Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039389
CDS Infomation

pacid=37463607 polypeptide=PGSC0003DMP400026714 locus=PGSC0003DMG400015232 ID=PGSC0003DMT400039389.v4.03 annot-version=v4.03
Sequence

ATGGCGCTCAAACACTCCTTTATCCCGTCTTCTACTTCCTGTACATTACAGGCAAATCAC
TACTACTATTCCCTTTACCCTTTGAGAATTGGAAGAAATCCCATATACTTAAGACCCTTC
TCTCAATCATCCTCCCCTGTTTTCTCTAACTCTTCCATTCCTCGGTCTACACCTTCCTCC
CTTTTCCTTTCTTTTCTTGAAGAAGATGAAGAAGAAGAAGTAGTAGACGAGGAAGAAGAA
AGACTTATTCTTTCAGAAACCCAGGAGTTAAATCAACCAGACAATGACCCAATTCGCCGG
TTCTTCCAGACCCAGACAGCAGACCAAGAATCCGACCCAGACCCAGGTAGTCTAGGCAAG
TTATCTCTTCAAGAGAACCGTAAAACATCTTGGCACCTTGCTTCTATCACTGCTTCAACT
GAAGACGATGACGACGAAGTCGAAGATATTCAGAATTCGCTACTCGATACACTCCCCCCA
AGTCCTAGAGTTGAGGGGATTGTCAGTCAAATAGTGGAGAAGGCGAAGAGCTTACCGGAA
AATGTGACCTTAGGTGAAGTATTAAGTGAATTTGAAGGGAGGGTTGGACAGGAAGACTGT
GAGGAAGTGTTGGGTTTGCTGGGAAATGAAGGTTTGGCGATTGATTGCTTGTATTTTTTC
GAATGGATGGGGCTTAATGAACCTTCATTGGTAACACCTCGTGCATATAAGGTTCTGTTC
CTGATACTTGGGAGGGCTGGTATGAGCAAGGAGTTACTAGTTTTGTTTAAGAACTTGCCT
AATCGAAAGGGGTTCAGGGACGTCCATGTTTATAATGCAGCTATTTCCGGACTTTTATGC
TGTAGAAGGTATGATGATGCTTGGGAAATTTATCAGTCCATGGAAACAAATTCTGTCCAA
CCAGACCATGTGACGAGTTCCATTATGATTACAATAATGAGGAAACGGGGCAATAGTGCC
AAAGAAGCTTGGGAGTTATTCGAAAAGATGAATAAAGAAGGTGTGAAGTGGAGCTTAGAA
GTAGCAGGTGCTCTAATTAAATCCTTTTGTGATGAAGGCCTGAAGAAGGAAGCTTTAATT
ATCCAGTTGGAAATGGAGAAAAGGGGTTTATCTTCTAATGCCATTGTCTATAATACTCTG
ATGCATGCTTACTGTAAATCTAACCAAATTGAAGAAGCTGAAGGTCTCTTTACTGAGATG
AAGAAGAAAAGAATTGCACCTACCTCGGCTACTTATAATACTTTGATGGATGCATACAGT
AGGAGACTCCAGCCTGATGTTGTTGAGAAGCTGCTACAGGAAATGGAAGATGCTGGTTTG
GAGCCAAATGTGAAATCATATACATGCCTGATCAGTGCCTATGGAAGATTGAAGAAAATG
AGTGACTTGGCTGCAAATGCATTCTTGAGGATGACAAAGGTTGGTATAAAACCAAATTCT
TACTCGTATACAGCTCTTATTCATGCCTATTCAGTCAGTGGGTGGCATGATAAAGCTTAC
ACAGCTTTTGAGAATATGCAAAGGGAGGGAATAAAACCCTCCATAGAAACTTATACTGCT
CTTCTTGATGCATTTAGACGTGCTGGTGATACCCAAACACTCATGAAAATTTGGAAAATG
ATGATCAGAGAGAAAATTGAAGGGACAAGGGTGACATTTAACATTCTACTGGATGGATTT
GCTAAACAGGGTTGCTATGTCGAAGCAAGAGATGTAATTTGTGAGTTTGGGAAGCTTAGG
TTACAACCAACAGTAATGACATACAACATGTTGATCAATGCATATGCGAGGGGAGGGCAA
GAATCAAGGTTGCCACAGCTTTTGAAGGAGATGTCAGCACTTAATCTAAAAGCTGATTCT
ATTACATATTCCACAATGATATATGCCTTCATCCGCGTGCGGGATTATAAGAGAGCATTT
TATTTTCACAAGCAGATGGTAAAAAACCGGCAAGTGCCTGATGCTGAATCATATGAGAAG
CTCCGGGCAATTCTGGATGTAAAAGCTGCCATAAAGAACAGGAAGGATAAGAGTGCTTTA
ATGGGAATAGTTAGAAGCAGTATGGGCTTAATGAAAGAAAAGAAAAAGGGAAAGAAGGAT
GAGTTCTGGAAAAATAGAAAAAAAGGATCAAGATTTCAAGGAGGACAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026714
PEP Infomation

