Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039083
CDS Infomation

pacid=37471744 polypeptide=PGSC0003DMP400026532 locus=PGSC0003DMG400015112 ID=PGSC0003DMT400039083.v4.03 annot-version=v4.03
Sequence

ATGAATCCATTTCCTCCGCCGCCCCCGCTACCACTGCCACCGGTCTCCGCCTTTCCCCCG
CCACCGCTACCACTGCCACCGGCCTCCGCCTTTCCCCTGCCATCGCCACCACCTTACTTC
CACCACCCTACTCCAACCAGTGCTCTGGCATATGATCTTCCTGGTGCTCTCTCATCCCTT
ACATCTCTCCTCAACCTCTCTTCAACTACTCTCAACTCTCTCTCCTCTCTTCTTCCTATA
CCCCTTGTTCCTCCCTCTCCTTCTCCAGCTCTAATCCCATGCCCTTTCAATCCCAACCAT
CGTCTTCCCCTTTCTTCCCTCTTCTCTCACTCTCTTCATTGCCCACCCATTTCCTCTTCA
TCCGCCGATTACATTCAAACCCTAATACAACACCTCAAATACCCCCATACCCTTCACTCA
TCCAATCCCTTTACCTTACCCTTGCTTGAATCACAGTCTGACCTTTGCTTCTCTCTTGAA
ACATACCTCGATTTTGAAAATCCCACTTTCTGTTATTCTAATTGTCCTGGTGTTGTTTCT
TTTCCTATTAGGGGAGAAAATGCCAATCCTCCAATGCTCACTTTGCTTGCTGTTTTATCT
TCCGAATGTGCTAATTTTGGTCAAAATTTGATGGGGTTTCCGAAAGAAATTGTTAGTCAG
CTTCTTCCTTCGGAGGTTTATGCAATTAGGAATGAAACGGATCATTGGAATGAGTTTCCT
TTTATGTATTCATATCGTGTTCTTCGTGCGATTTTAGGATTAGGGATGAGTAGTGTGGAG
TGTTTATCTACGTGGGTAGTTGCTAATTCAGCTAGGTATTATAGTGTTGTACTTGATTTA
GCAATGAGGGATCATATACTTGTACTGTTTAAGCTTTGTTTGAAGGCTATAGTTAGGGAA
TCTAATGATTTAGCTAGTACATTTTGCAATGGAGAAGCTGAGGAATCAGTTTTGAGTAAT
CGGAGTTTTAAGTGTCCTGTCTTAGTTCAAGTCTTCGTGTGGTTGGGAACCCAGCTTTCT
GTATTATATGGAGAAATGAATGGGAAGTTGTTTGCGATCAACATGCTAAAGCAATGTATC
TGTGACTGTGCATTTAGTTCTTGTATGTTCAATGAATCTACTGATATGAAAAGTGGGGAT
GACAATCTTCAAGAGCCACAGGAAAGTGGTGAACCACTTAAAAGAAGAATGGAGAATGAG
GGAACAAATGTAATGGATGAAACACTCTCTAAAAGCGCAATTTTTGTTTCCCAAGTAGCA
GCAGCTGTTGCAGCATTGTATGAACGATCCATGCTTGAAGAAAAGCTCAAAGCACTAAGG
AGTTTACCATCACTTCCAGCTTACCAACGATCGATGGAGCACACTTATATTTCAAATAAA
GCAGATGAGGAACGGCAAAAACGCCCTAATTACAAACCCCTGCTTGAACATGATGGACTT
CTGTGGCAGCGTTCGCGAAATAATCAGGACACAGATAGGACAAAGACTAGAGAGGAATTA
TTAGCTGAGGAAAGGGATTACAAACGTAGAAGAATGTCGTATCGCGGGAAAAAGTTGAAG
CGGTCAACAACACAGGTTATGAGGGACATAATTGAGGAATACATGGAGGAAATCAGGCAA
GCAGATCCCATCAATTGCCCAACAAAAGGAGCTGAAGGGACCAAATTTCCGCCGTCCGCA
TCCTACAGGGTGGATAATAATAATTATAAGGATAAAGCTGAGTCTGGAAAGAGGCAGCCA
GATTCGTCTGCTTTAAGCAAAGTAAGGGAGGGTGGTTATAGGGAAGAGTTTCATACTGAT
GGAGAAGTCAATTCAACAGATTGCAAAGATGATTATTCTGAAAATATGGAAAAAGCATCT
CAGTGGCATCATCGACATTTAGTGGCCCAGAGAAGTAATGGGAGGTCCAGACAGGACAAA
AAAGATTACTCTAGAAGCCCAAATCAGCGAGTTGGTCGTGCATATTCACGTGAGAAATCG
ATCAGCAAAGAGAAGAGAGACTATTCAAATGATTCTAGATTAAATTTTTCCAGAAGGTAC
CACAAATCAATTGAGGAGAGTAGTCCACATAGGGAGAGAGGTGATCGTCATTTTGACTTC
AAGAAACGGAAGGCAAGGGATGCTTCTGATGATTTTGAAGACCGATATGATCCTTCAGGA
CCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026532
PEP Infomation

