Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039197
CDS Infomation

pacid=37460724 polypeptide=PGSC0003DMP400026590 locus=PGSC0003DMG400015156 ID=PGSC0003DMT400039197.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTCATGCTTTGGTGCCTGCAGCAACAACTCGCGGTATGAAGCCTACTCAGCAG
GCAATGGCTAAGCGAGAACGCCCCGTTTTCTCCTTGTCTGATGATCATGCTATGTCTAAG
AAAATCCTGGATACTCATAATCCTGATGGTCGTGAAGTTGATGTTAATGTCATTCTCCAC
ATTGCTGAGGAGGTGTTTCAACATGCCTATCCTGCTGGCATGGATGGCGTGCTTCATGGC
GCGGGAGCTCATCATCTTGAAGGTAATATTGAAGCATTGAAGTTAGAAGAAAATGCCTCA
CTTGCCTTTGATGGCATACTCGAAGGATTGGCTTATATCATACACAAAGTCTCTTGCGAG
TTAACATGCAAGTGCTCAAGTGGAGGTCATGATACACATTCAACAACAATGTCAATCTTA
GGGATGCTCTCTGGCTACCAATGGGACGCGAAACTAGTCATATCTTTAGCAGCATTTGCC
GTTACCTATGGTGAATTCTGGCTGGTGGCTCAGATGTTTGCCACTCATCCCTTGGCCAAA
TCTGTGGCCATCTTAAAACAACTGCCAGATATCATGGAACATCATGGTAGCCTCAGGTCT
CGATTCGATGCTATCAATGAACTCATCAAAGCCATTTTGGAAGTAACCAAAATCATAATC
GAATTCAAGAAGCTTCCTTCTCAGTACATAAGTGAAGATCAACCACCTTTGTCTGTCGCG
ATTACTCACATTCCTACTGCTGTTTATTGGACTATTAAAAGTATTGTTGCTTGTGCTTCC
CAACTTACTACCCTTCTTGGAATGAGCTATGACATGATAGTAGCTACGACAGCAGACACA
TGGGAAATGTCAAGTTCCACACACAAGCTGAGAAATATAAGCGAACACCTCAGAGCTGAA
TTAAACCGTTGCTATCAGCATATTCAGGACAAGATGCACGTCGAGTACTTTCAAATGCTG
GTGCACCTCTTTGAGGCAACACAATTCGACAACATGAAGATAATGAGGGCGATGATTTAT
ATCAAGGATGATTTACTTCCACTTGAAGTGGGAACCACTCACACAAGGGCTAGTGTTGAA
GTGCTAAGAAGAAAGACTGTTCTACTGCTGCTGTCAGATCTTGAGGCTAGCCATGAGGAG
ATATTAGTACTGTCTCAAATTTACCTTGAGTCAAGGTCAAGGCCAGAATTTCAATACGAA
ATAGTGTGGCTTCCAATTGTGGATCGATCAAAGGGATGGAATGACGCGCAGGAACAAAAA
TTTAAGGAGTTGCAAGCACTTATGCCGTGGTACACCTTGCACCATCCATCCTTGTTAGAG
CCAGCAATCGTCAAGTTCGTCAAAGAAAAGTGGCATTTCTCCAAGAAAATGATGCTTGTA
ACCTTGGATCCACAACAGGGCAAAGTTGCCTGTCCCAATGCTATTCACATGGCTTGGATT
TGGGGAAATTTGGCCTATCCCTTCACTATTTCAAAAGAGGAATCTCTCTGGAATATGGAA
TCTTGGAGACTTGAGCTCGTTGTTGATGGCATTGATCCCAACTTAATCGATTGGATGGCA
AGTGGTAAGTTTATCTGTTTATATGGAGGAGAAGACATGGATTGGATCCGTAATTTCACA
AAATCAGCACGAAGTGTGGCACAGAGAGCTGGGATCGACCTACAAATGTTATATGTAGGA
AAGAGCAACAACAAAGAGAGAGTTAGAAGGATCAACAGCATGATAACCGCGGAAAATTTG
AGTTACTGCTTGATGGACTTAACATCAGTTTGGTACTTCTGGACAAGAATTGAGAGCATG
TTCTACTCAAAAATGCAGCTAGGGAAAACCATCCAAGAGGATAAAGTTATGCAAGAAGTG
TTGACAATGCTGAGCTTCGATGGAAGTGATCAAGGATGGGCACTCATAAGCAGGGGATCA
TTCGAGATGGCCAGAGCTAAAAGTCAGATAATTACCAAGACATTGGAAGATTACACAATT
TGGGAAGAAGACGCAAGATCTAAAGGATTTGTGCCAGCACTTATTGAATATTTCTTGCAA
TTGCACACTCCTCAGCATTGCAATCGCTTAATTCTTCCAGGACTTGATGGCGATATTCCT
GAAATGATTGTGTGTGCTGAATGTGGAAGGGCAATGGAGAGGTTCTTCATGTACCGTTGC
TGCACTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026590
PEP Infomation

