Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039281
CDS Infomation

pacid=37463460 polypeptide=PGSC0003DMP400026651 locus=PGSC0003DMG400015190 ID=PGSC0003DMT400039281.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAAAAATGGCTATTGCCCAGATACCAAAATTTTCAAGAGCTTAAGACCATCT
GTTCCATTGCCGCCATTAACGGAGCCTCTTTCTATCGTCCAATACGCCCTCTCTCTCCTC
AACTCTCCGACCACCGGAATCAATCTTAGTGCCACTACTTTCCTCGTTGACGCCGACACC
GGCCACCGCTTATCTTACGCCGATTTCCTTAGCCAGACTCAAAATCTCGCTTCTTCTATC
CAAGCTCGTTACCCTTCACTTTCTCAAAACGATGTCGCTTTTGTTCTCTCTCCTACTTCA
ATTCATGTTCCAATTGTATTCTTCGCACTCCTCTCTCTAGGCGTTGTCGTTTCTCCGGCT
AATCCGCTCTCTTCTTCTTCCGAGTTAACTCATATGGTTCAGCTATGTAAACCCCTCATT
GCTTTTGCTACTTCCTCTACTGTTGGTAAACTTCCTTCTTCGCTATTTCCTCTCGGTACC
ATTCTACTCGATTCGCCTGAATTTCGGAAAATGATTCAAATCCCTGTTTCTAATCCCATC
TCTTACCCACTCATTCACCAGTCCGATTCGGCAGCGATTCTCTACTCGTCTGGAACTACG
GGGAAAGTAAAAGGCGTAGAATTAACTCACCGGAATTTAATCGCGTTAATCGCTAGTTTG
TTCCATAGCAGATTCAATGATAATGCCGCTGATGAAGGTGAAATCACGGAGCAAGCGGTC
GCTTTTATGACGTTGCCGTTGTTTCACGTGTTTGGATTTTTTATGCTGATTAGGCTAGCG
AGTATGGGTGAAACGATGGTGATGACGGGGAGATTTGATTTCGAGAAGATGTTAGCAGCG
GTGGAGAAGTACAGAGTTACGTACATGCCGGTGTCGCCGCCGCTAGTGGTGGCAATGGCG
AAGTCGGATTTGGCATTGAAGTATGATCTCAGCTCACTGCAACTGCTAGCCTGCGGCGGA
GCGCCGCTAGGGAAGGAGGTGGCAGAGCGGTTCAAGAGCAGGTTTCCTGACGTGGAGATT
TTGCAGGGATATGGTCTGACTGAGACTACTGGAGGAGCAACAGGGATGAATGGCCCTGAG
GAATCAAACCAGTATGGATCTGCTGGTCGCCTTGGTGTGAATGTGGAAGCTAAGATTGTT
GATCCTGAAAGTGGAAAGTCCTTGCCTCCTGGACAGCGTGGAGAGCTCTGGTTACGTGCT
CCAACAATCATGAAAGGCTATGTTGGAGATAAACAAGCTACCTCAGCAACACTTGATCCA
GAAGGTTGGCTGAAAACTGGTGATCTCTGCTATTTTGATGCGGATGGGTTTCTATATGTT
GTCGATAGGTTAAAAGAACTGATAAAGTACAAGGCATATCAGGTCCCCCCTGCCGAACTT
GAACATTTACTTCAGTCAATTCCTGATGTTGCTGATGCAGCAGTTATTCCATATCCCGAT
GAAGAAGCAGGGGAGATTCCTATGGCTTACATAGTCAGAAGACCTGGGAGCACTATTAGT
GAGTCACAAATTATAGATATCATTGCAAAACAGGTCTCACCATACAAAAAGATACGTCGC
GTTGCATTCATCAACGCAATACCAAAATCTCCAGCTGGAAAGATCTTGAGAAGAGAACTC
GTTAATCATGCGACGAATGGTGCTTCTGCAAGATTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400026651
PEP Infomation

pacid=37463460 transcript=PGSC0003DMT400039281 locus=PGSC0003DMG400015190 ID=PGSC0003DMT400039281.v4.03 annot-version=v4.03
Sequence

