Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039226
CDS Infomation

pacid=37460330 polypeptide=PGSC0003DMP400026610 locus=PGSC0003DMG400015167 ID=PGSC0003DMT400039226.v4.03 annot-version=v4.03
Sequence

ATGGTTAAGCTTTATGTGTTGATTGCAGGACGGTTTGTTAAAAGGGCTCCTGCCTTGATT
GATGTCCCAGTAGAGTCATCTGATCGAATTCAGAAATTGAATAATGGAAGTGTAGAAGGG
TTTTCAAGGACCAAAGCACACAAAGAAACTTCTTCCCTCGGCCTGTTGGCTTTAGCTTAT
GCCAATTCGTCAGATTCTGATGAAGACGAGGTTGAAGCAGATATTCCTGTTGAAGCTTGT
GAAAGCAGACATACAGATTCTGAGGATGAGGTTTTTCTCCGAGTTATTGATCCTTACGGA
AACCACAGACAAAAGAGAGCTGTATCTCAAGGTAGAAACTGTCAAAAAACTGACAATTCC
GTTCAGTTGGAGAATGAAAGTTACCCATCAGGGGAATCAAATACTCTGTTAGGTAGGTCA
AGCCATCAACCAAGATCCCATCAAGTCGCTGCAAAGTGTATTTCCAATATAGGAGAAATA
GTACAAAACAATGCTGTTGCTCCATTTGATCATGCACGTATGCAATTTACTTCAACATCT
GATGAAGACTCTTTCAGAATACATGTATTCTGTCTCCAGCATGCTGTACAAGTAGAAGAA
CAGCTCCGTCGAATTGGTGGAGCACGTATTTCTCTTCTTTGTCATCCAGACTATCCCAAG
CTAGAAGCTCAAGCTAAACAAGTGGCTGAAGAGTTGGGGAGTGATCATTTCTGGAGAGAG
ATTTCATTCCGCGAGGCCACTAAAGATGATGAGGAAATGATACAATCAGCTTTGGAAATT
GAAGAAGCTATACATGGCAATGGGGATTGGACTGTGAAATTAGACATCAACCTCTTCTAC
AGTGCCAATCTAAGCCGTTCTCCTCTCTATAGTAAGCAGATGCCTTATAACTTCATTATA
TACAATGCATTTGGTCGTAATTCTCCAGATAATACCCCAGAAAAATCAGAGTATACTGGG
AGAGGGTCAGGGAAGCAGAGGAGAGCAATTGTTGCTGGGAAATGGTGTGGTAAAGTCTGG
ATGTCTAGTCAGGTTCATCCTCTGCTTGCTGAGAGGACTATTGATGAAGAACAAGAACAG
AACAAAAGCATCTCAGCCCAGATTAAGATTGAGGTGAAGTCTGAGAGACCACGTGAAAGG
ACTCCAACTGGTAAAACTGTCTCTACAGCTTGCAAGACTGGAAAAAAGAGGAGTAGTACA
GCAGTAAGTAGGAATGCTTCGAATGCTCAATTAATAATAGCAGATGATCATGATGATTCT
TTACTTAGTAGTATCCTTCAGCAGCACCGGAAAACTAATCTTAGGAGTAAGAGGATTAAA
TATGAGACTCCTGAACCTCAAAAGGATGTTGATAAGAAGAAGATATTTGGCTCAATCATT
GATGATGATCCAGATGGTGGGCCTAGCACCCGTCTGAGGAAAAGGATTCCAAAACCGAGC
AACGAGTCGCCCGCCAAGTTGGTGAAGGTCAAACCAGCTCCAACTAAGCAGCACGAAAGC
AAGAAAGGTCCCAAGGTCAAACTTCCTTCTGCAAATAGCAATGCAAAGAAAGAACCAGTA
ACGAAGGGTCCTAGAAGTAATATAGGTAAAAGGATGAGGGAGGAAGGAGAATATCATTGT
GACTTGGAAGGGTGCAGTATGAGTTTTAGCTCAAAGCAGGAGCTTACATTGCATAAAAAG
AATGTCTGTCCTGTGGAAGGGTGCAAGAAGAAGTTCTTCTCACACAAGTATTTGGTACAG
CATCGACGGGTTCATATGGACGACCGTCCTCTGAAATGCCCTTGGAAGGGCTGCAAGATG
ACTTTTAAGTGGGCATGGGCTCGAACTGAACACATAAGAGTTCATACAGGTGCACGTCCT
TATGCTTGCACTGAGACTGGCTGTGGCCAGACATTTCGTTTTGTGTCAGATTTCAGTCGT
CACAAGAGGAAGACAGGTCACGTTTCGAAGAAGGGAAGAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026610
PEP Infomation

pacid=37460330 transcript=PGSC0003DMT400039226 locus=PGSC0003DMG400015167 ID=PGSC0003DMT400039226.v4.03 annot-version=v4.03
Sequence

