Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039443
CDS Infomation

pacid=37463928 polypeptide=PGSC0003DMP400026749 locus=PGSC0003DMG400015251 ID=PGSC0003DMT400039443.v4.03 annot-version=v4.03
Sequence

ATGCAAACTCTTCAAACTTGTTCTTTGTTCTTCACATTTCCATCTCCTAAAACCCTCCTT
AAACCCCTAAATTCTTCTAAATTCACTGCTTTTCCTTTCTTCAATCTCTCTACTTCATCC
AATTTCAAGCATTCCCCTCTTACTCTTCACTGTTTCAGTTCAGATGAATACCCAGTAGGT
GATGACGACGCATTTCTCGAAGCTTTTGGACCCAAAGAGAAAGAATCTGAAGAAGAAGCC
CGGCGCCGGAACTGGGTCGACCGTGGTTGGGCTCCATGGGAAGAAATCCTCTCACCTGAA
GGTGATTTTGCTCGGAAATCTCTTAATGAAGGTGAAGAAGTTGCGCTTCAGTCACCTGAA
GCTATTGAAGCTTTCAGAATGCTTAGTCCCAACTACCGGAAAAAGAAGATTAAGGAAATG
GGTATAACGGAAGATGAGTATTACGCTAAGCAATTTGAGATTAAAGGTGATATTCCTGAG
CCTTTGGAGACTATGTGGTCTGGGCCGTTGGTGGTTCGACATGTACCACCTAGGGATTGG
CCGCCGAGGGGGTGGGAGGTTGATAAGAAGGAATTGGAGTTCATTAGAGAAGCTCATAAG
ATGCAGGCTGTGAGAGTGGACTATGATAAAGTGGAGGAGATGGTGAATAAGGAGACTGAT
GATATGAGTTTGGAACGGTATAAAGTGTTCTTGAAGCAGTATAATGAGTGGGTTGCTGCT
AACAAGGATAGATTAGAAGAAGAATCTTACAAGTATGACCAAGACTATTATCCTGGCAGG
AGAAAAAGGGGAAAGGATTACCAAGATGGAATGTATGAACTCCCATTTTACTACCCAGGA
CAGATTTGTGCTGGTAAAGTGACAGCTATACACCTTTATCAAGGAGCATTTGTTGATATT
GGAGGTGTTCATGATGGGTGGGTGCCAATAAAGCGAAATGACTGGTATTGGATCCGCCAT
CACATAAAAGTTGGTATGCATGTCATAGTTGAAATTCTGGCTAAACGTGATCCTTACAGG
TTTCGGTTCCCTATTGAGATGCGCTTTGTTGATCCTAACATAGATCACCTAATCTTTAAT
AGATTTGATTTTCCGCCTATATTTCATCGTGAAGAGGATACAAATCTAGATGAATTGCGT
CGTGATTGTGGAAGACAACCTATTCCTAGAAAAGACCCTGGAGTCAAAGTTGAAGAAGAA
CCACTACTATCAAATCACCCTTATGTGGACAAGTTATGGCAGATCCATAATGCTGAACAA
ATGATTCTGGATGACATGGAAGCAAATCCTGATAAATATGAAGGCAAAAACTTGACAGAG
TTAGCTGACGAGGAAGATTTTGATGAAGAAAATAGCACTGAGTACTCCAAAGCTTATTAT
AAGAAAGCGTTGCTTACCAAGATGATTACAAAAGTCAGCGTAAGAGAGCTTGACTTGGAA
GCTGCACTTGCTGAGCGTCAGCACCATAATAAACTGAGAATAGAAGCACAAGAACGAGGA
GAGGTGTACAAAATTTCCAAGCTGAGACGAAACATTGAGATGGATGAATACGATTTTATC
CATTGGCGTCGGTCCCTTGAGGAAAGAGAGGCTCTATTAAGAGATATAAGCTGTCGCCGA
GCTCTTGGGCTCCCACTGGAAGAGCCTGGTAGGTATGTGGATCCAAGTGCTATCAGCAAG
GATCAGTATGATCCTGAAAGTCCCTTGTATAGATATGACTACTGGGGCGAGCCAAAGAAC
TCAGAGAAGAGCAAGCAGGAGCGAATGACGGATGCTCACAATAAATCTATTGTTGGCAAA
GGTACTGTTTGGTATGAGTTGTCATATGAAGATGCCATCAAGGAGCAGATGCAGATGGAG
GCCCAAGGATTTGTGCGGGAGTTGTATGATAAAGATTCTGACAGCGACCAAGTGAATACA
GATGATGAAGATGACGAGGAAGACTTCGATTACAGCATCCTAGGCGACCCAAGTGAAAAT
ACAACCAACCAACCTTATGTCAATGGAACTGAATCTTCTCAGCTATCAGATGAAGGAATG
TTTGAAGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026749
PEP Infomation

pacid=37463928 transcript=PGSC0003DMT400039443 locus=PGSC0003DMG400015251 ID=PGSC0003DMT400039443.v4.03 annot-version=v4.03
Sequence