MDPKNGYCPDTKIFKSLRPSVPLPPLTEPLSIVQYALSLLNSPTTGINLSATTFLVDADT
GHRLSYADFLSQTQNLASSIQARYPSLSQNDVAFVLSPTSIHVPIVFFALLSLGVVVSPA
NPLSSSSELTHMVQLCKPLIAFATSSTVGKLPSSLFPLGTILLDSPEFRKMIQIPVSNPI
SYPLIHQSDSAAILYSSGTTGKVKGVELTHRNLIALIASLFHSRFNDNAADEGEITEQAV
AFMTLPLFHVFGFFMLIRLASMGETMVMTGRFDFEKMLAAVEKYRVTYMPVSPPLVVAMA
KSDLALKYDLSSLQLLACGGAPLGKEVAERFKSRFPDVEILQGYGLTETTGGATGMNGPE
ESNQYGSAGRLGVNVEAKIVDPESGKSLPPGQRGELWLRAPTIMKGYVGDKQATSATLDP
EGWLKTGDLCYFDADGFLYVVDRLKELIKYKAYQVPPAELEHLLQSIPDVADAAVIPYPD
EEAGEIPMAYIVRRPGSTISESQIIDIIAKQVSPYKKIRRVAFINAIPKSPAGKILRREL
VNHATNGASARL*

Transcript Sequence

Transcript ID

PGSC0003DMT400039281
Transcript Infomation

pacid=37463460 locus=PGSC0003DMG400015190 ID=PGSC0003DMT400039281.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAAAAATGGCTATTGCCCAGATACCAAAATTTTCAAGAGCTTAAGACCATCT
GTTCCATTGCCGCCATTAACGGAGCCTCTTTCTATCGTCCAATACGCCCTCTCTCTCCTC
AACTCTCCGACCACCGGAATCAATCTTAGTGCCACTACTTTCCTCGTTGACGCCGACACC
GGCCACCGCTTATCTTACGCCGATTTCCTTAGCCAGACTCAAAATCTCGCTTCTTCTATC
CAAGCTCGTTACCCTTCACTTTCTCAAAACGATGTCGCTTTTGTTCTCTCTCCTACTTCA
ATTCATGTTCCAATTGTATTCTTCGCACTCCTCTCTCTAGGCGTTGTCGTTTCTCCGGCT
AATCCGCTCTCTTCTTCTTCCGAGTTAACTCATATGGTTCAGCTATGTAAACCCCTCATT
GCTTTTGCTACTTCCTCTACTGTTGGTAAACTTCCTTCTTCGCTATTTCCTCTCGGTACC
ATTCTACTCGATTCGCCTGAATTTCGGAAAATGATTCAAATCCCTGTTTCTAATCCCATC
TCTTACCCACTCATTCACCAGTCCGATTCGGCAGCGATTCTCTACTCGTCTGGAACTACG
GGGAAAGTAAAAGGCGTAGAATTAACTCACCGGAATTTAATCGCGTTAATCGCTAGTTTG
TTCCATAGCAGATTCAATGATAATGCCGCTGATGAAGGTGAAATCACGGAGCAAGCGGTC
GCTTTTATGACGTTGCCGTTGTTTCACGTGTTTGGATTTTTTATGCTGATTAGGCTAGCG
AGTATGGGTGAAACGATGGTGATGACGGGGAGATTTGATTTCGAGAAGATGTTAGCAGCG
GTGGAGAAGTACAGAGTTACGTACATGCCGGTGTCGCCGCCGCTAGTGGTGGCAATGGCG
AAGTCGGATTTGGCATTGAAGTATGATCTCAGCTCACTGCAACTGCTAGCCTGCGGCGGA
GCGCCGCTAGGGAAGGAGGTGGCAGAGCGGTTCAAGAGCAGGTTTCCTGACGTGGAGATT
TTGCAGGGATATGGTCTGACTGAGACTACTGGAGGAGCAACAGGGATGAATGGCCCTGAG
GAATCAAACCAGTATGGATCTGCTGGTCGCCTTGGTGTGAATGTGGAAGCTAAGATTGTT
GATCCTGAAAGTGGAAAGTCCTTGCCTCCTGGACAGCGTGGAGAGCTCTGGTTACGTGCT
CCAACAATCATGAAAGGCTATGTTGGAGATAAACAAGCTACCTCAGCAACACTTGATCCA
GAAGGTTGGCTGAAAACTGGTGATCTCTGCTATTTTGATGCGGATGGGTTTCTATATGTT
GTCGATAGGTTAAAAGAACTGATAAAGTACAAGGCATATCAGGTCCCCCCTGCCGAACTT
GAACATTTACTTCAGTCAATTCCTGATGTTGCTGATGCAGCAGTTATTCCATATCCCGAT
GAAGAAGCAGGGGAGATTCCTATGGCTTACATAGTCAGAAGACCTGGGAGCACTATTAGT
GAGTCACAAATTATAGATATCATTGCAAAACAGGTCTCACCATACAAAAAGATACGTCGC
GTTGCATTCATCAACGCAATACCAAAATCTCCAGCTGGAAAGATCTTGAGAAGAGAACTC
GTTAATCATGCGACGAATGGTGCTTCTGCAAGATTATGA