Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039229
CDS Infomation

pacid=37458841 polypeptide=PGSC0003DMP400026613 locus=PGSC0003DMG400015168 ID=PGSC0003DMT400039229.v4.03 annot-version=v4.03
Sequence

ATGGAAGCAATTGAACAACACCAAAATCAAAATCAAAATCAAAATCAAAATCACAATCAA
TCATCAGATCAAACTGAAGAATTAGGGATTGAGTCTCAGAATTCCGAAACATTGTTGTTA
CCGTCCGATCTCAATTTCCAAAACCCTAATCAAAATCAGCCAAAAGCTGATGAGAGTGAC
GATGATGATGAGATGGCGATGCAAGCCATCTGCGAAGAGCTTAAAAATCTGGTCTTGAGC
CAGGTTCTGGATGAGGATGGAGGAAACCAAGATCTTCACCACCTTGATCGTGAAGAAAGT
GGAGAACTCAAGGAAAAATTGGAAGATGAGCTTGAAAATGTTGAAGGGAATGATGATGGA
TGGGGATATGTCGGTGAATATGGTTATGATCAGTATGACGAGGATGGTGATGAAAACAGG
AGTGGAAGTCGGAATGGCAATGAGATTGATGGGGAAAACGAAAATGGTTATGAAGGGGAT
TCTAAGGAAGCAGGGTTTAATGCTAATAGGATAAATAAGAGGAAGATTAATTATCCTTTA
AGACCTGATGCTCAGGATTGTCCTTATTATATGAAAACAGGGATGTGTAAATTTGGATCG
AATTGCAAGTTTAATCACCCTTCCAGAAGAAGAATCCAGCAGGGGACAAAGGATAAGGGG
AAGCAAAGGGAAGACAGCCAGGAGAGGCCGGGGCAGATTGAATGCAAGTATTACCTTACA
TCAGGGGGTTGCAAGTATGGAAAAGCTTGTAAATTTAATCATAGTAGGGAAAAGGGTGCC
ATCTCACCAATTGTGGAGTTCAACTTTCTTGGCCTGCCCATTCGACTGGGGGAAAAGGAG
TGCCCTTACTATATGCGTACTGGCTCTTGCAAGTATGGGTCCAACTGTAGGTTTCATCAT
CCTGATCCTACCACTGTGGCTGGAGCTGATCTATCTTCTGGACATAACAACACTGGAGCT
GTTCCTGTACAAGCTGCCTCCCATTCATCTGCATCTTCTTGGTCTCCGCCAAGATCATTG
AATGATACAGCTCCTTATGTACCAATGATGTACCCACCAACCCAAGGCACTGCTTCTCCA
AATACTGAATGGAATGGGTATCAGGCCCCGGCCTATCCAACATCAGAGAAAAGACTACCT
ACTCCTCCAGCATTTGCTATGAACAACCCGGCGAAGACCAATTTCTATCCACGGTCTCAA
CAGCCAGAGCAGGTTGAAGAATATCCTGAACGTCCTGGTCAACTTGAATGCAGTTACTTC
ATTAAATTTGGAGACTGTAAATACAGATCTAACTGCAAATTTCATCATCCAAAGTCTAGA
ATATCAAAAGCAAACTCAAGTACTCTCAATGACAAGGGACTGCCGCTAAGACCTGATCAA
ACTGTCTGCTCATTCTACAGCCGCTATGGAATATGCAAGTATGGCCCTGCTTGTAAGTTT
GATCATCCAGAAAATTATGTTGGATCTGCATCACCTGCCGAGTCTGGCTTTGATCAGCAT
CAGCAATCACAGATGTCTCAAGGATGGCAAGGACAGCACCTGGAAGTGGATCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026613
PEP Infomation

pacid=37458841 transcript=PGSC0003DMT400039229 locus=PGSC0003DMG400015168 ID=PGSC0003DMT400039229.v4.03 annot-version=v4.03
Sequence

