Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039387
CDS Infomation

pacid=37459247 polypeptide=PGSC0003DMP400026713 locus=PGSC0003DMG400015231 ID=PGSC0003DMT400039387.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCGAAAACCAGGACCCGGCTATTCGGATCCTCTGCCGGAGGCTCCAGATTATC
AAGAACGAATCGGGTCTTCAATGGCTCATCGGCTCTCCATTCTTCCCTCGCTACACCGTT
ATCTCTACTTTCCGATGTATCCACACTACCTCCTCCAATCCTTTATCGCCGGATTTCTCT
AAAGAATCAGATGATATAAGAACATTGCTCCCCAAGGGTTTTGAAGTTATTGGAGCTTTA
ATTGTCGGAAAAGACTGTAATTTTGACAAAATCGCAAAGGAGGCGATTAATGCAGCTTGT
AATATGAGGAAAAGTTTGTCCAGTGATGCAAATTTGGGGAATCAGGAGCTGATTGGGGCT
GTGGTGGATTTGAATAACGCTAAGGATGTTCGTTTTTTCATGTCCAAGGATGGACAATTG
GACAGTCTTGAGAGTGTTAGTTCAATTGTGTATGAAGACAATCCTGAAAAGTTTGTTTGG
GAAAGAGGTTGTTTGCTCCATTGTGCTCTTCAAGTAAAGTTGCCTTTATATTATCAGCCA
AGCAAACCTAATGATGTACATGAGATATATATGCGTGCAGCTGATGCTGCTGCTAGTAAA
TTCAGAGACCCACAAGTTACTTGCCTAATAGAAGCTTTAAATGAAACTTCTGGTGCTATT
GTTCTTCGTGGTTCAGAACTGAGCACAGATAGTTCAAGTTCTTCCTCTGAACTTAAAGGT
TCTGATACAAAAGCTTTGTTATGTTCACACTTCTCTTCAAGGAGCAAAGATATTACCTCA
TTTTCTTCAATAGAGGAGAGTGCAGATAAAATCCAAGTAAGCTTTCTGCTGAACAAATCA
ATGAATTCTGTGAAACCTTCTGCACCTATTGCTGAATATTATCCAGCCACCCAAGAAACT
CAACTTCTGGTCGTAGGTCATAAACTAGAAGTGCTTTGTTATGCATCAAAAGATCTTTCG
CTGGCTTATGGCATTTCAAAGTTGGTCATCCCTGCACTAGTTGACCAGTTACACTCCATG
AGGAAAGTTAGTATTCCTGACCTTTTAAAAAGGCATCCAGAGTTGCATCCATATCACTTC
CTTCCTCCAGGAATTTTACATCCGATTACAGTCTTATATGAACTTAGTTATGGTGAGACA
GAACTGAAGCAAGTTGAAACAAGAAGATCCCTTCATTTGAGACTTGGTTTACCTTTTGAT
CGCCCTCTTCTAAGAATTTCAAATGCCATTGATATAGTAGGGAAGAAACATAGTAGCAAC
TTAGTCCAGAAAGGTTCTTCTTTTCTCAAGGATGTACATTTGACAATACCAAGTAGTGGT
GTTTCCGGAGGTGTGGCTTCTCTGGTTCAAGGTTCTTATCAGTACTACCATTACCTCCAC
GAGGGACTTGATGACTCGGGTTGGGGCTGTGCTTATCGCTCTCTGCAGACAATCATTTCA
TGGTTCAAGTTGCAAAATTACACTTCAATTGATGTCCCATCACACAGGGAAATACAACAG
GCACTAGTAGAGATTGGTGACAAAGATCCTTCATTTATAGGGTCACGTGAATGGATTGGA
GCCATTGAACTGAGTTTTGTGTTGGATAAACTAATTGGAGCTAGTTGCAAAATCATAAAC
GTCAGATCTGGCGCCGAGCTTCCTGAAAAGTGTCGAGAGTTGGCATTGCATTTTGAGAAT
CAAGGAACTCCTATCATGATTGGTGGTGGTGTTCTTGCCTACACTCTCCTGGGCGTGGAT
TACAATGATGCAAGCGGAGATTGTGCTTTCCTTATACTAGATCCTCATTATACCGGCAGT
GATGATATCAAGAAAATAGTAAATGGTGGATGGTGTGGATGGAAGAAAGCTGTTGATAGC
AAAGGAAAGCACTTTTTCTTGCATGATAAGTTCTATAACCTTCTGCTCCCTCAACGACCT
AATATGGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026713
PEP Infomation

pacid=37459247 transcript=PGSC0003DMT400039387 locus=PGSC0003DMG400015231 ID=PGSC0003DMT400039387.v4.03 annot-version=v4.03
Sequence

