Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039290
CDS Infomation

pacid=37460920 polypeptide=PGSC0003DMP400026659 locus=PGSC0003DMG400015197 ID=PGSC0003DMT400039290.v4.03 annot-version=v4.03
Sequence

ATGGCACCTACTGTTCCAATAGATTACATTGGACAGAGAGAATCGAGGAAGTTCTTTAAA
AAGGATTCAGGTGATATGATGGGAAAATCACGCAAGGGTTTTAAAGGTTACTTGCCTGGG
ATGGTGCCCGATTATCGTAATGCTGTTGAGACAATGGCAGAATCCGAAGGTTTTGGGAGC
TCCGGACGGGTTGATACTGAAAGGACTGCATCGGAGGACTCTTGTGCACCTAAAAGAAAA
TCCATTTGTTTGAATGCTGATGGTCATGACCAATTTGGTGCACCTATTCAAGTAATGTCG
TTGTCCAATATGTCATGCTCTGAGAAAAAAGTGTTGGGAATTAGGTTGAAGAATGAACTT
GAACTAGTCAGAGGACTGCAGAAGAAAATTGCTTCTGTCGGCTCTAATATTGGGGTTCTT
TCACCTGCTAGTGATATTCAAAATTGCACCAACGGGCAGAGAAGATCAGGATCGGAGATA
TCTCAGCGATATATGGCTGAAGCAGTGGTTCCTCCTGGGAAGAAAAAGGCTGCCCCAGGG
AGAAATGGGCCTCTTACTAAGGGTCCCGGAGCTAAGCGGCCTAAGACGATGCAACAGGCC
ATACCCGCAGATACAAGCATGGTCATGTTTATGAAACAGTGCGAGACAGTGCTAAGCAGA
CTGATGTCACATCAGCATGGTTGGGTCTTCAATCATCCAGTTGATGTCGTAAAGTTAAAA
ATCCCCGACTACTTCACTGTTATTAAGCAACCAATGGACCTAGGGACCATCAGGTCAAAG
TTGCATTCGGGAGAATATTCGAGCCCTTTGCAGTTTGCTGATGATGTGCGGCTCACTTTT
AAAAATGCAATGACATACAATCCGCCAGGAAATGATGTTCATATCATGGCTCAAACACTT
CTTAAATTTTTTGAGGTTAGGTGGAAACCAATAGAAAAAAAGATACCTGTTATTCAAGAG
GAACCTTTACCTTCTAAGTCGAGTGTTATCATAGAAACTGAGACTGATACTCCTCCAGCA
ATGCCGCCTTCAAAGAAGAAGAAAATTGCTCCATTGGAGAACAGGGTTAAACCAGAACCT
GTAAAGCGAGTCATGAGTGATGTTGAAAAACATAAACTCACTGCCGAGCTTGAAGATTTA
CTGACTGAATTACCTGAAAATATAATTGATTTCTTGAAAGAAAAAAGCTCCAATGGAAGT
CAAGTCAGTGAAGATGAGATCGAGATTGATCTTGATGTTCTTCATGACGATATCTTGTAC
GAGCTACGGAAGCTTTTGGATGATTATCTACTGGAGAAACAGAAAAATCAGGCTAAAGGT
GAACCCTGTGAGATGGAGCTTCACAATGAGTCTGGATTCAGTAATTCATCCATGCAGCCA
TGCAAAGGAAATGATCCGGCAGATGAGGAAGTGGATATCGGTGGGAATGATCCACCTGTT
TCAAGCTTCCCTCCTGTGGAGATAGAGAAGGATAGAGCTCGCGGGAGCAATAAATGCAGT
AGTTCAAGTAGTTCGAGTAGTGATTCTGGCTCTTCATCTAGTGGTACAGATTCTGGAAGC
TCATCTGGTGGTGAATCGGATGCTGATAAAGATTCAGTTGCCTTAACTGTTCAGAAGGCA
ACAGCGGCTTCTGGGGCGAGATTGGAGCAGGAAGATGAGCTTGACCTTCCAGAAACTACA
GATCCGTTGGCTGGCCAAACAGTGCTGACTTCTCAGCAGAACTCCAATTTTGCTGAGCCC
GATGATCATCGAGAGGAGGAAAGTGCTGAACCTGAGAGGCAAGTCTCTCCTGAGAAGCTT
TACCGTGCAGCTTTGTTAAGAGGTCGCTTTGCGGATATCATACTAAAAGCTCAGGAGAAG
AGCATTGAAAAGGGTGAAGTGCGGGACCCAGAAAAGCTAAAGCTTGAGAGAGAGGAGTTT
GAAAGGCGAAGGCGAGAAGAGAAAGCTCGGTTGCAAGCTGAAGCTAAGGCTGCCGAAGAG
GCTCGTAAAAGAGCTGAGGCAGAAGCTGCTGCAGAAGCCAAAAGGAAACGAGAACTTGAA
AGAGAAGCTGCCCGTCAGGCACTCCAGAAGATGGAGAAGACTGTTGAAATCAATGAGAAC
AGTCAATTTATGGAAGATCTGGAATTGTTCAGAGCTGCTCCAGATGAACAGCTAGAGAGC
TTCATTGAGGAGACTAGTCCTGGTCATTCTGAGAATGTTCTTGGGAGTTTCAAATTTAAG
GCAACTAGTAATCCATTGGAGCAACTTGGATTATATATGAAGGAAGAAGACGAAGATGAA
GATGAAGAGGAGGAAGAAGAAGCTGAACCACAGAGCATCCCTGACGTATCGAATGATCCA
GAGGAAGGAGAGATTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026659
PEP Infomation

