Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039335
CDS Infomation

pacid=37463330 polypeptide=PGSC0003DMP400026690 locus=PGSC0003DMG400015212 ID=PGSC0003DMT400039335.v4.03 annot-version=v4.03
Sequence

ATGGATTTGGATCAGTGGATTACGACGGTGAAAGAGGGGCAGCATTTGGCGGAGGACGAG
CTTCAGCTCCTTTGTGAATATGTTAAGGAAATCCTGATAGAGGAGTCAAATGTGCAGCCC
GTCAATAGTCCAGTTACTGTTTGTGGAGACATCCATGGCCAGTTTCATGATCTAATGAAA
CTTTTCCAGACTGGAGGTCATGTACCTGATACAAATTACATTTTCATGGGAGATTTTGTT
GACCGTGGATACAATAGTCTAGAAGTTTTTACAATTTTGTTACTCCTTAAAGCAAGATAC
CCAGCCAACATTACTCTTTTACGTGGAAATCACGAGAGCAGACAACTAACACAGGTCTAT
GGATTCTATGATGAGTGTCAAAGGAAGTATGGAAATGCAAATGCATGGCGGTACTGCACT
GATGTTTTTGACTATCTTACTCTCTCGGCAATCATAGACGGAACAGTATTATGTGTCCAC
GGTGGACTTTCTCCTGATGTTAGAACTATTGATCAGATCAGAGTCATTGACCGTAATTGT
GAAATTCCCCATGAAGGGCCTTTCTGCGACCTTATGTGGAGTGACCCCGAAGATATTGAA
ACATGGGCAGTAAGTCCTCGAGGAGCAGGTTGGCTTTTTGGATCCAGGGTTACCTCTGAG
TTCAATCACATTAATAAACTAGATCTAGTTTGCCGGGCTCACCAGCTTGTCCAGGAAGGT
TTGAAGTACATGTTTCAAGATAAAGGACTGGTGACAGTGTGGTCTGCTCCCAACTATTGT
TACCGATGTGGAAATGTTGCTTCAATATTGAGCTTCAATGAGAATATGGTAGTATTGCTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400026690
PEP Infomation

pacid=37463330 transcript=PGSC0003DMT400039335 locus=PGSC0003DMG400015212 ID=PGSC0003DMT400039335.v4.03 annot-version=v4.03
Sequence

MDLDQWITTVKEGQHLAEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMK
LFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVY
GFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRVIDRNC
EIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINKLDLVCRAHQLVQEG
LKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMVVLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400039335
Transcript Infomation

pacid=37463330 locus=PGSC0003DMG400015212 ID=PGSC0003DMT400039335.v4.03 annot-version=v4.03
Sequence

ATGGATTTGGATCAGTGGATTACGACGGTGAAAGAGGGGCAGCATTTGGCGGAGGACGAG
CTTCAGCTCCTTTGTGAATATGTTAAGGAAATCCTGATAGAGGAGTCAAATGTGCAGCCC
GTCAATAGTCCAGTTACTGTTTGTGGAGACATCCATGGCCAGTTTCATGATCTAATGAAA
CTTTTCCAGACTGGAGGTCATGTACCTGATACAAATTACATTTTCATGGGAGATTTTGTT
GACCGTGGATACAATAGTCTAGAAGTTTTTACAATTTTGTTACTCCTTAAAGCAAGATAC
CCAGCCAACATTACTCTTTTACGTGGAAATCACGAGAGCAGACAACTAACACAGGTCTAT
GGATTCTATGATGAGTGTCAAAGGAAGTATGGAAATGCAAATGCATGGCGGTACTGCACT
GATGTTTTTGACTATCTTACTCTCTCGGCAATCATAGACGGAACAGTATTATGTGTCCAC
GGTGGACTTTCTCCTGATGTTAGAACTATTGATCAGATCAGAGTCATTGACCGTAATTGT
GAAATTCCCCATGAAGGGCCTTTCTGCGACCTTATGTGGAGTGACCCCGAAGATATTGAA
ACATGGGCAGTAAGTCCTCGAGGAGCAGGTTGGCTTTTTGGATCCAGGGTTACCTCTGAG
TTCAATCACATTAATAAACTAGATCTAGTTTGCCGGGCTCACCAGCTTGTCCAGGAAGGT
TTGAAGTACATGTTTCAAGATAAAGGACTGGTGACAGTGTGGTCTGCTCCCAACTATTGT
TACCGATGTGGAAATGTTGCTTCAATATTGAGCTTCAATGAGAATATGGTAGTATTGCTA
TAA