Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039342
CDS Infomation

pacid=37462421 polypeptide=PGSC0003DMP400026695 locus=PGSC0003DMG400015215 ID=PGSC0003DMT400039342.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGCTCTGTCTCCGGCCACCACCCTCCGCCTTAAACCCTTCTACGCCGTCCGG
TTCTTCACTCATTACAGAAGACCTATCAAAGTCTTAAACCCCAATTTCTACTCATCATAC
CCTCCAAAGCTGCATCCAACACCCTACTTGAGCCGTCGACGGAGCTTTTGCTCTGTGGTT
TCCGCCGCTATTTCATCCGGAGAAGCAGTTGAAAGACCCAAATTTGAAAATATTGAGACA
AAAGAGGGTGTAAAAACTGAACAAGTTAGGGAATTTCGGAAAAGGTTGAGGGTTGCGGAC
ATAAAGGGAGGGCCTGAAGAAGGTTTGGACCGTCTTGGTGAGACTTTGGTGGTTAGAGGA
TGGGTTCGCACGGTTAGGGCTCAGAGCAGTGTGACGTTTATTGATATTAATGATGGTTCT
TGTCTTTCAAATATGCAATGTGTTATGGGTTCTGATGCTGAGGGTTATGATCAGGTGGAG
AATGGCTTAATTTCAACTGGTGCATCAGTATGGATTGAAGGTACTGTAGTCAGCAGCCAA
GGGTCAAAGCAGAAAATTGAGTTGAAGGTTCAGAAACTTGTAGTGGTTGGTAAAAGTGAT
CCTTCTTTCCCCATCCAGAAGAAAAGGGTCAGCAGAGAATTCTTGAGAACAAAGGCTCAC
CTTCGCCCTCGAACAAACACTTTTGGTGCGGTTTCGAGGGTGAGGAATGCTTTATCCTAT
GCCACACACAAGTTTTTCCAAGAAAATGGCTTTGTTTGGGTCTCAAGTCCAATAATCACT
GCTTCTGATTGTGAAGGAGCTGGCGAGCAATTCTGTGTTACTACATTGATTCCAAACTCC
AACGAAGGTGGAGATTCACCAGTTAGTGCTATTCCTACTACTGAATCTGGTTCTGTTGAC
TGGTCACAAGACTTCTTTGGGAAACGAGCATATTTAACAGTGTCTGGGCAACTCAATGGT
GAAACATATGCTACTGCGCTCTCCGATATCTACACCTTTGGCCCTACATTCAGAGCAGAA
AATTCTAACACTTCCAGACACTTAGCCGAATTCTGGATGATTGAACCAGAACTAGCTTTT
GCGGACTTGGATGATGACATGGCCTGTGCTACTGCCTATCTCCAGTATGTAGTATGTTAC
TTTTCACATCTCGCTGTTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026695
PEP Infomation

pacid=37462421 transcript=PGSC0003DMT400039342 locus=PGSC0003DMG400015215 ID=PGSC0003DMT400039342.v4.03 annot-version=v4.03
Sequence

MAGALSPATTLRLKPFYAVRFFTHYRRPIKVLNPNFYSSYPPKLHPTPYLSRRRSFCSVV
SAAISSGEAVERPKFENIETKEGVKTEQVREFRKRLRVADIKGGPEEGLDRLGETLVVRG
WVRTVRAQSSVTFIDINDGSCLSNMQCVMGSDAEGYDQVENGLISTGASVWIEGTVVSSQ
GSKQKIELKVQKLVVVGKSDPSFPIQKKRVSREFLRTKAHLRPRTNTFGAVSRVRNALSY
ATHKFFQENGFVWVSSPIITASDCEGAGEQFCVTTLIPNSNEGGDSPVSAIPTTESGSVD
WSQDFFGKRAYLTVSGQLNGETYATALSDIYTFGPTFRAENSNTSRHLAEFWMIEPELAF
ADLDDDMACATAYLQYVVCYFSHLAVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400039342
Transcript Infomation

pacid=37462421 locus=PGSC0003DMG400015215 ID=PGSC0003DMT400039342.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGCTCTGTCTCCGGCCACCACCCTCCGCCTTAAACCCTTCTACGCCGTCCGG
TTCTTCACTCATTACAGAAGACCTATCAAAGTCTTAAACCCCAATTTCTACTCATCATAC
CCTCCAAAGCTGCATCCAACACCCTACTTGAGCCGTCGACGGAGCTTTTGCTCTGTGGTT
TCCGCCGCTATTTCATCCGGAGAAGCAGTTGAAAGACCCAAATTTGAAAATATTGAGACA
AAAGAGGGTGTAAAAACTGAACAAGTTAGGGAATTTCGGAAAAGGTTGAGGGTTGCGGAC
ATAAAGGGAGGGCCTGAAGAAGGTTTGGACCGTCTTGGTGAGACTTTGGTGGTTAGAGGA
TGGGTTCGCACGGTTAGGGCTCAGAGCAGTGTGACGTTTATTGATATTAATGATGGTTCT
TGTCTTTCAAATATGCAATGTGTTATGGGTTCTGATGCTGAGGGTTATGATCAGGTGGAG
AATGGCTTAATTTCAACTGGTGCATCAGTATGGATTGAAGGTACTGTAGTCAGCAGCCAA
GGGTCAAAGCAGAAAATTGAGTTGAAGGTTCAGAAACTTGTAGTGGTTGGTAAAAGTGAT
CCTTCTTTCCCCATCCAGAAGAAAAGGGTCAGCAGAGAATTCTTGAGAACAAAGGCTCAC
CTTCGCCCTCGAACAAACACTTTTGGTGCGGTTTCGAGGGTGAGGAATGCTTTATCCTAT
GCCACACACAAGTTTTTCCAAGAAAATGGCTTTGTTTGGGTCTCAAGTCCAATAATCACT
GCTTCTGATTGTGAAGGAGCTGGCGAGCAATTCTGTGTTACTACATTGATTCCAAACTCC
AACGAAGGTGGAGATTCACCAGTTAGTGCTATTCCTACTACTGAATCTGGTTCTGTTGAC
TGGTCACAAGACTTCTTTGGGAAACGAGCATATTTAACAGTGTCTGGGCAACTCAATGGT
GAAACATATGCTACTGCGCTCTCCGATATCTACACCTTTGGCCCTACATTCAGAGCAGAA
AATTCTAACACTTCCAGACACTTAGCCGAATTCTGGATGATTGAACCAGAACTAGCTTTT
GCGGACTTGGATGATGACATGGCCTGTGCTACTGCCTATCTCCAGTATGTAGTATGTTAC
TTTTCACATCTCGCTGTTCCTTAG