Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039496
CDS Infomation

pacid=37460436 polypeptide=PGSC0003DMP400026780 locus=PGSC0003DMG400015270 ID=PGSC0003DMT400039496.v4.03 annot-version=v4.03
Sequence

ATGAGGAATTTGTCGACTTCAGCGAATGATGTGATGATGGAAATTGAAGCGAATAAACCA
CAAGGTCATGGTATCGTTGTAGGTGGATTGAGTCCGTTGAGTGAAACATTATGGAAGGAG
AAAACAAATACTGAGTTTATTGGTGATGTTTCTGCTAGATTGGCTTGGAAAGATCTAACT
GTTATGGTTACTCTTAATAGTGGTGAAACACAGAATGTTCTAGAAGGACTTACTGGTTAT
GCTGAACCTGGAACTTTTACTGCTTTAATGGGTCCTTCTGGTTCTGGAAAGTCTACTCTT
CTCGATGCGCTCTCTGGTCGACTTGCTTCTAATGCTTTTCTTTCAGGCAGAGTTTTGCTT
AATGGACGTAAAGCTAATCTCTCTTTTGGAACTGCGGCGTATGTGACGCAAGATGATACG
TTGATTGGGACATTGACAGTTAGGGAGACGATATCGTATTCTGCTAGACTACGTCTCCCT
GATCGGATGCCATGGTCGGAGAAACGGACATTGATTGAGAGTACTATTATTGAAATGGGA
CTTCAGGATTGTGCTGATACAGTTATTGGAAACTGGCATTTACGCGGTATAAGCGGAGGA
GAAAAGAGGAGAGTTAGTATCGCGCTTGAGATTCTTATGAGGCCTAGATTGCTTTTTCTT
GATGAGCCGACTAGTGGTCTTGACAGTGCTTCGGCGTTCTTTGTTACACAGACACTGCGT
GGTCTGTCGAGAGATGGAAGGACTGTAATAGCTTCAATTCATCAGCCGAGTAGTGAAGTA
TTTGAGTTGTTTGACAGATTGTATTTGCTTTCTGGAGGCAAAACAGTTTACTTTGGTCAA
GCTTCTGAAGCATATGAGTTCTTTGCACAAGCTGGATTTCCTTGTCCTGCTCTAAGAAAT
CCATCAGATCATTTCCTACGATGCATCAATTCTGATTTCGACAAAGTTAAAGCAACTCTA
AAGGGGTCAATGAAGCTACGGTTTGAGTCCAATGAGGATCCTCTTGACAAAACAACGACA
GCTGAAGCCATACGCATCCTAGTAGACTATTATCGTCGTTCTCAGTACAGTTACTCAGCT
AACGAAAGGGTTGAAGAAATGTCGAAAGTTAAAGGAACAGTGCTAGATTCTGGCGGAAGT
CAGGCTAGTTTCTTCATGCAGGCCTACACCTTAACGAAACGTTCCTTTGTTAACATGTCA
AGAGACTTTGGTTATTACTGGTTGAGGCTTGTTATCTACTTGGTGGTCACTATCTGCATT
GGAACTATCTATCTTAACGTGGGAACCGGTTATAGTTCCATCCTGGCAAGAGGAGCATGT
GCATCATTCGTCTTTGGATTTGTGACATTCATGTCAATTGGAGGATTTCCTTCTTTCGTT
GAAGATATGAAGGTTTTTCAAAGGGAGAGGATGAATGGACACTATGGTGTTTTTGCATTT
GTTGTGAGCAATACCTTATCCGCGATGCCATTTCTGATACTGATCACCTTTCTTTCTGGC
ACTGTCTGCTATTTCATGGTCCAGTTACACCCGGGCTTCACACACTATTTATTCTTTGTG
ATATGCCTCTATGCCAGTGTCACTGTTGTCGAAAGCTTGATGATGGTCATAGCTAGTATT
GTCCCTAATTTCCTCATGGGTATCATTATTGGTGCTGGAATTCAGGGAATATTTATGCTA
GTCTCTGGATACTTTAGACTCCCCAACGACATCCCAAAGCCTTTCTGGCGTTACCCCATG
TCTTACCTCAGTTTCCATTTCTGGGCACTACAGGGGCAATATCAAAACGATTTGATGGGA
TTGGAGTTTGATAACTCGAGTCCTGATCTTCCCAAAATCTCTGGTGAATTCATACTAGAG
CAGATATTCCAAATCGATCTGAACAGATCAAAATGGGTAGACGTGAGTGTGATCTTCGTG
ATGATAATCACCTATCGCATTATCTTCTTTATCATGATCAAGATCAACGAGGATGTCACA
CCGTGGATCAGAGGGTACATTGCTAGAAGAAAAATGCAGCAGAAGAATGGAAATCAAAAA
CAGACAATTGCTCCATATGGTCTTACTCAATCACCCTCTCTCAGGGCCTATGCTGGAAAC
AATGGACCAAATAGCAATAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026780
PEP Infomation

pacid=37460436 transcript=PGSC0003DMT400039496 locus=PGSC0003DMG400015270 ID=PGSC0003DMT400039496.v4.03 annot-version=v4.03
Sequence

