Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039210
CDS Infomation

pacid=37463250 polypeptide=PGSC0003DMP400026598 locus=PGSC0003DMG400015160 ID=PGSC0003DMT400039210.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGTTGTTTCTAGTTCTTTTCTCTTTAGCTTTGATACTTAGGCTCGGGGAGAGT
TTCGATTTCCACGAGAAAGAATTAGAGACTGAGGAAAAATTCTGGGAGTTGTATGAGAGA
TGGAGAAGCCATCACACTGTATCGAGGAGCCTTGACGAGAAACACAAGAGGTTTAATGTG
TTTAAGGCTAATGTTCACTATGTTCACAACTTCAACAAGAAGGATAAGCCTTATAAGTTG
AAATTGAACAAGTTTGCAGACATGACTAACCATGAATTCAGACAGCATTATGCTGGTTCC
AAGATTAAGCATCATCGTACTTTGCTTGGAGCTTCACGAGCAAATGGAACTTTCATGTAC
GCCAACGAGGATAATGTCCCTCCTTCTATTGACTGGAGGAAGAAAGGTGCTGTCACTCCT
GTCAAAGATCAAGGCCAGTGTGGAAGTTGCTGGGCATTTTCAACAGTGGTCGCGGTAGAG
GGGATAAACCAAATCAAAACAAAGAAATTAGTATCTTTGTCGGAGCAAGAACTTGTTGAC
TGTGACACTACAGAAAACCAAGGATGCAATGGAGGATTGATGGACCTGGCATTTGACTTC
ATCAAGAAGAGGGGAGGCATCACAACAGAGGAGAAGTATCCTTATAAGGCTGAAGATGAC
AAGTGTGACATTCATAAGAGGAATACTCCGGTGGTTTCAATTGACGGACACGAGGATGTT
CCTCCTAATGATGAGGATGCACTGCTTAAAGCAGTAGCCAACCAGCCTATTTCTGTAGCT
ATAGAAGCTTCAGGTTCTCAATTCCAGTTCTACTCTGAGGGCGTATTCACCGGAGAATGT
GGTACTGAGTTGGACCATGGTGTGGCGATTGTGGGGTATGGCACAACCGTCGATGGAACC
AAATACTGGATTGTGAAGAACTCATGGGGAGCTGAATGGGGAGAAAAAGGATATATTAGG
ATGCAGCGCAAGGTTGACGCTGAAGAGGGGTTGTGTGGTATAGCAATGCAACCATCCTAC
CCCATCAAGACTTCAAGCAACCCTACAGGATCTCCTGTAACCACACCTAAGGATGAACTC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400026598
PEP Infomation

pacid=37463250 transcript=PGSC0003DMT400039210 locus=PGSC0003DMG400015160 ID=PGSC0003DMT400039210.v4.03 annot-version=v4.03
Sequence

MKKLFLVLFSLALILRLGESFDFHEKELETEEKFWELYERWRSHHTVSRSLDEKHKRFNV
FKANVHYVHNFNKKDKPYKLKLNKFADMTNHEFRQHYAGSKIKHHRTLLGASRANGTFMY
ANEDNVPPSIDWRKKGAVTPVKDQGQCGSCWAFSTVVAVEGINQIKTKKLVSLSEQELVD
CDTTENQGCNGGLMDLAFDFIKKRGGITTEEKYPYKAEDDKCDIHKRNTPVVSIDGHEDV
PPNDEDALLKAVANQPISVAIEASGSQFQFYSEGVFTGECGTELDHGVAIVGYGTTVDGT
KYWIVKNSWGAEWGEKGYIRMQRKVDAEEGLCGIAMQPSYPIKTSSNPTGSPVTTPKDEL
*

Transcript Sequence

Transcript ID

PGSC0003DMT400039210
Transcript Infomation

pacid=37463250 locus=PGSC0003DMG400015160 ID=PGSC0003DMT400039210.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGTTGTTTCTAGTTCTTTTCTCTTTAGCTTTGATACTTAGGCTCGGGGAGAGT
TTCGATTTCCACGAGAAAGAATTAGAGACTGAGGAAAAATTCTGGGAGTTGTATGAGAGA
TGGAGAAGCCATCACACTGTATCGAGGAGCCTTGACGAGAAACACAAGAGGTTTAATGTG
TTTAAGGCTAATGTTCACTATGTTCACAACTTCAACAAGAAGGATAAGCCTTATAAGTTG
AAATTGAACAAGTTTGCAGACATGACTAACCATGAATTCAGACAGCATTATGCTGGTTCC
AAGATTAAGCATCATCGTACTTTGCTTGGAGCTTCACGAGCAAATGGAACTTTCATGTAC
GCCAACGAGGATAATGTCCCTCCTTCTATTGACTGGAGGAAGAAAGGTGCTGTCACTCCT
GTCAAAGATCAAGGCCAGTGTGGAAGTTGCTGGGCATTTTCAACAGTGGTCGCGGTAGAG
GGGATAAACCAAATCAAAACAAAGAAATTAGTATCTTTGTCGGAGCAAGAACTTGTTGAC
TGTGACACTACAGAAAACCAAGGATGCAATGGAGGATTGATGGACCTGGCATTTGACTTC
ATCAAGAAGAGGGGAGGCATCACAACAGAGGAGAAGTATCCTTATAAGGCTGAAGATGAC
AAGTGTGACATTCATAAGAGGAATACTCCGGTGGTTTCAATTGACGGACACGAGGATGTT
CCTCCTAATGATGAGGATGCACTGCTTAAAGCAGTAGCCAACCAGCCTATTTCTGTAGCT
ATAGAAGCTTCAGGTTCTCAATTCCAGTTCTACTCTGAGGGCGTATTCACCGGAGAATGT
GGTACTGAGTTGGACCATGGTGTGGCGATTGTGGGGTATGGCACAACCGTCGATGGAACC
AAATACTGGATTGTGAAGAACTCATGGGGAGCTGAATGGGGAGAAAAAGGATATATTAGG
ATGCAGCGCAAGGTTGACGCTGAAGAGGGGTTGTGTGGTATAGCAATGCAACCATCCTAC
CCCATCAAGACTTCAAGCAACCCTACAGGATCTCCTGTAACCACACCTAAGGATGAACTC
TAA