Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039420
CDS Infomation

pacid=37459988 polypeptide=PGSC0003DMP400026739 locus=PGSC0003DMG403015244 ID=PGSC0003DMT400039420.v4.03 annot-version=v4.03
Sequence

ATGAATAACAATAATCCAGTCAAGAATGTTAGTTTAGGAACCTCAGTTCCAATGCAAATT
CCTCAATCTATGCCGATATACCATAATCAACCAGCTGCTCGTCACTTTTCCCAGTCACCA
GCACAACGTGGTTCACATTTCCCTGGCCATTTTCAGTTATCTGAATCACGATCTCATGCC
CCATTTCAAGGTCAAGCTCAGGCCTTTAGCCATTTCATCACTTCAGGGGTTAATACCAAT
GCTGGTGTCTCATCCCCTGCTGCTTCTACACCCAATACAGCTTCTGGGGGTGCAAGAAAA
GTGCTCCATAGACCACCTTCTCGGACTGGTGGTTCATCTAACCATGGTCAAGCAACTGCT
TCTCCTTTAAAGACAATGGAATTAACCCCTGCTGTGCGTAGGAAAAAGCGAAAAGTTTCT
GACAGGTTTATACCCGATAAGGTGGCTGCGAGTTTGCCCGAGTCAGCACTTTACTCTCAG
TTGCTTGAAATCGAGGGTCGTGTAGATGCTGTTCTTTCTAGAAAGAAGATTGACATGTTG
GAATCCCTTAAGAGTCCTCCGCGTTTCCAGAAAACTCTCAGAATTTATGTATTCAATACT
TTCGCTAATCAGACACCAGCTAATCCGGACAGCGATTCTGATGAGCCAGCTTCATGGTCT
CTTAAGATTATTGGAAGGATCTTGGGAGGTGGGCCGGGTCCTCTAGCATCTGAAAAGGAG
CAGAAATTTAGTGTTGCTTGCCCCAAGTTTTCATCTTTCTTCAAGAAAGTTACTGTTTAC
TTGGATCAGAGTCTATATCCTGATAACCATGTAATTTTGTGGGATAGTTCTCGATCACCA
GCCCTTCATGAGGGTTTTGAGATCAAGAGAAAAGGGGATAAGGAGCTTACTGCAATCATC
AGACTGGAGATGAATTATATGCCTGAGAAATTTAAACTATCGCCAGCTTTGCAGGAAGTT
CTTGGTATTGAGGTTGAGACACGAGCTAGAGTTTTAGCTGCTCTGTGGTACTACATAAAA
ACTAAGAAGCTACAGATATCCCATGACACCTCCTCATTCACTTGTGATCCTTCTCTAAGG
AAGATTTTTGGAGATGAAAAGTTGAAATTTTCCCTGATTCCCCAAAAGATTAATCCGCAT
CTGACTGCCCCTCAACCTATTCACCTGGAGCACAGGATTAAGCTATCTGGAAGTAACCCA
GCTGGGAACACTTGTTATGATGTACTGGTTGATGTTCCCTTCACATTGCAGAAGGAATTG
TCCACATTCTTATCTGATTTAGAGAAGAACAAGGATATTGATGCATATGATGAAACTATT
TCCACCGCTATAAAAAAAATCCATGAACATCAGAGAAGGCGAGCTTTCTTCCTGGGATTT
AGTCAGTCACCTACCGATTTTGTTAATGCATTAGTTGCATCTCAAGCTAGGGATCTTAAG
CTTGTTTCTGATGATTCGACCCGTGATTCAGAAATGGAGAGACGTTCTGAATTCTACAAT
CAGACTTGGACTGAAGACGCCGTCGTCCGCTACTTGAACCGCAATCATGCTTCTGGTGCT
GACCATTCTGCAAGAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400026739
PEP Infomation

pacid=37459988 transcript=PGSC0003DMT400039420 locus=PGSC0003DMG403015244 ID=PGSC0003DMT400039420.v4.03 annot-version=v4.03
Sequence