pacid=37471744 transcript=PGSC0003DMT400039083 locus=PGSC0003DMG400015112 ID=PGSC0003DMT400039083.v4.03 annot-version=v4.03
Sequence

MNPFPPPPPLPLPPVSAFPPPPLPLPPASAFPLPSPPPYFHHPTPTSALAYDLPGALSSL
TSLLNLSSTTLNSLSSLLPIPLVPPSPSPALIPCPFNPNHRLPLSSLFSHSLHCPPISSS
SADYIQTLIQHLKYPHTLHSSNPFTLPLLESQSDLCFSLETYLDFENPTFCYSNCPGVVS
FPIRGENANPPMLTLLAVLSSECANFGQNLMGFPKEIVSQLLPSEVYAIRNETDHWNEFP
FMYSYRVLRAILGLGMSSVECLSTWVVANSARYYSVVLDLAMRDHILVLFKLCLKAIVRE
SNDLASTFCNGEAEESVLSNRSFKCPVLVQVFVWLGTQLSVLYGEMNGKLFAINMLKQCI
CDCAFSSCMFNESTDMKSGDDNLQEPQESGEPLKRRMENEGTNVMDETLSKSAIFVSQVA
AAVAALYERSMLEEKLKALRSLPSLPAYQRSMEHTYISNKADEERQKRPNYKPLLEHDGL
LWQRSRNNQDTDRTKTREELLAEERDYKRRRMSYRGKKLKRSTTQVMRDIIEEYMEEIRQ
ADPINCPTKGAEGTKFPPSASYRVDNNNYKDKAESGKRQPDSSALSKVREGGYREEFHTD
GEVNSTDCKDDYSENMEKASQWHHRHLVAQRSNGRSRQDKKDYSRSPNQRVGRAYSREKS
ISKEKRDYSNDSRLNFSRRYHKSIEESSPHRERGDRHFDFKKRKARDASDDFEDRYDPSG
P*

Transcript Sequence

Transcript ID

PGSC0003DMT400039083
Transcript Infomation

pacid=37471744 locus=PGSC0003DMG400015112 ID=PGSC0003DMT400039083.v4.03 annot-version=v4.03
Sequence