pacid=37460724 transcript=PGSC0003DMT400039197 locus=PGSC0003DMG400015156 ID=PGSC0003DMT400039197.v4.03 annot-version=v4.03
Sequence

MASHALVPAATTRGMKPTQQAMAKRERPVFSLSDDHAMSKKILDTHNPDGREVDVNVILH
IAEEVFQHAYPAGMDGVLHGAGAHHLEGNIEALKLEENASLAFDGILEGLAYIIHKVSCE
LTCKCSSGGHDTHSTTMSILGMLSGYQWDAKLVISLAAFAVTYGEFWLVAQMFATHPLAK
SVAILKQLPDIMEHHGSLRSRFDAINELIKAILEVTKIIIEFKKLPSQYISEDQPPLSVA
ITHIPTAVYWTIKSIVACASQLTTLLGMSYDMIVATTADTWEMSSSTHKLRNISEHLRAE
LNRCYQHIQDKMHVEYFQMLVHLFEATQFDNMKIMRAMIYIKDDLLPLEVGTTHTRASVE
VLRRKTVLLLLSDLEASHEEILVLSQIYLESRSRPEFQYEIVWLPIVDRSKGWNDAQEQK
FKELQALMPWYTLHHPSLLEPAIVKFVKEKWHFSKKMMLVTLDPQQGKVACPNAIHMAWI
WGNLAYPFTISKEESLWNMESWRLELVVDGIDPNLIDWMASGKFICLYGGEDMDWIRNFT
KSARSVAQRAGIDLQMLYVGKSNNKERVRRINSMITAENLSYCLMDLTSVWYFWTRIESM
FYSKMQLGKTIQEDKVMQEVLTMLSFDGSDQGWALISRGSFEMARAKSQIITKTLEDYTI
WEEDARSKGFVPALIEYFLQLHTPQHCNRLILPGLDGDIPEMIVCAECGRAMERFFMYRC
CTD*

Transcript Sequence

Transcript ID

PGSC0003DMT400039197
Transcript Infomation

pacid=37460724 locus=PGSC0003DMG400015156 ID=PGSC0003DMT400039197.v4.03 annot-version=v4.03
Sequence