MQTLQTCSLFFTFPSPKTLLKPLNSSKFTAFPFFNLSTSSNFKHSPLTLHCFSSDEYPVG
DDDAFLEAFGPKEKESEEEARRRNWVDRGWAPWEEILSPEGDFARKSLNEGEEVALQSPE
AIEAFRMLSPNYRKKKIKEMGITEDEYYAKQFEIKGDIPEPLETMWSGPLVVRHVPPRDW
PPRGWEVDKKELEFIREAHKMQAVRVDYDKVEEMVNKETDDMSLERYKVFLKQYNEWVAA
NKDRLEEESYKYDQDYYPGRRKRGKDYQDGMYELPFYYPGQICAGKVTAIHLYQGAFVDI
GGVHDGWVPIKRNDWYWIRHHIKVGMHVIVEILAKRDPYRFRFPIEMRFVDPNIDHLIFN
RFDFPPIFHREEDTNLDELRRDCGRQPIPRKDPGVKVEEEPLLSNHPYVDKLWQIHNAEQ
MILDDMEANPDKYEGKNLTELADEEDFDEENSTEYSKAYYKKALLTKMITKVSVRELDLE
AALAERQHHNKLRIEAQERGEVYKISKLRRNIEMDEYDFIHWRRSLEEREALLRDISCRR
ALGLPLEEPGRYVDPSAISKDQYDPESPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGK
GTVWYELSYEDAIKEQMQMEAQGFVRELYDKDSDSDQVNTDDEDDEEDFDYSILGDPSEN
TTNQPYVNGTESSQLSDEGMFED*

Transcript Sequence

Transcript ID

PGSC0003DMT400039443
Transcript Infomation

pacid=37463928 locus=PGSC0003DMG400015251 ID=PGSC0003DMT400039443.v4.03 annot-version=v4.03
Sequence

ATGCAAACTCTTCAAACTTGTTCTTTGTTCTTCACATTTCCATCTCCTAAAACCCTCCTT
AAACCCCTAAATTCTTCTAAATTCACTGCTTTTCCTTTCTTCAATCTCTCTACTTCATCC
AATTTCAAGCATTCCCCTCTTACTCTTCACTGTTTCAGTTCAGATGAATACCCAGTAGGT
GATGACGACGCATTTCTCGAAGCTTTTGGACCCAAAGAGAAAGAATCTGAAGAAGAAGCC
CGGCGCCGGAACTGGGTCGACCGTGGTTGGGCTCCATGGGAAGAAATCCTCTCACCTGAA
GGTGATTTTGCTCGGAAATCTCTTAATGAAGGTGAAGAAGTTGCGCTTCAGTCACCTGAA
GCTATTGAAGCTTTCAGAATGCTTAGTCCCAACTACCGGAAAAAGAAGATTAAGGAAATG
GGTATAACGGAAGATGAGTATTACGCTAAGCAATTTGAGATTAAAGGTGATATTCCTGAG
CCTTTGGAGACTATGTGGTCTGGGCCGTTGGTGGTTCGACATGTACCACCTAGGGATTGG
CCGCCGAGGGGGTGGGAGGTTGATAAGAAGGAATTGGAGTTCATTAGAGAAGCTCATAAG
ATGCAGGCTGTGAGAGTGGACTATGATAAAGTGGAGGAGATGGTGAATAAGGAGACTGAT
GATATGAGTTTGGAACGGTATAAAGTGTTCTTGAAGCAGTATAATGAGTGGGTTGCTGCT
AACAAGGATAGATTAGAAGAAGAATCTTACAAGTATGACCAAGACTATTATCCTGGCAGG
AGAAAAAGGGGAAAGGATTACCAAGATGGAATGTATGAACTCCCATTTTACTACCCAGGA
CAGATTTGTGCTGGTAAAGTGACAGCTATACACCTTTATCAAGGAGCATTTGTTGATATT
GGAGGTGTTCATGATGGGTGGGTGCCAATAAAGCGAAATGACTGGTATTGGATCCGCCAT
CACATAAAAGTTGGTATGCATGTCATAGTTGAAATTCTGGCTAAACGTGATCCTTACAGG
TTTCGGTTCCCTATTGAGATGCGCTTTGTTGATCCTAACATAGATCACCTAATCTTTAAT
AGATTTGATTTTCCGCCTATATTTCATCGTGAAGAGGATACAAATCTAGATGAATTGCGT
CGTGATTGTGGAAGACAACCTATTCCTAGAAAAGACCCTGGAGTCAAAGTTGAAGAAGAA
CCACTACTATCAAATCACCCTTATGTGGACAAGTTATGGCAGATCCATAATGCTGAACAA
ATGATTCTGGATGACATGGAAGCAAATCCTGATAAATATGAAGGCAAAAACTTGACAGAG
TTAGCTGACGAGGAAGATTTTGATGAAGAAAATAGCACTGAGTACTCCAAAGCTTATTAT
AAGAAAGCGTTGCTTACCAAGATGATTACAAAAGTCAGCGTAAGAGAGCTTGACTTGGAA
GCTGCACTTGCTGAGCGTCAGCACCATAATAAACTGAGAATAGAAGCACAAGAACGAGGA
GAGGTGTACAAAATTTCCAAGCTGAGACGAAACATTGAGATGGATGAATACGATTTTATC
CATTGGCGTCGGTCCCTTGAGGAAAGAGAGGCTCTATTAAGAGATATAAGCTGTCGCCGA
GCTCTTGGGCTCCCACTGGAAGAGCCTGGTAGGTATGTGGATCCAAGTGCTATCAGCAAG
GATCAGTATGATCCTGAAAGTCCCTTGTATAGATATGACTACTGGGGCGAGCCAAAGAAC
TCAGAGAAGAGCAAGCAGGAGCGAATGACGGATGCTCACAATAAATCTATTGTTGGCAAA
GGTACTGTTTGGTATGAGTTGTCATATGAAGATGCCATCAAGGAGCAGATGCAGATGGAG
GCCCAAGGATTTGTGCGGGAGTTGTATGATAAAGATTCTGACAGCGACCAAGTGAATACA
GATGATGAAGATGACGAGGAAGACTTCGATTACAGCATCCTAGGCGACCCAAGTGAAAAT
ACAACCAACCAACCTTATGTCAATGGAACTGAATCTTCTCAGCTATCAGATGAAGGAATG
TTTGAAGATTAA