ATGAATCCATTTCCTCCGCCGCCCCCGCTACCACTGCCACCGGTCTCCGCCTTTCCCCCG
CCACCGCTACCACTGCCACCGGCCTCCGCCTTTCCCCTGCCATCGCCACCACCTTACTTC
CACCACCCTACTCCAACCAGTGCTCTGGCATATGATCTTCCTGGTGCTCTCTCATCCCTT
ACATCTCTCCTCAACCTCTCTTCAACTACTCTCAACTCTCTCTCCTCTCTTCTTCCTATA
CCCCTTGTTCCTCCCTCTCCTTCTCCAGCTCTAATCCCATGCCCTTTCAATCCCAACCAT
CGTCTTCCCCTTTCTTCCCTCTTCTCTCACTCTCTTCATTGCCCACCCATTTCCTCTTCA
TCCGCCGATTACATTCAAACCCTAATACAACACCTCAAATACCCCCATACCCTTCACTCA
TCCAATCCCTTTACCTTACCCTTGCTTGAATCACAGTCTGACCTTTGCTTCTCTCTTGAA
ACATACCTCGATTTTGAAAATCCCACTTTCTGTTATTCTAATTGTCCTGGTGTTGTTTCT
TTTCCTATTAGGGGAGAAAATGCCAATCCTCCAATGCTCACTTTGCTTGCTGTTTTATCT
TCCGAATGTGCTAATTTTGGTCAAAATTTGATGGGGTTTCCGAAAGAAATTGTTAGTCAG
CTTCTTCCTTCGGAGGTTTATGCAATTAGGAATGAAACGGATCATTGGAATGAGTTTCCT
TTTATGTATTCATATCGTGTTCTTCGTGCGATTTTAGGATTAGGGATGAGTAGTGTGGAG
TGTTTATCTACGTGGGTAGTTGCTAATTCAGCTAGGTATTATAGTGTTGTACTTGATTTA
GCAATGAGGGATCATATACTTGTACTGTTTAAGCTTTGTTTGAAGGCTATAGTTAGGGAA
TCTAATGATTTAGCTAGTACATTTTGCAATGGAGAAGCTGAGGAATCAGTTTTGAGTAAT
CGGAGTTTTAAGTGTCCTGTCTTAGTTCAAGTCTTCGTGTGGTTGGGAACCCAGCTTTCT
GTATTATATGGAGAAATGAATGGGAAGTTGTTTGCGATCAACATGCTAAAGCAATGTATC
TGTGACTGTGCATTTAGTTCTTGTATGTTCAATGAATCTACTGATATGAAAAGTGGGGAT
GACAATCTTCAAGAGCCACAGGAAAGTGGTGAACCACTTAAAAGAAGAATGGAGAATGAG
GGAACAAATGTAATGGATGAAACACTCTCTAAAAGCGCAATTTTTGTTTCCCAAGTAGCA
GCAGCTGTTGCAGCATTGTATGAACGATCCATGCTTGAAGAAAAGCTCAAAGCACTAAGG
AGTTTACCATCACTTCCAGCTTACCAACGATCGATGGAGCACACTTATATTTCAAATAAA
GCAGATGAGGAACGGCAAAAACGCCCTAATTACAAACCCCTGCTTGAACATGATGGACTT
CTGTGGCAGCGTTCGCGAAATAATCAGGACACAGATAGGACAAAGACTAGAGAGGAATTA
TTAGCTGAGGAAAGGGATTACAAACGTAGAAGAATGTCGTATCGCGGGAAAAAGTTGAAG
CGGTCAACAACACAGGTTATGAGGGACATAATTGAGGAATACATGGAGGAAATCAGGCAA
GCAGATCCCATCAATTGCCCAACAAAAGGAGCTGAAGGGACCAAATTTCCGCCGTCCGCA
TCCTACAGGGTGGATAATAATAATTATAAGGATAAAGCTGAGTCTGGAAAGAGGCAGCCA
GATTCGTCTGCTTTAAGCAAAGTAAGGGAGGGTGGTTATAGGGAAGAGTTTCATACTGAT
GGAGAAGTCAATTCAACAGATTGCAAAGATGATTATTCTGAAAATATGGAAAAAGCATCT
CAGTGGCATCATCGACATTTAGTGGCCCAGAGAAGTAATGGGAGGTCCAGACAGGACAAA
AAAGATTACTCTAGAAGCCCAAATCAGCGAGTTGGTCGTGCATATTCACGTGAGAAATCG
ATCAGCAAAGAGAAGAGAGACTATTCAAATGATTCTAGATTAAATTTTTCCAGAAGGTAC
CACAAATCAATTGAGGAGAGTAGTCCACATAGGGAGAGAGGTGATCGTCATTTTGACTTC
AAGAAACGGAAGGCAAGGGATGCTTCTGATGATTTTGAAGACCGATATGATCCTTCAGGA
CCTTAG