pacid=37460920 transcript=PGSC0003DMT400039290 locus=PGSC0003DMG400015197 ID=PGSC0003DMT400039290.v4.03 annot-version=v4.03
Sequence

MAPTVPIDYIGQRESRKFFKKDSGDMMGKSRKGFKGYLPGMVPDYRNAVETMAESEGFGS
SGRVDTERTASEDSCAPKRKSICLNADGHDQFGAPIQVMSLSNMSCSEKKVLGIRLKNEL
ELVRGLQKKIASVGSNIGVLSPASDIQNCTNGQRRSGSEISQRYMAEAVVPPGKKKAAPG
RNGPLTKGPGAKRPKTMQQAIPADTSMVMFMKQCETVLSRLMSHQHGWVFNHPVDVVKLK
IPDYFTVIKQPMDLGTIRSKLHSGEYSSPLQFADDVRLTFKNAMTYNPPGNDVHIMAQTL
LKFFEVRWKPIEKKIPVIQEEPLPSKSSVIIETETDTPPAMPPSKKKKIAPLENRVKPEP
VKRVMSDVEKHKLTAELEDLLTELPENIIDFLKEKSSNGSQVSEDEIEIDLDVLHDDILY
ELRKLLDDYLLEKQKNQAKGEPCEMELHNESGFSNSSMQPCKGNDPADEEVDIGGNDPPV
SSFPPVEIEKDRARGSNKCSSSSSSSSDSGSSSSGTDSGSSSGGESDADKDSVALTVQKA
TAASGARLEQEDELDLPETTDPLAGQTVLTSQQNSNFAEPDDHREEESAEPERQVSPEKL
YRAALLRGRFADIILKAQEKSIEKGEVRDPEKLKLEREEFERRRREEKARLQAEAKAAEE
ARKRAEAEAAAEAKRKRELEREAARQALQKMEKTVEINENSQFMEDLELFRAAPDEQLES
FIEETSPGHSENVLGSFKFKATSNPLEQLGLYMKEEDEDEDEEEEEEAEPQSIPDVSNDP
EEGEID*

Transcript Sequence

Transcript ID

PGSC0003DMT400039290
Transcript Infomation

pacid=37460920 locus=PGSC0003DMG400015197 ID=PGSC0003DMT400039290.v4.03 annot-version=v4.03
Sequence