ATGGCAAGTCATGCTTTGGTGCCTGCAGCAACAACTCGCGGTATGAAGCCTACTCAGCAG
GCAATGGCTAAGCGAGAACGCCCCGTTTTCTCCTTGTCTGATGATCATGCTATGTCTAAG
AAAATCCTGGATACTCATAATCCTGATGGTCGTGAAGTTGATGTTAATGTCATTCTCCAC
ATTGCTGAGGAGGTGTTTCAACATGCCTATCCTGCTGGCATGGATGGCGTGCTTCATGGC
GCGGGAGCTCATCATCTTGAAGGTAATATTGAAGCATTGAAGTTAGAAGAAAATGCCTCA
CTTGCCTTTGATGGCATACTCGAAGGATTGGCTTATATCATACACAAAGTCTCTTGCGAG
TTAACATGCAAGTGCTCAAGTGGAGGTCATGATACACATTCAACAACAATGTCAATCTTA
GGGATGCTCTCTGGCTACCAATGGGACGCGAAACTAGTCATATCTTTAGCAGCATTTGCC
GTTACCTATGGTGAATTCTGGCTGGTGGCTCAGATGTTTGCCACTCATCCCTTGGCCAAA
TCTGTGGCCATCTTAAAACAACTGCCAGATATCATGGAACATCATGGTAGCCTCAGGTCT
CGATTCGATGCTATCAATGAACTCATCAAAGCCATTTTGGAAGTAACCAAAATCATAATC
GAATTCAAGAAGCTTCCTTCTCAGTACATAAGTGAAGATCAACCACCTTTGTCTGTCGCG
ATTACTCACATTCCTACTGCTGTTTATTGGACTATTAAAAGTATTGTTGCTTGTGCTTCC
CAACTTACTACCCTTCTTGGAATGAGCTATGACATGATAGTAGCTACGACAGCAGACACA
TGGGAAATGTCAAGTTCCACACACAAGCTGAGAAATATAAGCGAACACCTCAGAGCTGAA
TTAAACCGTTGCTATCAGCATATTCAGGACAAGATGCACGTCGAGTACTTTCAAATGCTG
GTGCACCTCTTTGAGGCAACACAATTCGACAACATGAAGATAATGAGGGCGATGATTTAT
ATCAAGGATGATTTACTTCCACTTGAAGTGGGAACCACTCACACAAGGGCTAGTGTTGAA
GTGCTAAGAAGAAAGACTGTTCTACTGCTGCTGTCAGATCTTGAGGCTAGCCATGAGGAG
ATATTAGTACTGTCTCAAATTTACCTTGAGTCAAGGTCAAGGCCAGAATTTCAATACGAA
ATAGTGTGGCTTCCAATTGTGGATCGATCAAAGGGATGGAATGACGCGCAGGAACAAAAA
TTTAAGGAGTTGCAAGCACTTATGCCGTGGTACACCTTGCACCATCCATCCTTGTTAGAG
CCAGCAATCGTCAAGTTCGTCAAAGAAAAGTGGCATTTCTCCAAGAAAATGATGCTTGTA
ACCTTGGATCCACAACAGGGCAAAGTTGCCTGTCCCAATGCTATTCACATGGCTTGGATT
TGGGGAAATTTGGCCTATCCCTTCACTATTTCAAAAGAGGAATCTCTCTGGAATATGGAA
TCTTGGAGACTTGAGCTCGTTGTTGATGGCATTGATCCCAACTTAATCGATTGGATGGCA
AGTGGTAAGTTTATCTGTTTATATGGAGGAGAAGACATGGATTGGATCCGTAATTTCACA
AAATCAGCACGAAGTGTGGCACAGAGAGCTGGGATCGACCTACAAATGTTATATGTAGGA
AAGAGCAACAACAAAGAGAGAGTTAGAAGGATCAACAGCATGATAACCGCGGAAAATTTG
AGTTACTGCTTGATGGACTTAACATCAGTTTGGTACTTCTGGACAAGAATTGAGAGCATG
TTCTACTCAAAAATGCAGCTAGGGAAAACCATCCAAGAGGATAAAGTTATGCAAGAAGTG
TTGACAATGCTGAGCTTCGATGGAAGTGATCAAGGATGGGCACTCATAAGCAGGGGATCA
TTCGAGATGGCCAGAGCTAAAAGTCAGATAATTACCAAGACATTGGAAGATTACACAATT
TGGGAAGAAGACGCAAGATCTAAAGGATTTGTGCCAGCACTTATTGAATATTTCTTGCAA
TTGCACACTCCTCAGCATTGCAATCGCTTAATTCTTCCAGGACTTGATGGCGATATTCCT
GAAATGATTGTGTGTGCTGAATGTGGAAGGGCAATGGAGAGGTTCTTCATGTACCGTTGC
TGCACTGATTGA