Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400039054
CDS Infomation

pacid=37468039 polypeptide=PGSC0003DMP400026516 locus=PGSC0003DMG400015100 ID=PGSC0003DMT400039054.v4.03 annot-version=v4.03
Sequence

ATGACTTCCACAATTGCAAATTATGGAGTTTCTCACTCTTTTTCACCGTCTACTTCCTAT
TCACTTGATTTCACCCTTCCTTCAAAATCAATCTCCATGAAAAATCACACAACAAAAACT
AAAATCCATTCTGCTTTACTCACTTTCCCAAAACAAAACAATACCCCCAAAAAACAACCA
CAATTTCAAACACCTGATTGGAATTTTTTCCAAAAGGCAGCAGCAAAAGCTTTAGATATA
GTAGAAAGCGCGTTAGTCTCACGCGAACTACAAAACCCTCTTCCTAAAACTGCAGACCCA
CGTGTACAAATCGCCGGTAACTTTGCTCCGGTACCGGAGCAATCAGTCCGGCATAATCTT
CCCGTTATAGGGACGATCCCTGATTGCATTAACGGGGTTTATGTCCGGAATGGAGCGAAC
CCGCTTTTCGAACCGGTTGCCGGTCATCATCTTTTTGACGGTGACGGCATGGTTCATGCT
GTCACTGTCGAAAATGGTTCAGTGAGCTATTCTTGCCGTTTTACTGAAACGGAAAGATTA
GTTCAAGAGCGTGAATTGGGTCGCCCTGTTTTTCCTAAAGCTATTGGTGAGCTTCATGGT
CATTCTGGAATTGCGAGGCTATTGTTGTTCTATGCCCGTGGAGTTTTCGGGCTTGTGGAT
CATAGCCATGGGACTGGAGTAGCTAATGCTGGATTGGTTTACTTTAATAACAGACTTCTA
GCAATGTCTGAAGATGATGTACCTTATAATGTTCAAGTATTGCCTTCTGGCGATCTTCAA
ACAGTTGGTAGGTACAATTTCGATGATCAATTGAAAAGCACAATGATAGCTCACCCGAAA
ATTGATCCAGTTTCGGGTGAGCTTTTTGCTTTGAGCTACGATGTAGTTCAAAAGCCTTAC
TTGAAATCCTTCAAGTTTTCTCCGGACGGGGAAAAATCGCCCGACGTTGAAATCCCACTG
GATGTTCCAACGATGATGCATGATTTTGCGATTACTGAGAATTACGTTGTAATTCCTGAT
CAGCAAGTTGTGTTCAAGCTTCAGGAAATGATCAAAGGAGGCTCCCCTGTGATTTATGAC
AAAAATAAGAAATCAAGGTTCGGAATTCTACCCAAAAATGCTAAAGATTCTGATAATATT
ATTTGGGTAGAATCACCCGAAACGTTCTGTTTTCATCTATGGAATGCTTGGGAAGAGCCA
GAAACAGATGAAGTCGTTGTTATTGGTTCATGCATGACACCACCAGACTCAATTTTCAAA
GAATGTAGTGAGAATTTAAAGAGTGTATTATCAGAAATAAGGCTCAATTTGAAGACCGGA
GAGTCGACAAGACGACAACTACTTTCACCCTCAGATCAGGTAAATTTAGAAGCTGGAATG
GTGAACAGAAACAAACTCGGTAGAAAAACACAATTCACTTATCTTGCAATTGCAGAGCCA
TGGCCAAAAGTATCTGGATTTGCAAAAGTCGACTTATCAACAGGGGAAATTAAAAAACAT
ATATATGGAGATAAACGATATGGAGGTGAACCATTATTTTTACCAAGAAATGTGAACTCA
GAGAAAGAAGACGACGGATACATTCTTGCATTTTGCCATGATGAAAAGACATGGAAATCA
GAACTACAAATTGTGAATGCCATGACTCTAGAATTAGAAGCCACTGTCAAGCTACCTTCA
AGAGTTCCATATGGTTTTCATGGGACTTTCATTAGCTCAAAGGACTTGCAAAATCAAGTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400026516
PEP Infomation

pacid=37468039 transcript=PGSC0003DMT400039054 locus=PGSC0003DMG400015100 ID=PGSC0003DMT400039054.v4.03 annot-version=v4.03
Sequence