ATGGCACCTACTGTTCCAATAGATTACATTGGACAGAGAGAATCGAGGAAGTTCTTTAAA
AAGGATTCAGGTGATATGATGGGAAAATCACGCAAGGGTTTTAAAGGTTACTTGCCTGGG
ATGGTGCCCGATTATCGTAATGCTGTTGAGACAATGGCAGAATCCGAAGGTTTTGGGAGC
TCCGGACGGGTTGATACTGAAAGGACTGCATCGGAGGACTCTTGTGCACCTAAAAGAAAA
TCCATTTGTTTGAATGCTGATGGTCATGACCAATTTGGTGCACCTATTCAAGTAATGTCG
TTGTCCAATATGTCATGCTCTGAGAAAAAAGTGTTGGGAATTAGGTTGAAGAATGAACTT
GAACTAGTCAGAGGACTGCAGAAGAAAATTGCTTCTGTCGGCTCTAATATTGGGGTTCTT
TCACCTGCTAGTGATATTCAAAATTGCACCAACGGGCAGAGAAGATCAGGATCGGAGATA
TCTCAGCGATATATGGCTGAAGCAGTGGTTCCTCCTGGGAAGAAAAAGGCTGCCCCAGGG
AGAAATGGGCCTCTTACTAAGGGTCCCGGAGCTAAGCGGCCTAAGACGATGCAACAGGCC
ATACCCGCAGATACAAGCATGGTCATGTTTATGAAACAGTGCGAGACAGTGCTAAGCAGA
CTGATGTCACATCAGCATGGTTGGGTCTTCAATCATCCAGTTGATGTCGTAAAGTTAAAA
ATCCCCGACTACTTCACTGTTATTAAGCAACCAATGGACCTAGGGACCATCAGGTCAAAG
TTGCATTCGGGAGAATATTCGAGCCCTTTGCAGTTTGCTGATGATGTGCGGCTCACTTTT
AAAAATGCAATGACATACAATCCGCCAGGAAATGATGTTCATATCATGGCTCAAACACTT
CTTAAATTTTTTGAGGTTAGGTGGAAACCAATAGAAAAAAAGATACCTGTTATTCAAGAG
GAACCTTTACCTTCTAAGTCGAGTGTTATCATAGAAACTGAGACTGATACTCCTCCAGCA
ATGCCGCCTTCAAAGAAGAAGAAAATTGCTCCATTGGAGAACAGGGTTAAACCAGAACCT
GTAAAGCGAGTCATGAGTGATGTTGAAAAACATAAACTCACTGCCGAGCTTGAAGATTTA
CTGACTGAATTACCTGAAAATATAATTGATTTCTTGAAAGAAAAAAGCTCCAATGGAAGT
CAAGTCAGTGAAGATGAGATCGAGATTGATCTTGATGTTCTTCATGACGATATCTTGTAC
GAGCTACGGAAGCTTTTGGATGATTATCTACTGGAGAAACAGAAAAATCAGGCTAAAGGT
GAACCCTGTGAGATGGAGCTTCACAATGAGTCTGGATTCAGTAATTCATCCATGCAGCCA
TGCAAAGGAAATGATCCGGCAGATGAGGAAGTGGATATCGGTGGGAATGATCCACCTGTT
TCAAGCTTCCCTCCTGTGGAGATAGAGAAGGATAGAGCTCGCGGGAGCAATAAATGCAGT
AGTTCAAGTAGTTCGAGTAGTGATTCTGGCTCTTCATCTAGTGGTACAGATTCTGGAAGC
TCATCTGGTGGTGAATCGGATGCTGATAAAGATTCAGTTGCCTTAACTGTTCAGAAGGCA
ACAGCGGCTTCTGGGGCGAGATTGGAGCAGGAAGATGAGCTTGACCTTCCAGAAACTACA
GATCCGTTGGCTGGCCAAACAGTGCTGACTTCTCAGCAGAACTCCAATTTTGCTGAGCCC
GATGATCATCGAGAGGAGGAAAGTGCTGAACCTGAGAGGCAAGTCTCTCCTGAGAAGCTT
TACCGTGCAGCTTTGTTAAGAGGTCGCTTTGCGGATATCATACTAAAAGCTCAGGAGAAG
AGCATTGAAAAGGGTGAAGTGCGGGACCCAGAAAAGCTAAAGCTTGAGAGAGAGGAGTTT
GAAAGGCGAAGGCGAGAAGAGAAAGCTCGGTTGCAAGCTGAAGCTAAGGCTGCCGAAGAG
GCTCGTAAAAGAGCTGAGGCAGAAGCTGCTGCAGAAGCCAAAAGGAAACGAGAACTTGAA
AGAGAAGCTGCCCGTCAGGCACTCCAGAAGATGGAGAAGACTGTTGAAATCAATGAGAAC
AGTCAATTTATGGAAGATCTGGAATTGTTCAGAGCTGCTCCAGATGAACAGCTAGAGAGC
TTCATTGAGGAGACTAGTCCTGGTCATTCTGAGAATGTTCTTGGGAGTTTCAAATTTAAG
GCAACTAGTAATCCATTGGAGCAACTTGGATTATATATGAAGGAAGAAGACGAAGATGAA
GATGAAGAGGAGGAAGAAGAAGCTGAACCACAGAGCATCCCTGACGTATCGAATGATCCA
GAGGAAGGAGAGATTGATTGA