Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039222
CDS Infomation

pacid=37464078 polypeptide=PGSC0003DMP400026606 locus=PGSC0003DMG400015165 ID=PGSC0003DMT400039222.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAGAGTTGTCTCTTCTTCTCCGGCCATTTTTTCATCACAAAGAAGAGCTGCT
TCAGTTCTACCATCAACCGTCACATTACCCAATACCAACAGCTCGCTGTTATCGTCATCA
TCAGCTATCTCTTCAATTGACAGAACAAAATCAGTTACTCTCCGTAGAAAGACGAGTAGG
CGTAATGGAGTAGTGACATGTTCTGCTTCTTCGGTCCTCCCAAAGGCACTGCTATTCGAC
TGCGATGGTGTACTTGTCGATACTGAAAAAGATGGTCACCGTATCTCTTTCAATGATACC
TTTGCTGAGAAGGAATTGGGTGTAACTTGGGATGTTGATTTGTATGGAGAATTGCTCAAA
ATTGGAGGTGGAAAAGAGAGGATGACAGCCTACTTTAACAAAGTGGGTTGGCCAGAAAAT
GCACCAAAAACTGAAGAAGAAAGAAAGGAGTTTATTGCAGGACTTCACAAGCGAAAGACC
GAATTATTCATGGTTCTCATTGAGAAGAAATTGCTACCACTTCGGCCAGGTGTTGAAAAG
TTGATTGATCAGGCTCTGGGTAATGGAGTTAAAGTTGCAGTATGCAGCACTTCCAATGAA
AAGGCGGTCTCAGCCATAGTCTCGTGCTTATTGGGACCAGAGCGAGCAGAACAGATCCAG
ATATTTGCAGGTGATGTGGTTCCTCGCAAGAAGCCTGATCCGGCCATTTATCTGTTAGCA
GCCGACACCCTTGGGGTTGATCCTTCAAGTTGTGTTGTCGTAGAAGATAGTGGCATAGGT
CTTGCAGCTGCCAAAGCAGCTGGAATGACGTGCATTGTGACCAAGAGTGGGTACACAGCA
GACGAGAATTTCTCAAATGCAGATGCAGTTTTTGATTGCATTGGAGATCCTCCAGAGGAA
CGGTTTGACTTGGCATTTTGCGGAAACCTTCTTGAGAAACAATATGTCAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026606
PEP Infomation

pacid=37464078 transcript=PGSC0003DMT400039222 locus=PGSC0003DMG400015165 ID=PGSC0003DMT400039222.v4.03 annot-version=v4.03
Sequence

MALRVVSSSPAIFSSQRRAASVLPSTVTLPNTNSSLLSSSSAISSIDRTKSVTLRRKTSR
RNGVVTCSASSVLPKALLFDCDGVLVDTEKDGHRISFNDTFAEKELGVTWDVDLYGELLK
IGGGKERMTAYFNKVGWPENAPKTEEERKEFIAGLHKRKTELFMVLIEKKLLPLRPGVEK
LIDQALGNGVKVAVCSTSNEKAVSAIVSCLLGPERAEQIQIFAGDVVPRKKPDPAIYLLA
ADTLGVDPSSCVVVEDSGIGLAAAKAAGMTCIVTKSGYTADENFSNADAVFDCIGDPPEE
RFDLAFCGNLLEKQYVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400039222
Transcript Infomation

pacid=37464078 locus=PGSC0003DMG400015165 ID=PGSC0003DMT400039222.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAGAGTTGTCTCTTCTTCTCCGGCCATTTTTTCATCACAAAGAAGAGCTGCT
TCAGTTCTACCATCAACCGTCACATTACCCAATACCAACAGCTCGCTGTTATCGTCATCA
TCAGCTATCTCTTCAATTGACAGAACAAAATCAGTTACTCTCCGTAGAAAGACGAGTAGG
CGTAATGGAGTAGTGACATGTTCTGCTTCTTCGGTCCTCCCAAAGGCACTGCTATTCGAC
TGCGATGGTGTACTTGTCGATACTGAAAAAGATGGTCACCGTATCTCTTTCAATGATACC
TTTGCTGAGAAGGAATTGGGTGTAACTTGGGATGTTGATTTGTATGGAGAATTGCTCAAA
ATTGGAGGTGGAAAAGAGAGGATGACAGCCTACTTTAACAAAGTGGGTTGGCCAGAAAAT
GCACCAAAAACTGAAGAAGAAAGAAAGGAGTTTATTGCAGGACTTCACAAGCGAAAGACC
GAATTATTCATGGTTCTCATTGAGAAGAAATTGCTACCACTTCGGCCAGGTGTTGAAAAG
TTGATTGATCAGGCTCTGGGTAATGGAGTTAAAGTTGCAGTATGCAGCACTTCCAATGAA
AAGGCGGTCTCAGCCATAGTCTCGTGCTTATTGGGACCAGAGCGAGCAGAACAGATCCAG
ATATTTGCAGGTGATGTGGTTCCTCGCAAGAAGCCTGATCCGGCCATTTATCTGTTAGCA
GCCGACACCCTTGGGGTTGATCCTTCAAGTTGTGTTGTCGTAGAAGATAGTGGCATAGGT
CTTGCAGCTGCCAAAGCAGCTGGAATGACGTGCATTGTGACCAAGAGTGGGTACACAGCA
GACGAGAATTTCTCAAATGCAGATGCAGTTTTTGATTGCATTGGAGATCCTCCAGAGGAA
CGGTTTGACTTGGCATTTTGCGGAAACCTTCTTGAGAAACAATATGTCAGTTAG