGATTTTCTGGTCAGGTTCAAATTTTCCCT
TCATTGAATGATTCAAGTGATGAGAAGCATGAGATCGACGAAGAAAATTTAGTGCATGGC
AAGCGATTCTCAAAGTTAGAAGATGAAATTATCAAAGAGGCTGTTCATAAATACATAGAG
GTACATAACTTAGGCGAAGAAGGGCTGAAAAAGGTTTTAAATTCTAGATCTTATCCTGAA
ATTAAGGGTTGCTGGAAAGAAATAGGGAGTGCCCTACCATACAGACCTTCTAAGGCATTT
TATTCTCGTGCACAGGTCCTGTTTCGGAGGAGTGAATCACGTAAATGGACTGAAGAAGAG
TATGAGATGGTACGGAAGTTCCAGAAAGAGCATGGGAACAATTGGAGGGTCTTAGCTGAT
GAACTTGGAAAACATCGGTGGCATGTGAAGGATACATGGCGAAGGCTAAAACTGCCCAAT
CAGAATAAAGGACAATGGACTCAAGAGGAGTACCAGAATTTGTTTGATTTAGTAAACACC
GATCTGAGACTGAAGCTTTCTGAAGAGAAGAAATCTAAGCATGGGATGCTACGGGATAAT
ATTGCATGGGGTGCAATTAGTGAAAACTTGTCCACGAGAACTGATGCAAACTGCTGCTTA
AAATGGTATGATCAATTGACATCGCCCATGGTGGCCAAAGGTGAATGGGCGGATGCTGAT
GACTATCGCCTAGTTGATGCACTTTTTGAGCTGGATGCAAGCTGCATAGAAGATGTGGAC
TGGGACAATCTTCTTGACCATAGGCCTGGAGAGATATGTCGAAAGAGATGGAACCAAATG
ATTCTTCACATAGGTCAACTTGGAAACAAGTCATTTGCTGATCAAGTAGAAGTTCTAGCT
AAGAGATACCGTCCGGATTTAGTCGAAGTAAGAGAGGCTTGGGACAGTAAACCAATCGTA
CCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400026785
PEP Infomation

pacid=37462440 transcript=PGSC0003DMT400039506 locus=PGSC0003DMG400015274 ID=PGSC0003DMT400039506.v4.03 annot-version=v4.03
Sequence

MVQGDEKEGMLRKLEKKSKKSHKNAATSGLGGESDECDVKRKKKREGGKPNKVSDEDVVK
CVEKKKKKKNKLKKSCLNEPLDTKTSATEMRDNDKVVETLGEVSGGDVVDVIRRKKKSKK
NVKTINGVEVTNTDIKAKSDDSDIKRKKERKHGKRSGKFREDSDKVASRIVEGNKSRKLK
KSCGDELEKMHDTKDIQEDAAAEVNEGDISSPIEMEDKTKTDKGKIKKRKRIKLGHSSED
PIHEKSEKRVRFSGQVQIFPSLNDSSDEKHEIDEENLVHGKRFSKLEDEIIKEAVHKYIE
VHNLGEEGLKKVLNSRSYPEIKGCWKEIGSALPYRPSKAFYSRAQVLFRRSESRKWTEEE
YEMVRKFQKEHGNNWRVLADELGKHRWHVKDTWRRLKLPNQNKGQWTQEEYQNLFDLVNT
DLRLKLSEEKKSKHGMLRDNIAWGAISENLSTRTDANCCLKWYDQLTSPMVAKGEWADAD
DYRLVDALFELDASCIEDVDWDNLLDHRPGEICRKRWNQMILHIGQLGNKSFADQVEVLA
KRYRPDLVEVREAWDSKPIVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400039506
Transcript Infomation

pacid=37462440 locus=PGSC0003DMG400015274 ID=PGSC0003DMT400039506.v4.03 annot-version=v4.03
Sequence

ATGGTCCAAGGAGATGAGAAGGAGGGTATGCTTCGTAAGCTGGAGAAGAAATCCAAGAAA
AGCCATAAGAATGCTGCCACCAGTGGTCTTGGAGGAGAGAGTGATGAGTGTGACGTCAAG
AGAAAGAAAAAAAGAGAAGGTGGAAAACCCAACAAAGTCAGTGATGAAGATGTTGTGAAA
TGTGTTGAGAAAAAGAAAAAGAAAAAGAATAAGCTGAAGAAAAGCTGCTTGAATGAGCCT
TTAGACACCAAAACTAGTGCAACTGAAATGCGGGACAATGACAAGGTAGTTGAGACCCTT
GGTGAGGTCTCTGGTGGAGACGTTGTGGATGTGATTAGAAGGAAGAAGAAATCCAAGAAA
AACGTTAAGACTATCAATGGTGTAGAAGTGACAAACACTGATATTAAAGCTAAGAGTGAT
GACTCTGACATCAAGAGAAAGAAAGAAAGAAAACATGGAAAACGTTCTGGGAAGTTTCGT
GAAGACAGCGATAAGGTTGCTTCGAGAATTGTTGAAGGGAATAAAAGTAGGAAATTGAAG
AAAAGCTGTGGGGATGAGCTGGAGAAAATGCATGATACTAAGGATATACAGGAAGATGCT
GCTGCTGAAGTCAATGAAGGTGATATTTCTTCACCTATAGAGATGGAAGATAAAACCAAA
ACAGACAAAGGAAAAATCAAAAAGAGAAAAAGAATAAAATTAGGACACAGCTCTGAAGAT
CCTATACATGAGAAGAGTGAAAAGAGAGTGCGATTTTCTGGTCAGGTTCAAATTTTCCCT
TCATTGAATGATTCAAGTGATGAGAAGCATGAGATCGACGAAGAAAATTTAGTGCATGGC
AAGCGATTCTCAAAGTTAGAAGATGAAATTATCAAAGAGGCTGTTCATAAATACATAGAG
GTACATAACTTAGGCGAAGAAGGGCTGAAAAAGGTTTTAAATTCTAGATCTTATCCTGAA
ATTAAGGGTTGCTGGAAAGAAATAGGGAGTGCCCTACCATACAGACCTTCTAAGGCATTT
TATTCTCGTGCACAGGTCCTGTTTCGGAGGAGTGAATCACGTAAATGGACTGAAGAAGAG
TATGAGATGGTACGGAAGTTCCAGAAAGAGCATGGGAACAATTGGAGGGTCTTAGCTGAT
GAACTTGGAAAACATCGGTGGCATGTGAAGGATACATGGCGAAGGCTAAAACTGCCCAAT
CAGAATAAAGGACAATGGACTCAAGAGGAGTACCAGAATTTGTTTGATTTAGTAAACACC
GATCTGAGACTGAAGCTTTCTGAAGAGAAGAAATCTAAGCATGGGATGCTACGGGATAAT
ATTGCATGGGGTGCAATTAGTGAAAACTTGTCCACGAGAACTGATGCAAACTGCTGCTTA
AAATGGTATGATCAATTGACATCGCCCATGGTGGCCAAAGGTGAATGGGCGGATGCTGAT
GACTATCGCCTAGTTGATGCACTTTTTGAGCTGGATGCAAGCTGCATAGAAGATGTGGAC
TGGGACAATCTTCTTGACCATAGGCCTGGAGAGATATGTCGAAAGAGATGGAACCAAATG
ATTCTTCACATAGGTCAACTTGGAAACAAGTCATTTGCTGATCAAGTAGAAGTTCTAGCT
AAGAGATACCGTCCGGATTTAGTCGAAGTAAGAGAGGCTTGGGACAGTAAACCAATCGTA
CCATGA