Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039404
CDS Infomation

pacid=37463374 polypeptide=PGSC0003DMP400026724 locus=PGSC0003DMG400015239 ID=PGSC0003DMT400039404.v4.03 annot-version=v4.03
Sequence

ATGCTGAGATCAACTTTCACTCCCATATTAACGGCTTTTCCCTCTAAGGCCAAAAAACCC
CGCAACTACTTGAACACAATTATCACTGCAATAACAAACCCCCCACAACCTGTTCGACAA
AATGCCTCAATGGAGAATATGTTGCTACAACAGCATACTCCAACCTCAGCTTACGTTCAC
CTCCCGTTCTGTCGAAAGCGCTGTCACTACTGCGACTTCCCCATCGTCGCATTGGGGTCA
TCTTCACCTTATGGTGATGACGACCCTCGAATTATTAACTACATTGATTTCCTATGCAGA
GAAATTAAAGCCACTTCAATACCTTCCGACTACAAGTCACCTCTTGAAACCGTCTTTTTT
GGTGGAGGTACACCTTCACTTGTACCACCAAGATTAGTATCTCTAGTCCTGGAGACATTG
GACGCTAAATTCGGGGTGTGTTCTGATGCTGAAATTTCAATAGAAATGGATCCTGGTACA
TTTGATGCTAAAAAATTGAAAGATTTGATGAAGTTGGGAGTTAATAGAGTGTCGCTAGGA
GTTCAAGCATTCCAGGAGGAGTTGCTTAGGAGTTGTGGGAGAGCGCACGGTGTACAGGAA
ATTCATGAGGCTATTGACATTGTTGGATCATGTGATGTTGAGAATTGGAGTGTGGACCTT
ATATCTTCACTTCCTCATCAGAAACCACATATGTGGGAACAAAGCTTGAACCTCGCTATT
CAAGCAAAGCCGACACATGTGTCAGTTTACGATTTACAAGTTGAGCAAGATACAAAGTTT
GCATCTTTGTATACAGCTGGGGAATTCCCTCTGCCTTCTGAAAATCAAGCTGCTGATTTT
TACAGAATGGCCTCTGAAATGCTAAGAGATGCTGGTTATGAGCACTATGAGATAAGTAGC
TACTGCAAAAGTGGTTATCAATGCAAGCACAATTACACATACTGGATAAACAAACCTTTT
TATGCTTTTGGACTTGGGTCAGCCAGCTATCTTAATGGACTAAGGTTTTCAAGGCCAAGG
AAGCTGAAAGATTACATGGGTTATGTGCAAAATTTGGAGAATGGACTAGTGAATTGTTGC
CCGGACAGTAAAGTAGATGCCCAAGACGTAGCAATGGATGTTGTTATGCTGTCTTTGAGA
ACTGCTAAAGGGTTGGATTTGAAGTCATTTGGCAAAGCTTTTGGCAGCTCGACTATTCTC
TCCCTCTGTGAGGTCTATAAGCCTCATATTGAGAGTGGGCATGTTGTCTGCTTGGATGAG
CAAAGGAAAGAAATCTCCCCAGAAGAATTCAGCTCTTTGTTATCTGAAGGGACCAAGATC
AATGAGGTGTTGGCATATATCAGGCTTAGTGACCCTGATGGTTTCTTATTATCTAATGAG
TTAATATCCCTCGCGTTCAATGTGTTAGCTCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400026724
PEP Infomation

pacid=37463374 transcript=PGSC0003DMT400039404 locus=PGSC0003DMG400015239 ID=PGSC0003DMT400039404.v4.03 annot-version=v4.03
Sequence