MEAIEQHQNQNQNQNQNHNQSSDQTEELGIESQNSETLLLPSDLNFQNPNQNQPKADESD
DDDEMAMQAICEELKNLVLSQVLDEDGGNQDLHHLDREESGELKEKLEDELENVEGNDDG
WGYVGEYGYDQYDEDGDENRSGSRNGNEIDGENENGYEGDSKEAGFNANRINKRKINYPL
RPDAQDCPYYMKTGMCKFGSNCKFNHPSRRRIQQGTKDKGKQREDSQERPGQIECKYYLT
SGGCKYGKACKFNHSREKGAISPIVEFNFLGLPIRLGEKECPYYMRTGSCKYGSNCRFHH
PDPTTVAGADLSSGHNNTGAVPVQAASHSSASSWSPPRSLNDTAPYVPMMYPPTQGTASP
NTEWNGYQAPAYPTSEKRLPTPPAFAMNNPAKTNFYPRSQQPEQVEEYPERPGQLECSYF
IKFGDCKYRSNCKFHHPKSRISKANSSTLNDKGLPLRPDQTVCSFYSRYGICKYGPACKF
DHPENYVGSASPAESGFDQHQQSQMSQGWQGQHLEVDH*

Transcript Sequence

Transcript ID

PGSC0003DMT400039229
Transcript Infomation

pacid=37458841 locus=PGSC0003DMG400015168 ID=PGSC0003DMT400039229.v4.03 annot-version=v4.03
Sequence

ATGGAAGCAATTGAACAACACCAAAATCAAAATCAAAATCAAAATCAAAATCACAATCAA
TCATCAGATCAAACTGAAGAATTAGGGATTGAGTCTCAGAATTCCGAAACATTGTTGTTA
CCGTCCGATCTCAATTTCCAAAACCCTAATCAAAATCAGCCAAAAGCTGATGAGAGTGAC
GATGATGATGAGATGGCGATGCAAGCCATCTGCGAAGAGCTTAAAAATCTGGTCTTGAGC
CAGGTTCTGGATGAGGATGGAGGAAACCAAGATCTTCACCACCTTGATCGTGAAGAAAGT
GGAGAACTCAAGGAAAAATTGGAAGATGAGCTTGAAAATGTTGAAGGGAATGATGATGGA
TGGGGATATGTCGGTGAATATGGTTATGATCAGTATGACGAGGATGGTGATGAAAACAGG
AGTGGAAGTCGGAATGGCAATGAGATTGATGGGGAAAACGAAAATGGTTATGAAGGGGAT
TCTAAGGAAGCAGGGTTTAATGCTAATAGGATAAATAAGAGGAAGATTAATTATCCTTTA
AGACCTGATGCTCAGGATTGTCCTTATTATATGAAAACAGGGATGTGTAAATTTGGATCG
AATTGCAAGTTTAATCACCCTTCCAGAAGAAGAATCCAGCAGGGGACAAAGGATAAGGGG
AAGCAAAGGGAAGACAGCCAGGAGAGGCCGGGGCAGATTGAATGCAAGTATTACCTTACA
TCAGGGGGTTGCAAGTATGGAAAAGCTTGTAAATTTAATCATAGTAGGGAAAAGGGTGCC
ATCTCACCAATTGTGGAGTTCAACTTTCTTGGCCTGCCCATTCGACTGGGGGAAAAGGAG
TGCCCTTACTATATGCGTACTGGCTCTTGCAAGTATGGGTCCAACTGTAGGTTTCATCAT
CCTGATCCTACCACTGTGGCTGGAGCTGATCTATCTTCTGGACATAACAACACTGGAGCT
GTTCCTGTACAAGCTGCCTCCCATTCATCTGCATCTTCTTGGTCTCCGCCAAGATCATTG
AATGATACAGCTCCTTATGTACCAATGATGTACCCACCAACCCAAGGCACTGCTTCTCCA
AATACTGAATGGAATGGGTATCAGGCCCCGGCCTATCCAACATCAGAGAAAAGACTACCT
ACTCCTCCAGCATTTGCTATGAACAACCCGGCGAAGACCAATTTCTATCCACGGTCTCAA
CAGCCAGAGCAGGTTGAAGAATATCCTGAACGTCCTGGTCAACTTGAATGCAGTTACTTC
ATTAAATTTGGAGACTGTAAATACAGATCTAACTGCAAATTTCATCATCCAAAGTCTAGA
ATATCAAAAGCAAACTCAAGTACTCTCAATGACAAGGGACTGCCGCTAAGACCTGATCAA
ACTGTCTGCTCATTCTACAGCCGCTATGGAATATGCAAGTATGGCCCTGCTTGTAAGTTT
GATCATCCAGAAAATTATGTTGGATCTGCATCACCTGCCGAGTCTGGCTTTGATCAGCAT
CAGCAATCACAGATGTCTCAAGGATGGCAAGGACAGCACCTGGAAGTGGATCACTGA