Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039198
CDS Infomation

pacid=37461308 polypeptide=PGSC0003DMP400026591 locus=PGSC0003DMG400015157 ID=PGSC0003DMT400039198.v4.03 annot-version=v4.03
Sequence

ATGGCCTTCACAGCCTCACATATACACCTTTCTTTTTTGTCTTTTTTCACTGTGATCCTT
CTTGTTCAAGCAAAACTCAACCTTTACTCACCTGATCACAGTGCTCTTTTGCTTGTCCAA
AAAGGCTTAGGCATCCCTGCTCACCGCAATGCTCTTGAGAACCCATGCAACTCCGTTGGA
ATATCATGCGAAAAACGACTCACAAACAATTCATACGTGCTAAGAGTCACAAGGGTTGTC
TTCAAATCCTACGGGTTGAAGGGTACTCTGTCTCCTGCCATTGGGAGGCTTTCTGAGCTC
AAAGAACTGTCCCTCCAAAACAACAAACTCTTTGACAGAATACCAACTGAAATCGTTGAC
TCCAGGAAATTGGAAATCTTGAACCTTCAAAACAACCAATTTTCTGGCAAAGTCCCACCT
GAATTATCATCTCTAGTCCGCCTTCGTACCCTTGACCTTGGCTCTAATGAGTTATCTGGG
AACCTGAACTTCTTGAAATACTTTCCTAACCTTGAAAAACTCTCCCTTGCTGATAACATG
TTTACTGGCAGAATACCTCAATCCTTGAAATCTTTCAGAAATCTCCGGCTCCTCAACATT
TCAGGCAATAGTTTCCTTGAAGGTACGGTGCCTGCCGTGAGTCAAGTTGAGCACTTATCA
GCAGACTTAAATCGAAAAGATTATGTTCCTAAGCGTTACATTCTTGCTGAGAATGAAAGA
AGGCCAAGGCACACCCCTGCAATGGCACCAGAGTCCAAATCAGGATATGCCCAAGCTCCA
GGACCTAGTACAGTTGTAGTACCAGTAAAAAAAGACAAACACAACAAGATCAGAAGGAAG
GTAGGCGCCTGGATTCTTGGATTCTTTGCTGGAGTTTTCGCTGGGGGCTTATCGGCGTTG
GTCTTCTCTGTCCTCTTCAAGGTGCTTATGTTTTTAATCAGAGGGATCAGAAATGATTCA
GGCTTAACAATTTTCAGTCCATTGATTAAGAAAGCCGAGCACTTGGCCTTTCTGGAGAAC
GAAGATGGATTGGAATCACTAGAACTCATTGGGCAAGGTGGATGTGGAAAAGTTTATAAA
GCTGCGTTACCTGGAAGTGACGGAAAGATTATAGCCGTAAAGAAGATCATACAACCACCA
AGGGATGCTGCAGAACTCACTGAGGAAGATAGCAAGGCTATGAGTAAGAAAATGCGCCAG
ATTAAATCAGAAATCAAAATTGTAGGTCAAATCAGACACCGGAATTTGCTTCCCCTACTG
GCACATATGCCAAGACCAGACTGCCATTACTTGGTCTATGAGTACATGAAAAATGGGAGC
TTACAGGATACCCTCCAGCAAGTCAGAGAGGGGACACGGGAACTAGATTGGTCTGCACGT
CACCGAATTGCAATGGGAATAGCTGCTGGACTCGAGTATCTCCATATAAATCATACTCAG
CGTATAATTCACAGAGATCTAAAGCCAGGCAATGTCCTCCTTGATGATGACATGGAAGCT
CGAATTGCGGATTTTGGCCTTGCAAAGGCTGTCCCAGATGCTCATACACATATTACAACT
TCAAATGTGGCAGGAACTATAGGATACATCGCTCCAGAATATCATCAGACACTGAAGTTC
ACTGATAAGTGTGATATATACAGCTTCGGGGTGCTGCTAGGCGTGCTAGTTATGGGAAAG
CTTCCATCTGATGAGTTCTTCCAGAACACTTCTGAGATGAGTTTAGTGAAATGGATGAGA
AATGTCATGACTTCTGAGGATCCAAACAGAGCAATTGATCCAAAGCTGATGGGTAATGGA
AATGAGGACCAAATGCTTTTGGTTCTCAAGATTGCCTGTTTTTGTACCCTGGAGAATCCT
AAGGAGAGGCCTAATAGTAAGGATGTTAGGTGCATGTTGATGCAGATCAAGCATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026591
PEP Infomation

pacid=37461308 transcript=PGSC0003DMT400039198 locus=PGSC0003DMG400015157 ID=PGSC0003DMT400039198.v4.03 annot-version=v4.03
Sequence