MLRSTFTPILTAFPSKAKKPRNYLNTIITAITNPPQPVRQNASMENMLLQQHTPTSAYVH
LPFCRKRCHYCDFPIVALGSSSPYGDDDPRIINYIDFLCREIKATSIPSDYKSPLETVFF
GGGTPSLVPPRLVSLVLETLDAKFGVCSDAEISIEMDPGTFDAKKLKDLMKLGVNRVSLG
VQAFQEELLRSCGRAHGVQEIHEAIDIVGSCDVENWSVDLISSLPHQKPHMWEQSLNLAI
QAKPTHVSVYDLQVEQDTKFASLYTAGEFPLPSENQAADFYRMASEMLRDAGYEHYEISS
YCKSGYQCKHNYTYWINKPFYAFGLGSASYLNGLRFSRPRKLKDYMGYVQNLENGLVNCC
PDSKVDAQDVAMDVVMLSLRTAKGLDLKSFGKAFGSSTILSLCEVYKPHIESGHVVCLDE
QRKEISPEEFSSLLSEGTKINEVLAYIRLSDPDGFLLSNELISLAFNVLAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400039404
Transcript Infomation

pacid=37463374 locus=PGSC0003DMG400015239 ID=PGSC0003DMT400039404.v4.03 annot-version=v4.03
Sequence

ATGCTGAGATCAACTTTCACTCCCATATTAACGGCTTTTCCCTCTAAGGCCAAAAAACCC
CGCAACTACTTGAACACAATTATCACTGCAATAACAAACCCCCCACAACCTGTTCGACAA
AATGCCTCAATGGAGAATATGTTGCTACAACAGCATACTCCAACCTCAGCTTACGTTCAC
CTCCCGTTCTGTCGAAAGCGCTGTCACTACTGCGACTTCCCCATCGTCGCATTGGGGTCA
TCTTCACCTTATGGTGATGACGACCCTCGAATTATTAACTACATTGATTTCCTATGCAGA
GAAATTAAAGCCACTTCAATACCTTCCGACTACAAGTCACCTCTTGAAACCGTCTTTTTT
GGTGGAGGTACACCTTCACTTGTACCACCAAGATTAGTATCTCTAGTCCTGGAGACATTG
GACGCTAAATTCGGGGTGTGTTCTGATGCTGAAATTTCAATAGAAATGGATCCTGGTACA
TTTGATGCTAAAAAATTGAAAGATTTGATGAAGTTGGGAGTTAATAGAGTGTCGCTAGGA
GTTCAAGCATTCCAGGAGGAGTTGCTTAGGAGTTGTGGGAGAGCGCACGGTGTACAGGAA
ATTCATGAGGCTATTGACATTGTTGGATCATGTGATGTTGAGAATTGGAGTGTGGACCTT
ATATCTTCACTTCCTCATCAGAAACCACATATGTGGGAACAAAGCTTGAACCTCGCTATT
CAAGCAAAGCCGACACATGTGTCAGTTTACGATTTACAAGTTGAGCAAGATACAAAGTTT
GCATCTTTGTATACAGCTGGGGAATTCCCTCTGCCTTCTGAAAATCAAGCTGCTGATTTT
TACAGAATGGCCTCTGAAATGCTAAGAGATGCTGGTTATGAGCACTATGAGATAAGTAGC
TACTGCAAAAGTGGTTATCAATGCAAGCACAATTACACATACTGGATAAACAAACCTTTT
TATGCTTTTGGACTTGGGTCAGCCAGCTATCTTAATGGACTAAGGTTTTCAAGGCCAAGG
AAGCTGAAAGATTACATGGGTTATGTGCAAAATTTGGAGAATGGACTAGTGAATTGTTGC
CCGGACAGTAAAGTAGATGCCCAAGACGTAGCAATGGATGTTGTTATGCTGTCTTTGAGA
ACTGCTAAAGGGTTGGATTTGAAGTCATTTGGCAAAGCTTTTGGCAGCTCGACTATTCTC
TCCCTCTGTGAGGTCTATAAGCCTCATATTGAGAGTGGGCATGTTGTCTGCTTGGATGAG
CAAAGGAAAGAAATCTCCCCAGAAGAATTCAGCTCTTTGTTATCTGAAGGGACCAAGATC
AATGAGGTGTTGGCATATATCAGGCTTAGTGACCCTGATGGTTTCTTATTATCTAATGAG
TTAATATCCCTCGCGTTCAATGTGTTAGCTCCATAA