Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039489
CDS Infomation

pacid=37463318 polypeptide=PGSC0003DMP400026773 locus=PGSC0003DMG400015265 ID=PGSC0003DMT400039489.v4.03 annot-version=v4.03
Sequence

ATGGGTCATTTGAGAAGAAAGGCTCCACCTTTTTCCTCTGTTTTCTTGATTTTTCTAACT
CTTTTATGGGGTTTTCAGAATACTTATGGAGACCAAAAACAACCCATTAAAACTGTTGTT
GTGTTGGTTTTGGAGAATAGATCTTTTGATCATTTGCTTGGATGGATGAAGAAATCAGTG
AATCCAAGAATTAATGGTGTTACTGGAAAAGAGTGTAATCCATTGTCTACTAAAGCTCAA
GATACTGAAACAATTTGCTTTACTGATGATGCACAGTATGTGGATCCAGACCCTGGTCAC
TCTTTTGAAGATGTGGAACAACAGGTATTTGGCTCTGGCTCTGGCTCTATTCCATCAATG
TCAGGTTTTGTAGAACAAGCACTCACTATGTCTGATAAGAATCTATCAAGAGCTGTCATG
AGAGGATTTAAGCCGGAAAATGTCCCAATTTACGCCACATTAGTTCGCGAATTCGCGGTA
TTCGACAGATGGTTTTGTTCAATTCCAGGTCCAACACAACCAAACAGGCTATTTCTATAC
TCTGCAACTTCTCATGGTTCCACTAGTCATGTAAAGAAGCAGCTAGCTACAGGGTATCCA
CAAAAAACCATATTCGATTCGTTACACGAAAACGGATTGGATTTCGGTATTTACTACCAA
AACATACCATCAACTCTGTTTTACAGAAATCTAAGGATGTTGAAGTACATGTTTAAGTTT
CATCAGTATGATTTGAAGTTCAAGAAAGATGCTAAAAATGGAAACTTGCCTAATTTGACA
GTGATTGAGCCAAGGTATTTCGGTATAATCGGATATCCAGCAAATGATGATCATCCATCA
CATGATGTTGCTGATGGACAGAAATTAGTTAAGGAGATTTATGAGACACTGAGAGCTAGT
CCTCAGTGGAATGAGACACTTTTTGTTATTACTTATGATGAACATGGTGGATTTTATGAT
CATGTTAAAACTCCTTTTGGTGATGTTCCAAATCCAGATGGAAATACTGGACCTGCACCT
TCTTTCTTTAAGTTCGATAGGCTTGGTGTTCGTGTTCCAACGATTATGGTGTCTCCTTGG
ATCAAGAAAGGAACTGTAATAACCAAGCCCAAGGGACCTACACCAAATTCAGAATTCGAA
CACTCATCAATTCCAGCAACAATAAAGAAAATATTCAATCTTACATCGAATTTTTTAACT
CATAGAGATGCTTGGGCTGGCACATTTGAACATGTTGTAGCTCAATTGTCATCTCCAAGA
ACTGATTGCCCTGGTAAGTACTCATACATCACTAGTTCTACTTTTATAGACGATTATCTT
TCTCAATTTTCGATTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026773
PEP Infomation

pacid=37463318 transcript=PGSC0003DMT400039489 locus=PGSC0003DMG400015265 ID=PGSC0003DMT400039489.v4.03 annot-version=v4.03
Sequence

MGHLRRKAPPFSSVFLIFLTLLWGFQNTYGDQKQPIKTVVVLVLENRSFDHLLGWMKKSV
NPRINGVTGKECNPLSTKAQDTETICFTDDAQYVDPDPGHSFEDVEQQVFGSGSGSIPSM
SGFVEQALTMSDKNLSRAVMRGFKPENVPIYATLVREFAVFDRWFCSIPGPTQPNRLFLY
SATSHGSTSHVKKQLATGYPQKTIFDSLHENGLDFGIYYQNIPSTLFYRNLRMLKYMFKF
HQYDLKFKKDAKNGNLPNLTVIEPRYFGIIGYPANDDHPSHDVADGQKLVKEIYETLRAS
PQWNETLFVITYDEHGGFYDHVKTPFGDVPNPDGNTGPAPSFFKFDRLGVRVPTIMVSPW
IKKGTVITKPKGPTPNSEFEHSSIPATIKKIFNLTSNFLTHRDAWAGTFEHVVAQLSSPR
TDCPGKYSYITSSTFIDDYLSQFSID*

Transcript Sequence

Transcript ID

PGSC0003DMT400039489
Transcript Infomation

pacid=37463318 locus=PGSC0003DMG400015265 ID=PGSC0003DMT400039489.v4.03 annot-version=v4.03
Sequence

ATGGGTCATTTGAGAAGAAAGGCTCCACCTTTTTCCTCTGTTTTCTTGATTTTTCTAACT
CTTTTATGGGGTTTTCAGAATACTTATGGAGACCAAAAACAACCCATTAAAACTGTTGTT
GTGTTGGTTTTGGAGAATAGATCTTTTGATCATTTGCTTGGATGGATGAAGAAATCAGTG
AATCCAAGAATTAATGGTGTTACTGGAAAAGAGTGTAATCCATTGTCTACTAAAGCTCAA
GATACTGAAACAATTTGCTTTACTGATGATGCACAGTATGTGGATCCAGACCCTGGTCAC
TCTTTTGAAGATGTGGAACAACAGGTATTTGGCTCTGGCTCTGGCTCTATTCCATCAATG
TCAGGTTTTGTAGAACAAGCACTCACTATGTCTGATAAGAATCTATCAAGAGCTGTCATG
AGAGGATTTAAGCCGGAAAATGTCCCAATTTACGCCACATTAGTTCGCGAATTCGCGGTA
TTCGACAGATGGTTTTGTTCAATTCCAGGTCCAACACAACCAAACAGGCTATTTCTATAC
TCTGCAACTTCTCATGGTTCCACTAGTCATGTAAAGAAGCAGCTAGCTACAGGGTATCCA
CAAAAAACCATATTCGATTCGTTACACGAAAACGGATTGGATTTCGGTATTTACTACCAA
AACATACCATCAACTCTGTTTTACAGAAATCTAAGGATGTTGAAGTACATGTTTAAGTTT
CATCAGTATGATTTGAAGTTCAAGAAAGATGCTAAAAATGGAAACTTGCCTAATTTGACA
GTGATTGAGCCAAGGTATTTCGGTATAATCGGATATCCAGCAAATGATGATCATCCATCA
CATGATGTTGCTGATGGACAGAAATTAGTTAAGGAGATTTATGAGACACTGAGAGCTAGT
CCTCAGTGGAATGAGACACTTTTTGTTATTACTTATGATGAACATGGTGGATTTTATGAT
CATGTTAAAACTCCTTTTGGTGATGTTCCAAATCCAGATGGAAATACTGGACCTGCACCT
TCTTTCTTTAAGTTCGATAGGCTTGGTGTTCGTGTTCCAACGATTATGGTGTCTCCTTGG
ATCAAGAAAGGAACTGTAATAACCAAGCCCAAGGGACCTACACCAAATTCAGAATTCGAA
CACTCATCAATTCCAGCAACAATAAAGAAAATATTCAATCTTACATCGAATTTTTTAACT
CATAGAGATGCTTGGGCTGGCACATTTGAACATGTTGTAGCTCAATTGTCATCTCCAAGA
ACTGATTGCCCTGGTAAGTACTCATACATCACTAGTTCTACTTTTATAGACGATTATCTT
TCTCAATTTTCGATTGATTGA