Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039244
CDS Infomation

pacid=37458835 polypeptide=PGSC0003DMP400026623 locus=PGSC0003DMG400015173 ID=PGSC0003DMT400039244.v4.03 annot-version=v4.03
Sequence

ATGACATTGATTCTGATCATTTGCTTGCTTGTTCTGTCAATAATCCTTGTGGGCGTCAAA
CCTGCAGAGATCACTTACATGACAAGCAATTGTCCAAATACCGCTAGTGATTATACAGAA
GGAAGCAAATTTCAGTTCAATCTTAACCGCTTATTGTACAGATTATTGTACAATAATGCT
AGCAATTCCATCTATGCAAAACCCAGTGTAGGTGAAAACGATGACGATAAAGTTCATGGA
TTGTATCTCTGTAGAGGAGACGTTGCACCTAAAGACTGCCAAAACTGCATAGATGTGGCA
AGTGAGCGGATCCAGCGTGAATGTCCGCTTAAGAAACAAGCAACTATATTGTATGATCAG
TGTTTGATACGCTATTCTAGTATACCTAATTTTGCGTCCACGTTTAATGTCTCGTCTTAT
TATTGGATCGTTTACAACACAGAAAGCTTTTCATGGATGAACCAAGTTAAAGGGATTTCA
GATGCAATGTTTGATAATCTCACCCCTAAAGCTACAAATGATCTCAAATATGCTGAAAGT
TTTGATGAAATTACACCGTTGTCGTTATCTCAGAAGTTGTATGGCATGGTGCAGTGTATA
CCAGATTTGTCAGCGGAAGATTGCCGTGCTTGCCTGAAGGGTGCGCGGTCTGTAATCCCT
AAATCTGTACCACGTGAATGTAGAGTTGTACATGAAAGCTGTCATTTAAGCTATCAATTC
AAAAATCCTGAGGAAGGGAGAACGGGAGCACCACCACCGCCATCACCCACACTGGGACCG
CCATCAACCGCACCAGGGGACAAAGACCAAGGGGAAATTACTTGGAGGACCAAGGTTATT
TGTATCGTCACAGGTGTTATAGCACTGCTGGCCGTTGTATTGACAGGATCTTGCCTTTAC
CTTAAGAAAAGAAGTAGAAGAAGAGCTGAGAGAGAGAGGAGGGAAAGGAGACGACTACTT
CAATTGCTTGACATGGAAGGAAACTTACTTGGTGAATTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026623
PEP Infomation

pacid=37458835 transcript=PGSC0003DMT400039244 locus=PGSC0003DMG400015173 ID=PGSC0003DMT400039244.v4.03 annot-version=v4.03
Sequence

MTLILIICLLVLSIILVGVKPAEITYMTSNCPNTASDYTEGSKFQFNLNRLLYRLLYNNA
SNSIYAKPSVGENDDDKVHGLYLCRGDVAPKDCQNCIDVASERIQRECPLKKQATILYDQ
CLIRYSSIPNFASTFNVSSYYWIVYNTESFSWMNQVKGISDAMFDNLTPKATNDLKYAES
FDEITPLSLSQKLYGMVQCIPDLSAEDCRACLKGARSVIPKSVPRECRVVHESCHLSYQF
KNPEEGRTGAPPPPSPTLGPPSTAPGDKDQGEITWRTKVICIVTGVIALLAVVLTGSCLY
LKKRSRRRAERERRERRRLLQLLDMEGNLLGEF*

Transcript Sequence

Transcript ID

PGSC0003DMT400039244
Transcript Infomation

pacid=37458835 locus=PGSC0003DMG400015173 ID=PGSC0003DMT400039244.v4.03 annot-version=v4.03
Sequence

ATGACATTGATTCTGATCATTTGCTTGCTTGTTCTGTCAATAATCCTTGTGGGCGTCAAA
CCTGCAGAGATCACTTACATGACAAGCAATTGTCCAAATACCGCTAGTGATTATACAGAA
GGAAGCAAATTTCAGTTCAATCTTAACCGCTTATTGTACAGATTATTGTACAATAATGCT
AGCAATTCCATCTATGCAAAACCCAGTGTAGGTGAAAACGATGACGATAAAGTTCATGGA
TTGTATCTCTGTAGAGGAGACGTTGCACCTAAAGACTGCCAAAACTGCATAGATGTGGCA
AGTGAGCGGATCCAGCGTGAATGTCCGCTTAAGAAACAAGCAACTATATTGTATGATCAG
TGTTTGATACGCTATTCTAGTATACCTAATTTTGCGTCCACGTTTAATGTCTCGTCTTAT
TATTGGATCGTTTACAACACAGAAAGCTTTTCATGGATGAACCAAGTTAAAGGGATTTCA
GATGCAATGTTTGATAATCTCACCCCTAAAGCTACAAATGATCTCAAATATGCTGAAAGT
TTTGATGAAATTACACCGTTGTCGTTATCTCAGAAGTTGTATGGCATGGTGCAGTGTATA
CCAGATTTGTCAGCGGAAGATTGCCGTGCTTGCCTGAAGGGTGCGCGGTCTGTAATCCCT
AAATCTGTACCACGTGAATGTAGAGTTGTACATGAAAGCTGTCATTTAAGCTATCAATTC
AAAAATCCTGAGGAAGGGAGAACGGGAGCACCACCACCGCCATCACCCACACTGGGACCG
CCATCAACCGCACCAGGGGACAAAGACCAAGGGGAAATTACTTGGAGGACCAAGGTTATT
TGTATCGTCACAGGTGTTATAGCACTGCTGGCCGTTGTATTGACAGGATCTTGCCTTTAC
CTTAAGAAAAGAAGTAGAAGAAGAGCTGAGAGAGAGAGGAGGGAAAGGAGACGACTACTT
CAATTGCTTGACATGGAAGGAAACTTACTTGGTGAATTTTAA