Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039412
CDS Infomation

pacid=37461275 polypeptide=PGSC0003DMP400026732 locus=PGSC0003DMG400015242 ID=PGSC0003DMT400039412.v4.03 annot-version=v4.03
Sequence

ATGTTTTTTTCTCTCTTTCTTTTCTTCATTTTAGGGTTTCTTACCCATTCCCTAAAACTT
CATCTCAAATTCACTCCTATCTATGGCCCTTCCTCTTACCCAATCCTTGGATGCCTTATT
TCCTTTTATAAAAATCGACATCGACTACTGGATTGGTACACTCAACTTTTATCTGACTCC
CCAACACAAACTATTCTAGTTCAGCGATTCGGCGCTCCTCGGACTATAATCACAGCCAAT
CCGGATAACGTTGAGTACATGCTCAAAACGAATTTTATAAATTATCCAAAGGGGAAACCG
TTTACGGATATTCTAGGTGATTTTCTAGGGCGTGGGATATTCAACGTGGACGGGGAGCTG
TGGAACGCGCAGCGTAAATTGGCTAGCCATGAGTTCAGCACAAATTCGTTGAGGGAGTTT
GTCGTTAAAACTCTGGAAGAAGTAGTCGAAAACAGGCTCATTCCGTTGTTAATTCAGGCT
GCTAAATCTGGCAAAGCGTTGGATTTGCAAGACGTGCTTAGGCGTTTCTCCTTTGATACA
ATTTGCAAGGTGTCCCTAGGTACTGACCCGCACTGCTTGGATGATCTCTCGCACGTGCCA
GTTCTCGTTGATTCGTTCGATACCGCCTCTCGAGCGTGTGCCATGCGTGGTATGGCTCCA
GTTTACGCGATTTGGAAAAGTAAAAGAGCGCTCAATTTAGGATCGGAGAAGCAGCTGAAG
GAAAACGTGAAACGCGTTCACTGTTGTATCGACGAGATCATACAGGAAAAGAAAGAAAAA
ATCATTATTAATGAAAATGGAGGGGATCTTCTGTCTAGATTATTAATTGCTGGACACGAA
GATGAAGTGTTGAGAGATATGGTTATAAGTTTCCTAATGGCGGGAAGAGACACCACTTCA
TCCGCATTGACGTGGCTTTTTTGGCTCACTACCAATCACCCTAACATCAAAAACGAAATG
ATCGATGAAATAACGTCGATCAACAATGGCGATAAGGCGCTTGAATTTGACGAATTAAAA
GAGATGAAGTATTTAGCCGCGTGCTTGAATGAATCAATGAGGCTTTATCCACCAGTAGCT
TGGGATTCTAAGCATGCGGCTAAAGACGACATATTACCAGACGGAACAAGGGTTCAAAAG
GGTAATAGAGTTACTTATTTCCCGTACGGTATGGGTCGGATGGAGGAGATTTGGGGAAAA
GATCGACTCGAATTTAAACCGGACCGTTGGATCGATGAAAACGGAGGATCGAAAAGTGTT
TGTCCGTATAAGTATCCAGTATTTCAAGCCGGTCCAAGGATGTGTTTGGGGAAAGAAATG
GCATTCACACAGATGAAGTATGTATTGGCTTCGGTTCTTAGGCGGTTCGAGATTAAACCG
GTAAATGTTGAAAAACCGGTTTTTCTGCCTCTTTTGACTGCACATATGGTTGGTGGATTC
AATGTGAGAATCTATGAGCGACTGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400026732
PEP Infomation

pacid=37461275 transcript=PGSC0003DMT400039412 locus=PGSC0003DMG400015242 ID=PGSC0003DMT400039412.v4.03 annot-version=v4.03
Sequence