MNNNNPVKNVSLGTSVPMQIPQSMPIYHNQPAARHFSQSPAQRGSHFPGHFQLSESRSHA
PFQGQAQAFSHFITSGVNTNAGVSSPAASTPNTASGGARKVLHRPPSRTGGSSNHGQATA
SPLKTMELTPAVRRKKRKVSDRFIPDKVAASLPESALYSQLLEIEGRVDAVLSRKKIDML
ESLKSPPRFQKTLRIYVFNTFANQTPANPDSDSDEPASWSLKIIGRILGGGPGPLASEKE
QKFSVACPKFSSFFKKVTVYLDQSLYPDNHVILWDSSRSPALHEGFEIKRKGDKELTAII
RLEMNYMPEKFKLSPALQEVLGIEVETRARVLAALWYYIKTKKLQISHDTSSFTCDPSLR
KIFGDEKLKFSLIPQKINPHLTAPQPIHLEHRIKLSGSNPAGNTCYDVLVDVPFTLQKEL
STFLSDLEKNKDIDAYDETISTAIKKIHEHQRRRAFFLGFSQSPTDFVNALVASQARDLK
LVSDDSTRDSEMERRSEFYNQTWTEDAVVRYLNRNHASGADHSARK*

Transcript Sequence

Transcript ID

PGSC0003DMT400039420
Transcript Infomation

pacid=37459988 locus=PGSC0003DMG403015244 ID=PGSC0003DMT400039420.v4.03 annot-version=v4.03
Sequence

ATGAATAACAATAATCCAGTCAAGAATGTTAGTTTAGGAACCTCAGTTCCAATGCAAATT
CCTCAATCTATGCCGATATACCATAATCAACCAGCTGCTCGTCACTTTTCCCAGTCACCA
GCACAACGTGGTTCACATTTCCCTGGCCATTTTCAGTTATCTGAATCACGATCTCATGCC
CCATTTCAAGGTCAAGCTCAGGCCTTTAGCCATTTCATCACTTCAGGGGTTAATACCAAT
GCTGGTGTCTCATCCCCTGCTGCTTCTACACCCAATACAGCTTCTGGGGGTGCAAGAAAA
GTGCTCCATAGACCACCTTCTCGGACTGGTGGTTCATCTAACCATGGTCAAGCAACTGCT
TCTCCTTTAAAGACAATGGAATTAACCCCTGCTGTGCGTAGGAAAAAGCGAAAAGTTTCT
GACAGGTTTATACCCGATAAGGTGGCTGCGAGTTTGCCCGAGTCAGCACTTTACTCTCAG
TTGCTTGAAATCGAGGGTCGTGTAGATGCTGTTCTTTCTAGAAAGAAGATTGACATGTTG
GAATCCCTTAAGAGTCCTCCGCGTTTCCAGAAAACTCTCAGAATTTATGTATTCAATACT
TTCGCTAATCAGACACCAGCTAATCCGGACAGCGATTCTGATGAGCCAGCTTCATGGTCT
CTTAAGATTATTGGAAGGATCTTGGGAGGTGGGCCGGGTCCTCTAGCATCTGAAAAGGAG
CAGAAATTTAGTGTTGCTTGCCCCAAGTTTTCATCTTTCTTCAAGAAAGTTACTGTTTAC
TTGGATCAGAGTCTATATCCTGATAACCATGTAATTTTGTGGGATAGTTCTCGATCACCA
GCCCTTCATGAGGGTTTTGAGATCAAGAGAAAAGGGGATAAGGAGCTTACTGCAATCATC
AGACTGGAGATGAATTATATGCCTGAGAAATTTAAACTATCGCCAGCTTTGCAGGAAGTT
CTTGGTATTGAGGTTGAGACACGAGCTAGAGTTTTAGCTGCTCTGTGGTACTACATAAAA
ACTAAGAAGCTACAGATATCCCATGACACCTCCTCATTCACTTGTGATCCTTCTCTAAGG
AAGATTTTTGGAGATGAAAAGTTGAAATTTTCCCTGATTCCCCAAAAGATTAATCCGCAT
CTGACTGCCCCTCAACCTATTCACCTGGAGCACAGGATTAAGCTATCTGGAAGTAACCCA
GCTGGGAACACTTGTTATGATGTACTGGTTGATGTTCCCTTCACATTGCAGAAGGAATTG
TCCACATTCTTATCTGATTTAGAGAAGAACAAGGATATTGATGCATATGATGAAACTATT
TCCACCGCTATAAAAAAAATCCATGAACATCAGAGAAGGCGAGCTTTCTTCCTGGGATTT
AGTCAGTCACCTACCGATTTTGTTAATGCATTAGTTGCATCTCAAGCTAGGGATCTTAAG
CTTGTTTCTGATGATTCGACCCGTGATTCAGAAATGGAGAGACGTTCTGAATTCTACAAT
CAGACTTGGACTGAAGACGCCGTCGTCCGCTACTTGAACCGCAATCATGCTTCTGGTGCT
GACCATTCTGCAAGAAAATAG