Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039329
CDS Infomation

pacid=37460518 polypeptide=PGSC0003DMP400026685 locus=PGSC0003DMG402015209 ID=PGSC0003DMT400039329.v4.03 annot-version=v4.03
Sequence

ATGGCTGGACTGGAGGAATTGAAGAAGAAACTTGTGCCTTTGTTTGATGCTGACAAGGGT
TTTTCACCTACCTCTACATCCGATCCTTTTGATTCATACTCTCTATCGGATGCCGGAACT
GTGAATTTGTTGAGTCAATCATATGGAGTATACAATATCAATGAGCTGGGATTACAAAAG
TGGCCTGTTGATGACACGGATCATGGTGAAAAGACATATAGATGTGCTTCCCATGAGATG
AGGGTCTTTGGTGCCATAGGTGCCGGTGCCAGTAGTGTTGTTCAGAGAGCAATTCATATT
CCAACTCATAGGATTATTGCTTTGAAGAAGATAAATATTTTTGAGAAGGAGAAAAGGCAG
CAACTACTTACTGAAATAAGGACATTGTGTGAGGCACCATGTTACCAAGGTCTTGTCGAG
TTCTATGGAGCTTTTTATACTCCTGATTCTGGGCAGATAAGCATAGCTCTAGAGTACATG
GATGGGGGTTCTCTTGCGGATATCATAAAAATTAGGAAGAGCATTCCAGAACCTATCCTT
TCCTCAATGGTTCAAAAGCTCTTGCATGGTCTCAGTTATTTACACGGAGTTCGACATTTA
GTCCACAGAGACATAAAGCCAGCAAATTTACTTGTCAATCTCAAGGGGGAGCCCAAAATA
ACTGATTTTGGAATTAGTGCTGGTTTAGAAAGCTCAATTGCTATGTGTGCTACTTTTGTT
GGAACAGTAACTTACATGTCGCCGGAACGAATACGGAATGAGAATTACTCTTATCCAGCT
GACATTTGGAGCCTTGGGCTTGCACTGTTTGAGTGTGGTACAGGTGAATTTCCATATACA
GCTAATGAAGGACCTGTCAATCTCATGTTGCAGATCCTAGATGATCCGTCTCCTTCACTG
TCAAGACACGACTATTCACCAGAATTCTGCTCATTCGTTGATGCTTGCCTCAAAAAAAAT
CCTGATGACAGGCCGACAGCAGATCAGCTACTGTCACATCCATTCATTATCAAGTATAGT
GATTCTGCATTAGACTTGGGTACTTTTGTCAGAGACATTTTTGATCCAACACAGAGGATG
AAGGATTTGGCAGATATGCTGACGATACATTATTATTTACTATTTGATGGATCCAATGAA
TTTTGGCAGCATACCAAGACATTATATAATGAATGCTCCACTTTCAGTTTTGGCGGGAAA
GAATCCATCGGTCCCAACAATATTTTTTCAACCTTGTCCAACATACGGAACACATTAGCT
GGAGAATGGCCTCCAGAAAAGCTTGTCCATGTTGTAGAGAAACTTCAATGTCGAGCTAAT
GGTCAGGACGGAGTAGCAATTCGTGTCTCTGGATCTTTTATAGTTGGAAATCAATTCCTC
ATTTGTGGAGATGGTATGCAAGTTGAGGGTCTGCCAAACTTGAAAGATCTCTCTATTGAT
ATACCCAGCAAACGGATGGGAACCTTTCATGAGCAGTTTATTGTAGAGAAAGCAAACATT
ATCGGTCGTTATTTCATAACTAAGCATGAACTTTTCATTACTCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400026685
PEP Infomation

pacid=37460518 transcript=PGSC0003DMT400039329 locus=PGSC0003DMG402015209 ID=PGSC0003DMT400039329.v4.03 annot-version=v4.03
Sequence

