Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038860
CDS Infomation

pacid=37433429 polypeptide=PGSC0003DMP400026412 locus=PGSC0003DMG400015018 ID=PGSC0003DMT400038860.v4.03 annot-version=v4.03
Sequence

ATGGATTGGACTAGAGGCCAGACCATTGGCCATGGATCCACTGCCGCTGTCTCCGTCGCT
AAGTCACGTTTCTCCGATGAGGTCTTTGCTGTCAAGTCAGTGGAGCTATCCCAGTCGCAG
TTATTACAAAAGGAGCAGAAAATTCTGTCCCAATTGAGCTCCTCTTATGTAGTTAGCTAC
AAGGGGTATGATGTTACAAAAGAGAATGACAAACTCATGTTTAATCTTATGATGGAGTAT
ATGCCGGATGGTACACTTTCCGATGAAATTCGGAAACAGGGTGGTCGGATCAATGAGCCG
TTGATCGGGTATTATACGAAGCAAATTTTAAAAGGACTAGAATACCTACATTCAGGTGGC
ATAGCACATTGTGATATTAAGGGGCAGAATATTTTGTTAGGTAAAACCGGTGCCAAAATT
GCTGATTTTGGGTGTGCCAGGTGGATTGATCCGGCAGAGAGGGATGGCGGCGCAGAGCCA
ATTGGAGGAACACCGATGTTCATGGCACCAGAGGTGGCGCGTGGGGAAGAACAGGGGTGT
CCTGCAGATATTTGGGGATTGGGATGTACAATTATTGAAATGGTCACTGGTGGATCACCA
TGGACTAATGTGACAAATGCAGCTTCATTGCTTTACAAAATTGCATTTTCAGGGCAATCC
CCTGAAATCCCAAAATTCTTGTCCTTACAAGCAAGGGATTTCTTAAGCAAATGCTTAAGA
AGAGATCCAAAAGAAAGATGGATAGCTAAACAACTCCTCAAACATACATTTCTTGAAGAA
TTCAATTTGAATTCGAATTCAAATCAGAATTTTGTGACGAGTTCTCCAACAAGCATTCTT
GATCAAGACATATGGAATTCCGTGGAGGAATCAGAAACTACAATATTACAAACAGGTAGC
TCTCCCCTGCAAAGGGTAAGAGAATTGTGTTCGAATTCAGGAGAATTAAATTGGAGATGG
AATGATGATGAGAGATGGATCACAATTAGAAGCAGCAACAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400026412
PEP Infomation

pacid=37433429 transcript=PGSC0003DMT400038860 locus=PGSC0003DMG400015018 ID=PGSC0003DMT400038860.v4.03 annot-version=v4.03
Sequence

MDWTRGQTIGHGSTAAVSVAKSRFSDEVFAVKSVELSQSQLLQKEQKILSQLSSSYVVSY
KGYDVTKENDKLMFNLMMEYMPDGTLSDEIRKQGGRINEPLIGYYTKQILKGLEYLHSGG
IAHCDIKGQNILLGKTGAKIADFGCARWIDPAERDGGAEPIGGTPMFMAPEVARGEEQGC
PADIWGLGCTIIEMVTGGSPWTNVTNAASLLYKIAFSGQSPEIPKFLSLQARDFLSKCLR
RDPKERWIAKQLLKHTFLEEFNLNSNSNQNFVTSSPTSILDQDIWNSVEESETTILQTGS
SPLQRVRELCSNSGELNWRWNDDERWITIRSSNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400038860
Transcript Infomation

pacid=37433429 locus=PGSC0003DMG400015018 ID=PGSC0003DMT400038860.v4.03 annot-version=v4.03
Sequence

ATGGATTGGACTAGAGGCCAGACCATTGGCCATGGATCCACTGCCGCTGTCTCCGTCGCT
AAGTCACGTTTCTCCGATGAGGTCTTTGCTGTCAAGTCAGTGGAGCTATCCCAGTCGCAG
TTATTACAAAAGGAGCAGAAAATTCTGTCCCAATTGAGCTCCTCTTATGTAGTTAGCTAC
AAGGGGTATGATGTTACAAAAGAGAATGACAAACTCATGTTTAATCTTATGATGGAGTAT
ATGCCGGATGGTACACTTTCCGATGAAATTCGGAAACAGGGTGGTCGGATCAATGAGCCG
TTGATCGGGTATTATACGAAGCAAATTTTAAAAGGACTAGAATACCTACATTCAGGTGGC
ATAGCACATTGTGATATTAAGGGGCAGAATATTTTGTTAGGTAAAACCGGTGCCAAAATT
GCTGATTTTGGGTGTGCCAGGTGGATTGATCCGGCAGAGAGGGATGGCGGCGCAGAGCCA
ATTGGAGGAACACCGATGTTCATGGCACCAGAGGTGGCGCGTGGGGAAGAACAGGGGTGT
CCTGCAGATATTTGGGGATTGGGATGTACAATTATTGAAATGGTCACTGGTGGATCACCA
TGGACTAATGTGACAAATGCAGCTTCATTGCTTTACAAAATTGCATTTTCAGGGCAATCC
CCTGAAATCCCAAAATTCTTGTCCTTACAAGCAAGGGATTTCTTAAGCAAATGCTTAAGA
AGAGATCCAAAAGAAAGATGGATAGCTAAACAACTCCTCAAACATACATTTCTTGAAGAA
TTCAATTTGAATTCGAATTCAAATCAGAATTTTGTGACGAGTTCTCCAACAAGCATTCTT
GATCAAGACATATGGAATTCCGTGGAGGAATCAGAAACTACAATATTACAAACAGGTAGC
TCTCCCCTGCAAAGGGTAAGAGAATTGTGTTCGAATTCAGGAGAATTAAATTGGAGATGG
AATGATGATGAGAGATGGATCACAATTAGAAGCAGCAACAGATGA