pacid=37463607 transcript=PGSC0003DMT400039389 locus=PGSC0003DMG400015232 ID=PGSC0003DMT400039389.v4.03 annot-version=v4.03
Sequence

MALKHSFIPSSTSCTLQANHYYYSLYPLRIGRNPIYLRPFSQSSSPVFSNSSIPRSTPSS
LFLSFLEEDEEEEVVDEEEERLILSETQELNQPDNDPIRRFFQTQTADQESDPDPGSLGK
LSLQENRKTSWHLASITASTEDDDDEVEDIQNSLLDTLPPSPRVEGIVSQIVEKAKSLPE
NVTLGEVLSEFEGRVGQEDCEEVLGLLGNEGLAIDCLYFFEWMGLNEPSLVTPRAYKVLF
LILGRAGMSKELLVLFKNLPNRKGFRDVHVYNAAISGLLCCRRYDDAWEIYQSMETNSVQ
PDHVTSSIMITIMRKRGNSAKEAWELFEKMNKEGVKWSLEVAGALIKSFCDEGLKKEALI
IQLEMEKRGLSSNAIVYNTLMHAYCKSNQIEEAEGLFTEMKKKRIAPTSATYNTLMDAYS
RRLQPDVVEKLLQEMEDAGLEPNVKSYTCLISAYGRLKKMSDLAANAFLRMTKVGIKPNS
YSYTALIHAYSVSGWHDKAYTAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKM
MIREKIEGTRVTFNILLDGFAKQGCYVEARDVICEFGKLRLQPTVMTYNMLINAYARGGQ
ESRLPQLLKEMSALNLKADSITYSTMIYAFIRVRDYKRAFYFHKQMVKNRQVPDAESYEK
LRAILDVKAAIKNRKDKSALMGIVRSSMGLMKEKKKGKKDEFWKNRKKGSRFQGGQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400039389
Transcript Infomation

pacid=37463607 locus=PGSC0003DMG400015232 ID=PGSC0003DMT400039389.v4.03 annot-version=v4.03
Sequence

