Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039283
CDS Infomation

pacid=37461161 polypeptide=PGSC0003DMP400026653 locus=PGSC0003DMG400015192 ID=PGSC0003DMT400039283.v4.03 annot-version=v4.03
Sequence

ATGGTTAGCTTTGAGACATTTCTTCCAACTAATAACCCTGTTCAAAGAAAGAACAGTGGA
ACAATGGGTTATGATGTACCTGAAGGAGTAGACATTAGGGGAAGATATGATCCTGAATTT
TCCAAGATTTTAACTAGGGATGCTTTGCAATTTGTAACTGATTTGCAGAGGGAATTCAGG
AACCATATTAAGTATGCTATGGAGGGCAGGAGAGAGGCCAAACTGAGGTATAATAATGGA
GGTTTGCCGGGTTTTGATCCGGCAACCAAATATATTAGGGAAGGAGAATGGGTGTGTGCT
CCTGTGCCAGCGGCAGTGGCTGATCGGAGGGTGGAGATTACTGGACCAGTTGAGAGGAAG
ATGGTCATCAATGCCCTCAATTCTGGTGCCAAAGTTTTCATGGCTGACTTTGAAGATGCA
CTGTCACCAAGCTGGGAGAATTTAATGAGAGGCCATGTAAATTTGAGGGATGCAGTGAAT
AGAACAATAACATTCCATGATCAAGCCAGAAACAAAGTGTATAAACTGAATGATCAGACA
GCCAAGTTGTTTGTGCGCCCAAGAGGGTGGCATTTGCCAGAAGCTCACATCTTCATTGAT
GGTGAGCCTGCAACAGGTTGCCTTGTCGACTTCGGCCTCTACTTCTTCCACAGCTATGCC
AACTTCCGCAAGGCCCAAGGACAAGGATTTGGACCCTTTTTCTATCTTCCCAAGATGGAA
CATTCTAGGGAAGCTAGGATATGGAACAATGTGTTTGACAGGGCAGAGAAATGGGCTGGA
ATTGAGAAGGGAAGCATTAGGGCCACTGTCTTGATTGAAACACTTCCAGCAGTGTTTCAG
ATGAATGAAATCTTGTATGAACTGAGGGACCATTCAGTTGGCCTCAACTGTGGTAGATGG
GATTACATTTTCAGCTACGTCAAGACTTTCCAGGGTCATCCCGATCGATTACTCCCTGAT
AGGGTTCAAGTTGGCATGGCTCAACACTTTATGAGGAGTTACTCTGACTTGCTCATCCAT
ACCTGTCATAAGCGCGATGTCCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATCAGA
GATGATCCAGCAGCTAACGAGGCAGCATTGGAACTAGTAAGGAAGGATAAGCTGAGAGAA
GTGAAGGCAGGGCATGATGGAACATGGGCAGCTCACCCTGGCTTAATTCCAGCCTGCATG
GAAGTCTTCACCAACAACATGACAAATGCTCCTAACCAAATCCATTCCATGAAGCGCCAA
GATGCATCGGTCCTAATTGAAGAAGACCTACTGCAGAGTCCAAGAGGAGTCCGAACCATG
GAGGGCCTCAGGCTGAACACCCGAGTGGGAATTCAGTACTTGGCTGCTTGGCTGACAGGG
GCTGGTTCTGTTCCACTCTACAACCTCATGGAGGATGCTGCCACAGCTGAGATTAGCCGA
GTCCAGAACTGGCAATGGCTGAAATATGGAGTGGAATTGGATGGAGATGGACTTGGGGTG
AAAGTGAACTTAGACCTGTTTGGAAGAGTGGTTGAAGAAGAAATGGCTAGGATTGAGAGA
GAAGTTGGAAAGGAGAAATTCAAGAAGGGAATGTATAAGGAGGCCTGCAAACTATTCACA
AGGCAATGCACTACACCAATCTTGGATGATTTTCTGACTCTTGATGCCTATAATAACATT
GTCATGTATCATCCTATTAGATCGTCCCGGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026653
PEP Infomation

pacid=37461161 transcript=PGSC0003DMT400039283 locus=PGSC0003DMG400015192 ID=PGSC0003DMT400039283.v4.03 annot-version=v4.03
Sequence

