Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038863
CDS Infomation

pacid=37432562 polypeptide=PGSC0003DMP400026414 locus=PGSC0003DMG400015020 ID=PGSC0003DMT400038863.v4.03 annot-version=v4.03
Sequence

ATGGATTGGACCAGAGGGCATATAATAGGCCACGGCTCCACTGCTGCCGTCTGGGCCGCC
AAATCACGATTCTCAGGTGAAGTTTTTGCTGTTAAGTCAGTGGAGCTATCCAAGTCACAG
TTATTGCAAAAGGAGCAGAAAACTTTGTCCGAATTGAGCTCCCCTTATATAGTTAGCTAC
AAGGGGTATGATATTACAAAAGAGAATGACAAACTCATGTTTAATCTTATGATGGAGTAT
ATGCCGGACGGTACACTTATCGATGAAAATCGGAAACAGGGTGGTCGGATTAACGAGCCG
TTGATTGGGTATTATACGAAGCAAATTGTTCAAGGACTAGAGTACGTACATTCAAGGAGC
ATAGCACACTGTGACATAAAGGGGCAAAACATTTTGTTAGGTAAAACCGGTGCCAAAATT
GCCGATTTTGGTTGTGCCAGGTGGATTGATCCGGCAGACAGGGGCGGTGATGCTAAATCA
ATGGGAGGAACGCCGATGTTCATGGCACCGGAGGTGGCGCGTGGGGAAGAACATGGGTGT
TCAGCAGATATTTGGGGATTGGGATGTACAATTATTGAAATGGCCACTGGTGGATCGCCA
TGGACTAATGTGACAAACGCAGCTTCATTGCTTTACAAAATTGCATTTTCTGGGAAATCC
CCTGAAATTCCTAAATTCCTCTCTTTACAAGCAAGGGATTTCTTAAGCAAATGCTTGATA
AGAGATGCAAAAGAAAGATGGTCAGCTAAACAACTCCTCAAACATCCATTTCTTGAGGAA
TCCGATTTGAATTCCGCGGCAAATCAAGATTTTGTTACAAGCTCCCCAACAAGCATTCTT
GATCAAGACATATGGAATTCAGTAGAGGAATCAGAAACTACGATATTACAAACAGTTAGC
TCTCCTCTGCAAAGGGTAAGAGAATTGGGTTCGAATTCAAGAGAATTGAATTGGAGATGG
AATGATGATCACAGATGGATCACAGTTAGAAGGAGCAATGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400026414
PEP Infomation

pacid=37432562 transcript=PGSC0003DMT400038863 locus=PGSC0003DMG400015020 ID=PGSC0003DMT400038863.v4.03 annot-version=v4.03
Sequence

MDWTRGHIIGHGSTAAVWAAKSRFSGEVFAVKSVELSKSQLLQKEQKTLSELSSPYIVSY
KGYDITKENDKLMFNLMMEYMPDGTLIDENRKQGGRINEPLIGYYTKQIVQGLEYVHSRS
IAHCDIKGQNILLGKTGAKIADFGCARWIDPADRGGDAKSMGGTPMFMAPEVARGEEHGC
SADIWGLGCTIIEMATGGSPWTNVTNAASLLYKIAFSGKSPEIPKFLSLQARDFLSKCLI
RDAKERWSAKQLLKHPFLEESDLNSAANQDFVTSSPTSILDQDIWNSVEESETTILQTVS
SPLQRVRELGSNSRELNWRWNDDHRWITVRRSNE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038863
Transcript Infomation

pacid=37432562 locus=PGSC0003DMG400015020 ID=PGSC0003DMT400038863.v4.03 annot-version=v4.03
Sequence

ATGGATTGGACCAGAGGGCATATAATAGGCCACGGCTCCACTGCTGCCGTCTGGGCCGCC
AAATCACGATTCTCAGGTGAAGTTTTTGCTGTTAAGTCAGTGGAGCTATCCAAGTCACAG
TTATTGCAAAAGGAGCAGAAAACTTTGTCCGAATTGAGCTCCCCTTATATAGTTAGCTAC
AAGGGGTATGATATTACAAAAGAGAATGACAAACTCATGTTTAATCTTATGATGGAGTAT
ATGCCGGACGGTACACTTATCGATGAAAATCGGAAACAGGGTGGTCGGATTAACGAGCCG
TTGATTGGGTATTATACGAAGCAAATTGTTCAAGGACTAGAGTACGTACATTCAAGGAGC
ATAGCACACTGTGACATAAAGGGGCAAAACATTTTGTTAGGTAAAACCGGTGCCAAAATT
GCCGATTTTGGTTGTGCCAGGTGGATTGATCCGGCAGACAGGGGCGGTGATGCTAAATCA
ATGGGAGGAACGCCGATGTTCATGGCACCGGAGGTGGCGCGTGGGGAAGAACATGGGTGT
TCAGCAGATATTTGGGGATTGGGATGTACAATTATTGAAATGGCCACTGGTGGATCGCCA
TGGACTAATGTGACAAACGCAGCTTCATTGCTTTACAAAATTGCATTTTCTGGGAAATCC
CCTGAAATTCCTAAATTCCTCTCTTTACAAGCAAGGGATTTCTTAAGCAAATGCTTGATA
AGAGATGCAAAAGAAAGATGGTCAGCTAAACAACTCCTCAAACATCCATTTCTTGAGGAA
TCCGATTTGAATTCCGCGGCAAATCAAGATTTTGTTACAAGCTCCCCAACAAGCATTCTT
GATCAAGACATATGGAATTCAGTAGAGGAATCAGAAACTACGATATTACAAACAGTTAGC
TCTCCTCTGCAAAGGGTAAGAGAATTGGGTTCGAATTCAAGAGAATTGAATTGGAGATGG
AATGATGATCACAGATGGATCACAGTTAGAAGGAGCAATGAATAA