ATGGCGCTCAAACACTCCTTTATCCCGTCTTCTACTTCCTGTACATTACAGGCAAATCAC
TACTACTATTCCCTTTACCCTTTGAGAATTGGAAGAAATCCCATATACTTAAGACCCTTC
TCTCAATCATCCTCCCCTGTTTTCTCTAACTCTTCCATTCCTCGGTCTACACCTTCCTCC
CTTTTCCTTTCTTTTCTTGAAGAAGATGAAGAAGAAGAAGTAGTAGACGAGGAAGAAGAA
AGACTTATTCTTTCAGAAACCCAGGAGTTAAATCAACCAGACAATGACCCAATTCGCCGG
TTCTTCCAGACCCAGACAGCAGACCAAGAATCCGACCCAGACCCAGGTAGTCTAGGCAAG
TTATCTCTTCAAGAGAACCGTAAAACATCTTGGCACCTTGCTTCTATCACTGCTTCAACT
GAAGACGATGACGACGAAGTCGAAGATATTCAGAATTCGCTACTCGATACACTCCCCCCA
AGTCCTAGAGTTGAGGGGATTGTCAGTCAAATAGTGGAGAAGGCGAAGAGCTTACCGGAA
AATGTGACCTTAGGTGAAGTATTAAGTGAATTTGAAGGGAGGGTTGGACAGGAAGACTGT
GAGGAAGTGTTGGGTTTGCTGGGAAATGAAGGTTTGGCGATTGATTGCTTGTATTTTTTC
GAATGGATGGGGCTTAATGAACCTTCATTGGTAACACCTCGTGCATATAAGGTTCTGTTC
CTGATACTTGGGAGGGCTGGTATGAGCAAGGAGTTACTAGTTTTGTTTAAGAACTTGCCT
AATCGAAAGGGGTTCAGGGACGTCCATGTTTATAATGCAGCTATTTCCGGACTTTTATGC
TGTAGAAGGTATGATGATGCTTGGGAAATTTATCAGTCCATGGAAACAAATTCTGTCCAA
CCAGACCATGTGACGAGTTCCATTATGATTACAATAATGAGGAAACGGGGCAATAGTGCC
AAAGAAGCTTGGGAGTTATTCGAAAAGATGAATAAAGAAGGTGTGAAGTGGAGCTTAGAA
GTAGCAGGTGCTCTAATTAAATCCTTTTGTGATGAAGGCCTGAAGAAGGAAGCTTTAATT
ATCCAGTTGGAAATGGAGAAAAGGGGTTTATCTTCTAATGCCATTGTCTATAATACTCTG
ATGCATGCTTACTGTAAATCTAACCAAATTGAAGAAGCTGAAGGTCTCTTTACTGAGATG
AAGAAGAAAAGAATTGCACCTACCTCGGCTACTTATAATACTTTGATGGATGCATACAGT
AGGAGACTCCAGCCTGATGTTGTTGAGAAGCTGCTACAGGAAATGGAAGATGCTGGTTTG
GAGCCAAATGTGAAATCATATACATGCCTGATCAGTGCCTATGGAAGATTGAAGAAAATG
AGTGACTTGGCTGCAAATGCATTCTTGAGGATGACAAAGGTTGGTATAAAACCAAATTCT
TACTCGTATACAGCTCTTATTCATGCCTATTCAGTCAGTGGGTGGCATGATAAAGCTTAC
ACAGCTTTTGAGAATATGCAAAGGGAGGGAATAAAACCCTCCATAGAAACTTATACTGCT
CTTCTTGATGCATTTAGACGTGCTGGTGATACCCAAACACTCATGAAAATTTGGAAAATG
ATGATCAGAGAGAAAATTGAAGGGACAAGGGTGACATTTAACATTCTACTGGATGGATTT
GCTAAACAGGGTTGCTATGTCGAAGCAAGAGATGTAATTTGTGAGTTTGGGAAGCTTAGG
TTACAACCAACAGTAATGACATACAACATGTTGATCAATGCATATGCGAGGGGAGGGCAA
GAATCAAGGTTGCCACAGCTTTTGAAGGAGATGTCAGCACTTAATCTAAAAGCTGATTCT
ATTACATATTCCACAATGATATATGCCTTCATCCGCGTGCGGGATTATAAGAGAGCATTT
TATTTTCACAAGCAGATGGTAAAAAACCGGCAAGTGCCTGATGCTGAATCATATGAGAAG
CTCCGGGCAATTCTGGATGTAAAAGCTGCCATAAAGAACAGGAAGGATAAGAGTGCTTTA
ATGGGAATAGTTAGAAGCAGTATGGGCTTAATGAAAGAAAAGAAAAAGGGAAAGAAGGAT
GAGTTCTGGAAAAATAGAAAAAAAGGATCAAGATTTCAAGGAGGACAGTAA