MVSFETFLPTNNPVQRKNSGTMGYDVPEGVDIRGRYDPEFSKILTRDALQFVTDLQREFR
NHIKYAMEGRREAKLRYNNGGLPGFDPATKYIREGEWVCAPVPAAVADRRVEITGPVERK
MVINALNSGAKVFMADFEDALSPSWENLMRGHVNLRDAVNRTITFHDQARNKVYKLNDQT
AKLFVRPRGWHLPEAHIFIDGEPATGCLVDFGLYFFHSYANFRKAQGQGFGPFFYLPKME
HSREARIWNNVFDRAEKWAGIEKGSIRATVLIETLPAVFQMNEILYELRDHSVGLNCGRW
DYIFSYVKTFQGHPDRLLPDRVQVGMAQHFMRSYSDLLIHTCHKRDVHAMGGMAAQIPIR
DDPAANEAALELVRKDKLREVKAGHDGTWAAHPGLIPACMEVFTNNMTNAPNQIHSMKRQ
DASVLIEEDLLQSPRGVRTMEGLRLNTRVGIQYLAAWLTGAGSVPLYNLMEDAATAEISR
VQNWQWLKYGVELDGDGLGVKVNLDLFGRVVEEEMARIEREVGKEKFKKGMYKEACKLFT
RQCTTPILDDFLTLDAYNNIVMYHPIRSSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400039283
Transcript Infomation

pacid=37461161 locus=PGSC0003DMG400015192 ID=PGSC0003DMT400039283.v4.03 annot-version=v4.03
Sequence

ATGGTTAGCTTTGAGACATTTCTTCCAACTAATAACCCTGTTCAAAGAAAGAACAGTGGA
ACAATGGGTTATGATGTACCTGAAGGAGTAGACATTAGGGGAAGATATGATCCTGAATTT
TCCAAGATTTTAACTAGGGATGCTTTGCAATTTGTAACTGATTTGCAGAGGGAATTCAGG
AACCATATTAAGTATGCTATGGAGGGCAGGAGAGAGGCCAAACTGAGGTATAATAATGGA
GGTTTGCCGGGTTTTGATCCGGCAACCAAATATATTAGGGAAGGAGAATGGGTGTGTGCT
CCTGTGCCAGCGGCAGTGGCTGATCGGAGGGTGGAGATTACTGGACCAGTTGAGAGGAAG
ATGGTCATCAATGCCCTCAATTCTGGTGCCAAAGTTTTCATGGCTGACTTTGAAGATGCA
CTGTCACCAAGCTGGGAGAATTTAATGAGAGGCCATGTAAATTTGAGGGATGCAGTGAAT
AGAACAATAACATTCCATGATCAAGCCAGAAACAAAGTGTATAAACTGAATGATCAGACA
GCCAAGTTGTTTGTGCGCCCAAGAGGGTGGCATTTGCCAGAAGCTCACATCTTCATTGAT
GGTGAGCCTGCAACAGGTTGCCTTGTCGACTTCGGCCTCTACTTCTTCCACAGCTATGCC
AACTTCCGCAAGGCCCAAGGACAAGGATTTGGACCCTTTTTCTATCTTCCCAAGATGGAA
CATTCTAGGGAAGCTAGGATATGGAACAATGTGTTTGACAGGGCAGAGAAATGGGCTGGA
ATTGAGAAGGGAAGCATTAGGGCCACTGTCTTGATTGAAACACTTCCAGCAGTGTTTCAG
ATGAATGAAATCTTGTATGAACTGAGGGACCATTCAGTTGGCCTCAACTGTGGTAGATGG
GATTACATTTTCAGCTACGTCAAGACTTTCCAGGGTCATCCCGATCGATTACTCCCTGAT
AGGGTTCAAGTTGGCATGGCTCAACACTTTATGAGGAGTTACTCTGACTTGCTCATCCAT
ACCTGTCATAAGCGCGATGTCCATGCTATGGGAGGCATGGCAGCTCAAATTCCAATCAGA
GATGATCCAGCAGCTAACGAGGCAGCATTGGAACTAGTAAGGAAGGATAAGCTGAGAGAA
GTGAAGGCAGGGCATGATGGAACATGGGCAGCTCACCCTGGCTTAATTCCAGCCTGCATG
GAAGTCTTCACCAACAACATGACAAATGCTCCTAACCAAATCCATTCCATGAAGCGCCAA
GATGCATCGGTCCTAATTGAAGAAGACCTACTGCAGAGTCCAAGAGGAGTCCGAACCATG
GAGGGCCTCAGGCTGAACACCCGAGTGGGAATTCAGTACTTGGCTGCTTGGCTGACAGGG
GCTGGTTCTGTTCCACTCTACAACCTCATGGAGGATGCTGCCACAGCTGAGATTAGCCGA
GTCCAGAACTGGCAATGGCTGAAATATGGAGTGGAATTGGATGGAGATGGACTTGGGGTG
AAAGTGAACTTAGACCTGTTTGGAAGAGTGGTTGAAGAAGAAATGGCTAGGATTGAGAGA
GAAGTTGGAAAGGAGAAATTCAAGAAGGGAATGTATAAGGAGGCCTGCAAACTATTCACA
AGGCAATGCACTACACCAATCTTGGATGATTTTCTGACTCTTGATGCCTATAATAACATT
GTCATGTATCATCCTATTAGATCGTCCCGGCTCTAA