MFFSLFLFFILGFLTHSLKLHLKFTPIYGPSSYPILGCLISFYKNRHRLLDWYTQLLSDS
PTQTILVQRFGAPRTIITANPDNVEYMLKTNFINYPKGKPFTDILGDFLGRGIFNVDGEL
WNAQRKLASHEFSTNSLREFVVKTLEEVVENRLIPLLIQAAKSGKALDLQDVLRRFSFDT
ICKVSLGTDPHCLDDLSHVPVLVDSFDTASRACAMRGMAPVYAIWKSKRALNLGSEKQLK
ENVKRVHCCIDEIIQEKKEKIIINENGGDLLSRLLIAGHEDEVLRDMVISFLMAGRDTTS
SALTWLFWLTTNHPNIKNEMIDEITSINNGDKALEFDELKEMKYLAACLNESMRLYPPVA
WDSKHAAKDDILPDGTRVQKGNRVTYFPYGMGRMEEIWGKDRLEFKPDRWIDENGGSKSV
CPYKYPVFQAGPRMCLGKEMAFTQMKYVLASVLRRFEIKPVNVEKPVFLPLLTAHMVGGF
NVRIYERLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400039412
Transcript Infomation

pacid=37461275 locus=PGSC0003DMG400015242 ID=PGSC0003DMT400039412.v4.03 annot-version=v4.03
Sequence

ATGTTTTTTTCTCTCTTTCTTTTCTTCATTTTAGGGTTTCTTACCCATTCCCTAAAACTT
CATCTCAAATTCACTCCTATCTATGGCCCTTCCTCTTACCCAATCCTTGGATGCCTTATT
TCCTTTTATAAAAATCGACATCGACTACTGGATTGGTACACTCAACTTTTATCTGACTCC
CCAACACAAACTATTCTAGTTCAGCGATTCGGCGCTCCTCGGACTATAATCACAGCCAAT
CCGGATAACGTTGAGTACATGCTCAAAACGAATTTTATAAATTATCCAAAGGGGAAACCG
TTTACGGATATTCTAGGTGATTTTCTAGGGCGTGGGATATTCAACGTGGACGGGGAGCTG
TGGAACGCGCAGCGTAAATTGGCTAGCCATGAGTTCAGCACAAATTCGTTGAGGGAGTTT
GTCGTTAAAACTCTGGAAGAAGTAGTCGAAAACAGGCTCATTCCGTTGTTAATTCAGGCT
GCTAAATCTGGCAAAGCGTTGGATTTGCAAGACGTGCTTAGGCGTTTCTCCTTTGATACA
ATTTGCAAGGTGTCCCTAGGTACTGACCCGCACTGCTTGGATGATCTCTCGCACGTGCCA
GTTCTCGTTGATTCGTTCGATACCGCCTCTCGAGCGTGTGCCATGCGTGGTATGGCTCCA
GTTTACGCGATTTGGAAAAGTAAAAGAGCGCTCAATTTAGGATCGGAGAAGCAGCTGAAG
GAAAACGTGAAACGCGTTCACTGTTGTATCGACGAGATCATACAGGAAAAGAAAGAAAAA
ATCATTATTAATGAAAATGGAGGGGATCTTCTGTCTAGATTATTAATTGCTGGACACGAA
GATGAAGTGTTGAGAGATATGGTTATAAGTTTCCTAATGGCGGGAAGAGACACCACTTCA
TCCGCATTGACGTGGCTTTTTTGGCTCACTACCAATCACCCTAACATCAAAAACGAAATG
ATCGATGAAATAACGTCGATCAACAATGGCGATAAGGCGCTTGAATTTGACGAATTAAAA
GAGATGAAGTATTTAGCCGCGTGCTTGAATGAATCAATGAGGCTTTATCCACCAGTAGCT
TGGGATTCTAAGCATGCGGCTAAAGACGACATATTACCAGACGGAACAAGGGTTCAAAAG
GGTAATAGAGTTACTTATTTCCCGTACGGTATGGGTCGGATGGAGGAGATTTGGGGAAAA
GATCGACTCGAATTTAAACCGGACCGTTGGATCGATGAAAACGGAGGATCGAAAAGTGTT
TGTCCGTATAAGTATCCAGTATTTCAAGCCGGTCCAAGGATGTGTTTGGGGAAAGAAATG
GCATTCACACAGATGAAGTATGTATTGGCTTCGGTTCTTAGGCGGTTCGAGATTAAACCG
GTAAATGTTGAAAAACCGGTTTTTCTGCCTCTTTTGACTGCACATATGGTTGGTGGATTC
AATGTGAGAATCTATGAGCGACTGGAATAA