MAGLEELKKKLVPLFDADKGFSPTSTSDPFDSYSLSDAGTVNLLSQSYGVYNINELGLQK
WPVDDTDHGEKTYRCASHEMRVFGAIGAGASSVVQRAIHIPTHRIIALKKINIFEKEKRQ
QLLTEIRTLCEAPCYQGLVEFYGAFYTPDSGQISIALEYMDGGSLADIIKIRKSIPEPIL
SSMVQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLESSIAMCATFV
GTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYTANEGPVNLMLQILDDPSPSL
SRHDYSPEFCSFVDACLKKNPDDRPTADQLLSHPFIIKYSDSALDLGTFVRDIFDPTQRM
KDLADMLTIHYYLLFDGSNEFWQHTKTLYNECSTFSFGGKESIGPNNIFSTLSNIRNTLA
GEWPPEKLVHVVEKLQCRANGQDGVAIRVSGSFIVGNQFLICGDGMQVEGLPNLKDLSID
IPSKRMGTFHEQFIVEKANIIGRYFITKHELFITQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400039329
Transcript Infomation

pacid=37460518 locus=PGSC0003DMG402015209 ID=PGSC0003DMT400039329.v4.03 annot-version=v4.03
Sequence

ATGGCTGGACTGGAGGAATTGAAGAAGAAACTTGTGCCTTTGTTTGATGCTGACAAGGGT
TTTTCACCTACCTCTACATCCGATCCTTTTGATTCATACTCTCTATCGGATGCCGGAACT
GTGAATTTGTTGAGTCAATCATATGGAGTATACAATATCAATGAGCTGGGATTACAAAAG
TGGCCTGTTGATGACACGGATCATGGTGAAAAGACATATAGATGTGCTTCCCATGAGATG
AGGGTCTTTGGTGCCATAGGTGCCGGTGCCAGTAGTGTTGTTCAGAGAGCAATTCATATT
CCAACTCATAGGATTATTGCTTTGAAGAAGATAAATATTTTTGAGAAGGAGAAAAGGCAG
CAACTACTTACTGAAATAAGGACATTGTGTGAGGCACCATGTTACCAAGGTCTTGTCGAG
TTCTATGGAGCTTTTTATACTCCTGATTCTGGGCAGATAAGCATAGCTCTAGAGTACATG
GATGGGGGTTCTCTTGCGGATATCATAAAAATTAGGAAGAGCATTCCAGAACCTATCCTT
TCCTCAATGGTTCAAAAGCTCTTGCATGGTCTCAGTTATTTACACGGAGTTCGACATTTA
GTCCACAGAGACATAAAGCCAGCAAATTTACTTGTCAATCTCAAGGGGGAGCCCAAAATA
ACTGATTTTGGAATTAGTGCTGGTTTAGAAAGCTCAATTGCTATGTGTGCTACTTTTGTT
GGAACAGTAACTTACATGTCGCCGGAACGAATACGGAATGAGAATTACTCTTATCCAGCT
GACATTTGGAGCCTTGGGCTTGCACTGTTTGAGTGTGGTACAGGTGAATTTCCATATACA
GCTAATGAAGGACCTGTCAATCTCATGTTGCAGATCCTAGATGATCCGTCTCCTTCACTG
TCAAGACACGACTATTCACCAGAATTCTGCTCATTCGTTGATGCTTGCCTCAAAAAAAAT
CCTGATGACAGGCCGACAGCAGATCAGCTACTGTCACATCCATTCATTATCAAGTATAGT
GATTCTGCATTAGACTTGGGTACTTTTGTCAGAGACATTTTTGATCCAACACAGAGGATG
AAGGATTTGGCAGATATGCTGACGATACATTATTATTTACTATTTGATGGATCCAATGAA
TTTTGGCAGCATACCAAGACATTATATAATGAATGCTCCACTTTCAGTTTTGGCGGGAAA
GAATCCATCGGTCCCAACAATATTTTTTCAACCTTGTCCAACATACGGAACACATTAGCT
GGAGAATGGCCTCCAGAAAAGCTTGTCCATGTTGTAGAGAAACTTCAATGTCGAGCTAAT
GGTCAGGACGGAGTAGCAATTCGTGTCTCTGGATCTTTTATAGTTGGAAATCAATTCCTC
ATTTGTGGAGATGGTATGCAAGTTGAGGGTCTGCCAAACTTGAAAGATCTCTCTATTGAT
ATACCCAGCAAACGGATGGGAACCTTTCATGAGCAGTTTATTGTAGAGAAAGCAAACATT
ATCGGTCGTTATTTCATAACTAAGCATGAACTTTTCATTACTCAATAG