Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039470
CDS Infomation

pacid=37459979 polypeptide=PGSC0003DMP400026764 locus=PGSC0003DMG402015259 ID=PGSC0003DMT400039470.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAGCCCTCAGCAATCGGCGGCGAATGCAGCGGCGGCAGCTGCAGCAGCTCAG
TCCGCTGGGTATCCGACTCAGCCACCTTACCACCATCTCCTTCAGCAACAGCAGCAGCAG
TTACAGATGTTTTGGACCTACCAACGCCAGGAAATCGAACAGGTTAACGATTTTAAGAAC
CATCAACTTCCCCTTGCCCGAATCAAGAAGATCATGAAAGCTGACGAAGATGTCCGTATG
ATCTCCGCTGAAGCACCCATTTTGTTTGCCAAGGCATGTGAGCTTTTCATTCTGGAACTC
ACTATTCGTTCCTGGCTTCACGCTGAGGAAAACAAGCGACGGACTCTGCAGAAGAATGAC
ATCGCTGCGGCGATTACGCGGACTGACATTTTCGATTTCCTTGTTGACATTGTTCCGAGG
GATGAGATCAAGGAAGAGGATGCTGGTCTTGGGCCTGGCATGGTGGGTTCCACAGCAAGT
GGTGTTCCGTACTATTATCCACCAATGGGACAGCCTGCTCCACCTGGGGTGATGATGGGA
AGGCCTGCTATGCCTGGGGTTGATCCTTCAATGTACGTCCAGCCTCCGCCACCACCATCG
CAGGCGTGGCAGTCCGTTTGGCAGGCTGCTGAGGATAATTCTTATGCTGGTGGAGGCAGC
AATGGACAGGGTAACCTTGATGGTCAAAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026764
PEP Infomation

pacid=37459979 transcript=PGSC0003DMT400039470 locus=PGSC0003DMG402015259 ID=PGSC0003DMT400039470.v4.03 annot-version=v4.03
Sequence

MENSPQQSAANAAAAAAAAQSAGYPTQPPYHHLLQQQQQQLQMFWTYQRQEIEQVNDFKN
HQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKND
IAAAITRTDIFDFLVDIVPRDEIKEEDAGLGPGMVGSTASGVPYYYPPMGQPAPPGVMMG
RPAMPGVDPSMYVQPPPPPSQAWQSVWQAAEDNSYAGGGSNGQGNLDGQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400039470
Transcript Infomation

pacid=37459979 locus=PGSC0003DMG402015259 ID=PGSC0003DMT400039470.v4.03 annot-version=v4.03
Sequence

ATGGAAAACAGCCCTCAGCAATCGGCGGCGAATGCAGCGGCGGCAGCTGCAGCAGCTCAG
TCCGCTGGGTATCCGACTCAGCCACCTTACCACCATCTCCTTCAGCAACAGCAGCAGCAG
TTACAGATGTTTTGGACCTACCAACGCCAGGAAATCGAACAGGTTAACGATTTTAAGAAC
CATCAACTTCCCCTTGCCCGAATCAAGAAGATCATGAAAGCTGACGAAGATGTCCGTATG
ATCTCCGCTGAAGCACCCATTTTGTTTGCCAAGGCATGTGAGCTTTTCATTCTGGAACTC
ACTATTCGTTCCTGGCTTCACGCTGAGGAAAACAAGCGACGGACTCTGCAGAAGAATGAC
ATCGCTGCGGCGATTACGCGGACTGACATTTTCGATTTCCTTGTTGACATTGTTCCGAGG
GATGAGATCAAGGAAGAGGATGCTGGTCTTGGGCCTGGCATGGTGGGTTCCACAGCAAGT
GGTGTTCCGTACTATTATCCACCAATGGGACAGCCTGCTCCACCTGGGGTGATGATGGGA
AGGCCTGCTATGCCTGGGGTTGATCCTTCAATGTACGTCCAGCCTCCGCCACCACCATCG
CAGGCGTGGCAGTCCGTTTGGCAGGCTGCTGAGGATAATTCTTATGCTGGTGGAGGCAGC
AATGGACAGGGTAACCTTGATGGTCAAAGTTAA