MASENQDPAIRILCRRLQIIKNESGLQWLIGSPFFPRYTVISTFRCIHTTSSNPLSPDFS
KESDDIRTLLPKGFEVIGALIVGKDCNFDKIAKEAINAACNMRKSLSSDANLGNQELIGA
VVDLNNAKDVRFFMSKDGQLDSLESVSSIVYEDNPEKFVWERGCLLHCALQVKLPLYYQP
SKPNDVHEIYMRAADAAASKFRDPQVTCLIEALNETSGAIVLRGSELSTDSSSSSSELKG
SDTKALLCSHFSSRSKDITSFSSIEESADKIQVSFLLNKSMNSVKPSAPIAEYYPATQET
QLLVVGHKLEVLCYASKDLSLAYGISKLVIPALVDQLHSMRKVSIPDLLKRHPELHPYHF
LPPGILHPITVLYELSYGETELKQVETRRSLHLRLGLPFDRPLLRISNAIDIVGKKHSSN
LVQKGSSFLKDVHLTIPSSGVSGGVASLVQGSYQYYHYLHEGLDDSGWGCAYRSLQTIIS
WFKLQNYTSIDVPSHREIQQALVEIGDKDPSFIGSREWIGAIELSFVLDKLIGASCKIIN
VRSGAELPEKCRELALHFENQGTPIMIGGGVLAYTLLGVDYNDASGDCAFLILDPHYTGS
DDIKKIVNGGWCGWKKAVDSKGKHFFLHDKFYNLLLPQRPNMV*

Transcript Sequence

Transcript ID

PGSC0003DMT400039387
Transcript Infomation

pacid=37459247 locus=PGSC0003DMG400015231 ID=PGSC0003DMT400039387.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCGAAAACCAGGACCCGGCTATTCGGATCCTCTGCCGGAGGCTCCAGATTATC
AAGAACGAATCGGGTCTTCAATGGCTCATCGGCTCTCCATTCTTCCCTCGCTACACCGTT
ATCTCTACTTTCCGATGTATCCACACTACCTCCTCCAATCCTTTATCGCCGGATTTCTCT
AAAGAATCAGATGATATAAGAACATTGCTCCCCAAGGGTTTTGAAGTTATTGGAGCTTTA
ATTGTCGGAAAAGACTGTAATTTTGACAAAATCGCAAAGGAGGCGATTAATGCAGCTTGT
AATATGAGGAAAAGTTTGTCCAGTGATGCAAATTTGGGGAATCAGGAGCTGATTGGGGCT
GTGGTGGATTTGAATAACGCTAAGGATGTTCGTTTTTTCATGTCCAAGGATGGACAATTG
GACAGTCTTGAGAGTGTTAGTTCAATTGTGTATGAAGACAATCCTGAAAAGTTTGTTTGG
GAAAGAGGTTGTTTGCTCCATTGTGCTCTTCAAGTAAAGTTGCCTTTATATTATCAGCCA
AGCAAACCTAATGATGTACATGAGATATATATGCGTGCAGCTGATGCTGCTGCTAGTAAA
TTCAGAGACCCACAAGTTACTTGCCTAATAGAAGCTTTAAATGAAACTTCTGGTGCTATT
GTTCTTCGTGGTTCAGAACTGAGCACAGATAGTTCAAGTTCTTCCTCTGAACTTAAAGGT
TCTGATACAAAAGCTTTGTTATGTTCACACTTCTCTTCAAGGAGCAAAGATATTACCTCA
TTTTCTTCAATAGAGGAGAGTGCAGATAAAATCCAAGTAAGCTTTCTGCTGAACAAATCA
ATGAATTCTGTGAAACCTTCTGCACCTATTGCTGAATATTATCCAGCCACCCAAGAAACT
CAACTTCTGGTCGTAGGTCATAAACTAGAAGTGCTTTGTTATGCATCAAAAGATCTTTCG
CTGGCTTATGGCATTTCAAAGTTGGTCATCCCTGCACTAGTTGACCAGTTACACTCCATG
AGGAAAGTTAGTATTCCTGACCTTTTAAAAAGGCATCCAGAGTTGCATCCATATCACTTC
CTTCCTCCAGGAATTTTACATCCGATTACAGTCTTATATGAACTTAGTTATGGTGAGACA
GAACTGAAGCAAGTTGAAACAAGAAGATCCCTTCATTTGAGACTTGGTTTACCTTTTGAT
CGCCCTCTTCTAAGAATTTCAAATGCCATTGATATAGTAGGGAAGAAACATAGTAGCAAC
TTAGTCCAGAAAGGTTCTTCTTTTCTCAAGGATGTACATTTGACAATACCAAGTAGTGGT
GTTTCCGGAGGTGTGGCTTCTCTGGTTCAAGGTTCTTATCAGTACTACCATTACCTCCAC
GAGGGACTTGATGACTCGGGTTGGGGCTGTGCTTATCGCTCTCTGCAGACAATCATTTCA
TGGTTCAAGTTGCAAAATTACACTTCAATTGATGTCCCATCACACAGGGAAATACAACAG
GCACTAGTAGAGATTGGTGACAAAGATCCTTCATTTATAGGGTCACGTGAATGGATTGGA
GCCATTGAACTGAGTTTTGTGTTGGATAAACTAATTGGAGCTAGTTGCAAAATCATAAAC
GTCAGATCTGGCGCCGAGCTTCCTGAAAAGTGTCGAGAGTTGGCATTGCATTTTGAGAAT
CAAGGAACTCCTATCATGATTGGTGGTGGTGTTCTTGCCTACACTCTCCTGGGCGTGGAT
TACAATGATGCAAGCGGAGATTGTGCTTTCCTTATACTAGATCCTCATTATACCGGCAGT
GATGATATCAAGAAAATAGTAAATGGTGGATGGTGTGGATGGAAGAAAGCTGTTGATAGC
AAAGGAAAGCACTTTTTCTTGCATGATAAGTTCTATAACCTTCTGCTCCCTCAACGACCT
AATATGGTCTAG