MTSTIANYGVSHSFSPSTSYSLDFTLPSKSISMKNHTTKTKIHSALLTFPKQNNTPKKQP
QFQTPDWNFFQKAAAKALDIVESALVSRELQNPLPKTADPRVQIAGNFAPVPEQSVRHNL
PVIGTIPDCINGVYVRNGANPLFEPVAGHHLFDGDGMVHAVTVENGSVSYSCRFTETERL
VQERELGRPVFPKAIGELHGHSGIARLLLFYARGVFGLVDHSHGTGVANAGLVYFNNRLL
AMSEDDVPYNVQVLPSGDLQTVGRYNFDDQLKSTMIAHPKIDPVSGELFALSYDVVQKPY
LKSFKFSPDGEKSPDVEIPLDVPTMMHDFAITENYVVIPDQQVVFKLQEMIKGGSPVIYD
KNKKSRFGILPKNAKDSDNIIWVESPETFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFK
ECSENLKSVLSEIRLNLKTGESTRRQLLSPSDQVNLEAGMVNRNKLGRKTQFTYLAIAEP
WPKVSGFAKVDLSTGEIKKHIYGDKRYGGEPLFLPRNVNSEKEDDGYILAFCHDEKTWKS
ELQIVNAMTLELEATVKLPSRVPYGFHGTFISSKDLQNQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400039054
Transcript Infomation

pacid=37468039 locus=PGSC0003DMG400015100 ID=PGSC0003DMT400039054.v4.03 annot-version=v4.03
Sequence

ATGACTTCCACAATTGCAAATTATGGAGTTTCTCACTCTTTTTCACCGTCTACTTCCTAT
TCACTTGATTTCACCCTTCCTTCAAAATCAATCTCCATGAAAAATCACACAACAAAAACT
AAAATCCATTCTGCTTTACTCACTTTCCCAAAACAAAACAATACCCCCAAAAAACAACCA
CAATTTCAAACACCTGATTGGAATTTTTTCCAAAAGGCAGCAGCAAAAGCTTTAGATATA
GTAGAAAGCGCGTTAGTCTCACGCGAACTACAAAACCCTCTTCCTAAAACTGCAGACCCA
CGTGTACAAATCGCCGGTAACTTTGCTCCGGTACCGGAGCAATCAGTCCGGCATAATCTT
CCCGTTATAGGGACGATCCCTGATTGCATTAACGGGGTTTATGTCCGGAATGGAGCGAAC
CCGCTTTTCGAACCGGTTGCCGGTCATCATCTTTTTGACGGTGACGGCATGGTTCATGCT
GTCACTGTCGAAAATGGTTCAGTGAGCTATTCTTGCCGTTTTACTGAAACGGAAAGATTA
GTTCAAGAGCGTGAATTGGGTCGCCCTGTTTTTCCTAAAGCTATTGGTGAGCTTCATGGT
CATTCTGGAATTGCGAGGCTATTGTTGTTCTATGCCCGTGGAGTTTTCGGGCTTGTGGAT
CATAGCCATGGGACTGGAGTAGCTAATGCTGGATTGGTTTACTTTAATAACAGACTTCTA
GCAATGTCTGAAGATGATGTACCTTATAATGTTCAAGTATTGCCTTCTGGCGATCTTCAA
ACAGTTGGTAGGTACAATTTCGATGATCAATTGAAAAGCACAATGATAGCTCACCCGAAA
ATTGATCCAGTTTCGGGTGAGCTTTTTGCTTTGAGCTACGATGTAGTTCAAAAGCCTTAC
TTGAAATCCTTCAAGTTTTCTCCGGACGGGGAAAAATCGCCCGACGTTGAAATCCCACTG
GATGTTCCAACGATGATGCATGATTTTGCGATTACTGAGAATTACGTTGTAATTCCTGAT
CAGCAAGTTGTGTTCAAGCTTCAGGAAATGATCAAAGGAGGCTCCCCTGTGATTTATGAC
AAAAATAAGAAATCAAGGTTCGGAATTCTACCCAAAAATGCTAAAGATTCTGATAATATT
ATTTGGGTAGAATCACCCGAAACGTTCTGTTTTCATCTATGGAATGCTTGGGAAGAGCCA
GAAACAGATGAAGTCGTTGTTATTGGTTCATGCATGACACCACCAGACTCAATTTTCAAA
GAATGTAGTGAGAATTTAAAGAGTGTATTATCAGAAATAAGGCTCAATTTGAAGACCGGA
GAGTCGACAAGACGACAACTACTTTCACCCTCAGATCAGGTAAATTTAGAAGCTGGAATG
GTGAACAGAAACAAACTCGGTAGAAAAACACAATTCACTTATCTTGCAATTGCAGAGCCA
TGGCCAAAAGTATCTGGATTTGCAAAAGTCGACTTATCAACAGGGGAAATTAAAAAACAT
ATATATGGAGATAAACGATATGGAGGTGAACCATTATTTTTACCAAGAAATGTGAACTCA
GAGAAAGAAGACGACGGATACATTCTTGCATTTTGCCATGATGAAAAGACATGGAAATCA
GAACTACAAATTGTGAATGCCATGACTCTAGAATTAGAAGCCACTGTCAAGCTACCTTCA
AGAGTTCCATATGGTTTTCATGGGACTTTCATTAGCTCAAAGGACTTGCAAAATCAAGTA
TAA