MAFTASHIHLSFLSFFTVILLVQAKLNLYSPDHSALLLVQKGLGIPAHRNALENPCNSVG
ISCEKRLTNNSYVLRVTRVVFKSYGLKGTLSPAIGRLSELKELSLQNNKLFDRIPTEIVD
SRKLEILNLQNNQFSGKVPPELSSLVRLRTLDLGSNELSGNLNFLKYFPNLEKLSLADNM
FTGRIPQSLKSFRNLRLLNISGNSFLEGTVPAVSQVEHLSADLNRKDYVPKRYILAENER
RPRHTPAMAPESKSGYAQAPGPSTVVVPVKKDKHNKIRRKVGAWILGFFAGVFAGGLSAL
VFSVLFKVLMFLIRGIRNDSGLTIFSPLIKKAEHLAFLENEDGLESLELIGQGGCGKVYK
AALPGSDGKIIAVKKIIQPPRDAAELTEEDSKAMSKKMRQIKSEIKIVGQIRHRNLLPLL
AHMPRPDCHYLVYEYMKNGSLQDTLQQVREGTRELDWSARHRIAMGIAAGLEYLHINHTQ
RIIHRDLKPGNVLLDDDMEARIADFGLAKAVPDAHTHITTSNVAGTIGYIAPEYHQTLKF
TDKCDIYSFGVLLGVLVMGKLPSDEFFQNTSEMSLVKWMRNVMTSEDPNRAIDPKLMGNG
NEDQMLLVLKIACFCTLENPKERPNSKDVRCMLMQIKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400039198
Transcript Infomation

pacid=37461308 locus=PGSC0003DMG400015157 ID=PGSC0003DMT400039198.v4.03 annot-version=v4.03
Sequence

ATGGCCTTCACAGCCTCACATATACACCTTTCTTTTTTGTCTTTTTTCACTGTGATCCTT
CTTGTTCAAGCAAAACTCAACCTTTACTCACCTGATCACAGTGCTCTTTTGCTTGTCCAA
AAAGGCTTAGGCATCCCTGCTCACCGCAATGCTCTTGAGAACCCATGCAACTCCGTTGGA
ATATCATGCGAAAAACGACTCACAAACAATTCATACGTGCTAAGAGTCACAAGGGTTGTC
TTCAAATCCTACGGGTTGAAGGGTACTCTGTCTCCTGCCATTGGGAGGCTTTCTGAGCTC
AAAGAACTGTCCCTCCAAAACAACAAACTCTTTGACAGAATACCAACTGAAATCGTTGAC
TCCAGGAAATTGGAAATCTTGAACCTTCAAAACAACCAATTTTCTGGCAAAGTCCCACCT
GAATTATCATCTCTAGTCCGCCTTCGTACCCTTGACCTTGGCTCTAATGAGTTATCTGGG
AACCTGAACTTCTTGAAATACTTTCCTAACCTTGAAAAACTCTCCCTTGCTGATAACATG
TTTACTGGCAGAATACCTCAATCCTTGAAATCTTTCAGAAATCTCCGGCTCCTCAACATT
TCAGGCAATAGTTTCCTTGAAGGTACGGTGCCTGCCGTGAGTCAAGTTGAGCACTTATCA
GCAGACTTAAATCGAAAAGATTATGTTCCTAAGCGTTACATTCTTGCTGAGAATGAAAGA
AGGCCAAGGCACACCCCTGCAATGGCACCAGAGTCCAAATCAGGATATGCCCAAGCTCCA
GGACCTAGTACAGTTGTAGTACCAGTAAAAAAAGACAAACACAACAAGATCAGAAGGAAG
GTAGGCGCCTGGATTCTTGGATTCTTTGCTGGAGTTTTCGCTGGGGGCTTATCGGCGTTG
GTCTTCTCTGTCCTCTTCAAGGTGCTTATGTTTTTAATCAGAGGGATCAGAAATGATTCA
GGCTTAACAATTTTCAGTCCATTGATTAAGAAAGCCGAGCACTTGGCCTTTCTGGAGAAC
GAAGATGGATTGGAATCACTAGAACTCATTGGGCAAGGTGGATGTGGAAAAGTTTATAAA
GCTGCGTTACCTGGAAGTGACGGAAAGATTATAGCCGTAAAGAAGATCATACAACCACCA
AGGGATGCTGCAGAACTCACTGAGGAAGATAGCAAGGCTATGAGTAAGAAAATGCGCCAG
ATTAAATCAGAAATCAAAATTGTAGGTCAAATCAGACACCGGAATTTGCTTCCCCTACTG
GCACATATGCCAAGACCAGACTGCCATTACTTGGTCTATGAGTACATGAAAAATGGGAGC
TTACAGGATACCCTCCAGCAAGTCAGAGAGGGGACACGGGAACTAGATTGGTCTGCACGT
CACCGAATTGCAATGGGAATAGCTGCTGGACTCGAGTATCTCCATATAAATCATACTCAG
CGTATAATTCACAGAGATCTAAAGCCAGGCAATGTCCTCCTTGATGATGACATGGAAGCT
CGAATTGCGGATTTTGGCCTTGCAAAGGCTGTCCCAGATGCTCATACACATATTACAACT
TCAAATGTGGCAGGAACTATAGGATACATCGCTCCAGAATATCATCAGACACTGAAGTTC
ACTGATAAGTGTGATATATACAGCTTCGGGGTGCTGCTAGGCGTGCTAGTTATGGGAAAG
CTTCCATCTGATGAGTTCTTCCAGAACACTTCTGAGATGAGTTTAGTGAAATGGATGAGA
AATGTCATGACTTCTGAGGATCCAAACAGAGCAATTGATCCAAAGCTGATGGGTAATGGA
AATGAGGACCAAATGCTTTTGGTTCTCAAGATTGCCTGTTTTTGTACCCTGGAGAATCCT
AAGGAGAGGCCTAATAGTAAGGATGTTAGGTGCATGTTGATGCAGATCAAGCATTAA