MVKLYVLIAGRFVKRAPALIDVPVESSDRIQKLNNGSVEGFSRTKAHKETSSLGLLALAY
ANSSDSDEDEVEADIPVEACESRHTDSEDEVFLRVIDPYGNHRQKRAVSQGRNCQKTDNS
VQLENESYPSGESNTLLGRSSHQPRSHQVAAKCISNIGEIVQNNAVAPFDHARMQFTSTS
DEDSFRIHVFCLQHAVQVEEQLRRIGGARISLLCHPDYPKLEAQAKQVAEELGSDHFWRE
ISFREATKDDEEMIQSALEIEEAIHGNGDWTVKLDINLFYSANLSRSPLYSKQMPYNFII
YNAFGRNSPDNTPEKSEYTGRGSGKQRRAIVAGKWCGKVWMSSQVHPLLAERTIDEEQEQ
NKSISAQIKIEVKSERPRERTPTGKTVSTACKTGKKRSSTAVSRNASNAQLIIADDHDDS
LLSSILQQHRKTNLRSKRIKYETPEPQKDVDKKKIFGSIIDDDPDGGPSTRLRKRIPKPS
NESPAKLVKVKPAPTKQHESKKGPKVKLPSANSNAKKEPVTKGPRSNIGKRMREEGEYHC
DLEGCSMSFSSKQELTLHKKNVCPVEGCKKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKM
TFKWAWARTEHIRVHTGARPYACTETGCGQTFRFVSDFSRHKRKTGHVSKKGRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400039226
Transcript Infomation

pacid=37460330 locus=PGSC0003DMG400015167 ID=PGSC0003DMT400039226.v4.03 annot-version=v4.03
Sequence

ATGGTTAAGCTTTATGTGTTGATTGCAGGACGGTTTGTTAAAAGGGCTCCTGCCTTGATT
GATGTCCCAGTAGAGTCATCTGATCGAATTCAGAAATTGAATAATGGAAGTGTAGAAGGG
TTTTCAAGGACCAAAGCACACAAAGAAACTTCTTCCCTCGGCCTGTTGGCTTTAGCTTAT
GCCAATTCGTCAGATTCTGATGAAGACGAGGTTGAAGCAGATATTCCTGTTGAAGCTTGT
GAAAGCAGACATACAGATTCTGAGGATGAGGTTTTTCTCCGAGTTATTGATCCTTACGGA
AACCACAGACAAAAGAGAGCTGTATCTCAAGGTAGAAACTGTCAAAAAACTGACAATTCC
GTTCAGTTGGAGAATGAAAGTTACCCATCAGGGGAATCAAATACTCTGTTAGGTAGGTCA
AGCCATCAACCAAGATCCCATCAAGTCGCTGCAAAGTGTATTTCCAATATAGGAGAAATA
GTACAAAACAATGCTGTTGCTCCATTTGATCATGCACGTATGCAATTTACTTCAACATCT
GATGAAGACTCTTTCAGAATACATGTATTCTGTCTCCAGCATGCTGTACAAGTAGAAGAA
CAGCTCCGTCGAATTGGTGGAGCACGTATTTCTCTTCTTTGTCATCCAGACTATCCCAAG
CTAGAAGCTCAAGCTAAACAAGTGGCTGAAGAGTTGGGGAGTGATCATTTCTGGAGAGAG
ATTTCATTCCGCGAGGCCACTAAAGATGATGAGGAAATGATACAATCAGCTTTGGAAATT
GAAGAAGCTATACATGGCAATGGGGATTGGACTGTGAAATTAGACATCAACCTCTTCTAC
AGTGCCAATCTAAGCCGTTCTCCTCTCTATAGTAAGCAGATGCCTTATAACTTCATTATA
TACAATGCATTTGGTCGTAATTCTCCAGATAATACCCCAGAAAAATCAGAGTATACTGGG
AGAGGGTCAGGGAAGCAGAGGAGAGCAATTGTTGCTGGGAAATGGTGTGGTAAAGTCTGG
ATGTCTAGTCAGGTTCATCCTCTGCTTGCTGAGAGGACTATTGATGAAGAACAAGAACAG
AACAAAAGCATCTCAGCCCAGATTAAGATTGAGGTGAAGTCTGAGAGACCACGTGAAAGG
ACTCCAACTGGTAAAACTGTCTCTACAGCTTGCAAGACTGGAAAAAAGAGGAGTAGTACA
GCAGTAAGTAGGAATGCTTCGAATGCTCAATTAATAATAGCAGATGATCATGATGATTCT
TTACTTAGTAGTATCCTTCAGCAGCACCGGAAAACTAATCTTAGGAGTAAGAGGATTAAA
TATGAGACTCCTGAACCTCAAAAGGATGTTGATAAGAAGAAGATATTTGGCTCAATCATT
GATGATGATCCAGATGGTGGGCCTAGCACCCGTCTGAGGAAAAGGATTCCAAAACCGAGC
AACGAGTCGCCCGCCAAGTTGGTGAAGGTCAAACCAGCTCCAACTAAGCAGCACGAAAGC
AAGAAAGGTCCCAAGGTCAAACTTCCTTCTGCAAATAGCAATGCAAAGAAAGAACCAGTA
ACGAAGGGTCCTAGAAGTAATATAGGTAAAAGGATGAGGGAGGAAGGAGAATATCATTGT
GACTTGGAAGGGTGCAGTATGAGTTTTAGCTCAAAGCAGGAGCTTACATTGCATAAAAAG
AATGTCTGTCCTGTGGAAGGGTGCAAGAAGAAGTTCTTCTCACACAAGTATTTGGTACAG
CATCGACGGGTTCATATGGACGACCGTCCTCTGAAATGCCCTTGGAAGGGCTGCAAGATG
ACTTTTAAGTGGGCATGGGCTCGAACTGAACACATAAGAGTTCATACAGGTGCACGTCCT
TATGCTTGCACTGAGACTGGCTGTGGCCAGACATTTCGTTTTGTGTCAGATTTCAGTCGT
CACAAGAGGAAGACAGGTCACGTTTCGAAGAAGGGAAGAAGTTGA