MRNLSTSANDVMMEIEANKPQGHGIVVGGLSPLSETLWKEKTNTEFIGDVSARLAWKDLT
VMVTLNSGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSGRLASNAFLSGRVLL
NGRKANLSFGTAAYVTQDDTLIGTLTVRETISYSARLRLPDRMPWSEKRTLIESTIIEMG
LQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLR
GLSRDGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRN
PSDHFLRCINSDFDKVKATLKGSMKLRFESNEDPLDKTTTAEAIRILVDYYRRSQYSYSA
NERVEEMSKVKGTVLDSGGSQASFFMQAYTLTKRSFVNMSRDFGYYWLRLVIYLVVTICI
GTIYLNVGTGYSSILARGACASFVFGFVTFMSIGGFPSFVEDMKVFQRERMNGHYGVFAF
VVSNTLSAMPFLILITFLSGTVCYFMVQLHPGFTHYLFFVICLYASVTVVESLMMVIASI
VPNFLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPFWRYPMSYLSFHFWALQGQYQNDLMG
LEFDNSSPDLPKISGEFILEQIFQIDLNRSKWVDVSVIFVMIITYRIIFFIMIKINEDVT
PWIRGYIARRKMQQKNGNQKQTIAPYGLTQSPSLRAYAGNNGPNSNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400039496
Transcript Infomation

pacid=37460436 locus=PGSC0003DMG400015270 ID=PGSC0003DMT400039496.v4.03 annot-version=v4.03
Sequence

ATGAGGAATTTGTCGACTTCAGCGAATGATGTGATGATGGAAATTGAAGCGAATAAACCA
CAAGGTCATGGTATCGTTGTAGGTGGATTGAGTCCGTTGAGTGAAACATTATGGAAGGAG
AAAACAAATACTGAGTTTATTGGTGATGTTTCTGCTAGATTGGCTTGGAAAGATCTAACT
GTTATGGTTACTCTTAATAGTGGTGAAACACAGAATGTTCTAGAAGGACTTACTGGTTAT
GCTGAACCTGGAACTTTTACTGCTTTAATGGGTCCTTCTGGTTCTGGAAAGTCTACTCTT
CTCGATGCGCTCTCTGGTCGACTTGCTTCTAATGCTTTTCTTTCAGGCAGAGTTTTGCTT
AATGGACGTAAAGCTAATCTCTCTTTTGGAACTGCGGCGTATGTGACGCAAGATGATACG
TTGATTGGGACATTGACAGTTAGGGAGACGATATCGTATTCTGCTAGACTACGTCTCCCT
GATCGGATGCCATGGTCGGAGAAACGGACATTGATTGAGAGTACTATTATTGAAATGGGA
CTTCAGGATTGTGCTGATACAGTTATTGGAAACTGGCATTTACGCGGTATAAGCGGAGGA
GAAAAGAGGAGAGTTAGTATCGCGCTTGAGATTCTTATGAGGCCTAGATTGCTTTTTCTT
GATGAGCCGACTAGTGGTCTTGACAGTGCTTCGGCGTTCTTTGTTACACAGACACTGCGT
GGTCTGTCGAGAGATGGAAGGACTGTAATAGCTTCAATTCATCAGCCGAGTAGTGAAGTA
TTTGAGTTGTTTGACAGATTGTATTTGCTTTCTGGAGGCAAAACAGTTTACTTTGGTCAA
GCTTCTGAAGCATATGAGTTCTTTGCACAAGCTGGATTTCCTTGTCCTGCTCTAAGAAAT
CCATCAGATCATTTCCTACGATGCATCAATTCTGATTTCGACAAAGTTAAAGCAACTCTA
AAGGGGTCAATGAAGCTACGGTTTGAGTCCAATGAGGATCCTCTTGACAAAACAACGACA
GCTGAAGCCATACGCATCCTAGTAGACTATTATCGTCGTTCTCAGTACAGTTACTCAGCT
AACGAAAGGGTTGAAGAAATGTCGAAAGTTAAAGGAACAGTGCTAGATTCTGGCGGAAGT
CAGGCTAGTTTCTTCATGCAGGCCTACACCTTAACGAAACGTTCCTTTGTTAACATGTCA
AGAGACTTTGGTTATTACTGGTTGAGGCTTGTTATCTACTTGGTGGTCACTATCTGCATT
GGAACTATCTATCTTAACGTGGGAACCGGTTATAGTTCCATCCTGGCAAGAGGAGCATGT
GCATCATTCGTCTTTGGATTTGTGACATTCATGTCAATTGGAGGATTTCCTTCTTTCGTT
GAAGATATGAAGGTTTTTCAAAGGGAGAGGATGAATGGACACTATGGTGTTTTTGCATTT
GTTGTGAGCAATACCTTATCCGCGATGCCATTTCTGATACTGATCACCTTTCTTTCTGGC
ACTGTCTGCTATTTCATGGTCCAGTTACACCCGGGCTTCACACACTATTTATTCTTTGTG
ATATGCCTCTATGCCAGTGTCACTGTTGTCGAAAGCTTGATGATGGTCATAGCTAGTATT
GTCCCTAATTTCCTCATGGGTATCATTATTGGTGCTGGAATTCAGGGAATATTTATGCTA
GTCTCTGGATACTTTAGACTCCCCAACGACATCCCAAAGCCTTTCTGGCGTTACCCCATG
TCTTACCTCAGTTTCCATTTCTGGGCACTACAGGGGCAATATCAAAACGATTTGATGGGA
TTGGAGTTTGATAACTCGAGTCCTGATCTTCCCAAAATCTCTGGTGAATTCATACTAGAG
CAGATATTCCAAATCGATCTGAACAGATCAAAATGGGTAGACGTGAGTGTGATCTTCGTG
ATGATAATCACCTATCGCATTATCTTCTTTATCATGATCAAGATCAACGAGGATGTCACA
CCGTGGATCAGAGGGTACATTGCTAGAAGAAAAATGCAGCAGAAGAATGGAAATCAAAAA
CAGACAATTGCTCCATATGGTCTTACTCAATCACCCTCTCTCAGGGCCTATGCTGGAAAC
AATGGACCAAATAGCAATAGGTAA