Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038857
CDS Infomation

pacid=37434069 polypeptide=PGSC0003DMP400026410 locus=PGSC0003DMG400015016 ID=PGSC0003DMT400038857.v4.03 annot-version=v4.03
Sequence

ATGGGTACTAGATATGGAGCCTCTTTAGCTGCACTGTGCTTGTTGCTTTTTTTATCCCCT
TTGGTGTTTTCGGTATCAAATGATGGACTGGTTAGAGTTGGAATTAAGAAGAGGAAGTTG
GATCAGACCAACCAAGTTTTTGGAGGCATCGATTCTAATGGAGTGCATTCTGCACGAAAG
TATCGTCTAGGTGGAAATGTAGGAGATTCAGACACTGATATTATTGCACTAAAGAACTAC
TTGGATGCTCAGTACTTTGGTGAGATTAGCATTGGCTCACCACCTCAAAAGTTCACTGTC
ATCTTTGATACTGGAAGTTCTAATCTTTGGGTGCCCTCCGCCAAATGTCATTTTTCACTT
GCTTGTTATCTCCACCCAAAGTACAAGTCAAGTCACTCCAGTACCTACAAAAAGAATGGG
ACATCTGCTGCAATCCACTATGGAACTGGATCTATTTCTGGATATTTTAGCAATGACAAT
GTCAAAGTTGGCGATCTTGTTGTCAAAGATCAAGACTTTATTGAGGCAACTCGAGAACCA
GGCATCACCTTTTTGGCAGCCAAATTTGATGGTATTCTTGGACTTGGATTTCAAGAGATA
TCTGTAGGGAAAGCTGTCCCTGTCTGGTACAATATGGTAAATCAAGGTCTTGTAAAACAA
TCTGTCTTCTCATTCTGGTTCAATCGGAATGCTGAAGAGGAGGAAGGAGGTGAACTTGTT
TTCGGTGGAGTTGATCCCAAACATTTCAAGGGTGAACATACATATGTTCCTGTAACTCAC
AAAGGCTACTGGCAGTTTGATATGGGTGACGTGCTTGTCGGTGGTGAAACAACTGGATTT
TGTTCTGGTGGTTGTTCAGCAATTGCAGACTCTGGAACGTCCTTATTGGCAGGACCAACG
ACCATTATTACTCAAATTAATCATGCTATTGGAGCGTCAGGAGTTGTCAGCCAGGAGTGC
AAGTCAGTAGTCAGTGAATATGGAAAAACTATACTGGATCTACTCGAATCAAAGGCGGCG
CCTCAGCAGATCTGCTCCCAAATCAATTTATGCTCCAGAGATGGTGGACGAGATGTTAGC
ATGATTATTGAGAGTGTGGTGGACAAACACAATGAGGCTTCGAATGGCGTGCATGACGAG
ATGTGCAGGGTTTGTGAGATGGCTGTGGTATGGATGCAAAACCAATTAAGGCGAAATGAA
ACTGCAGATAGAATCTTTGACTATATGAATAAGCTTTGCGACCGATTGCCCAGTCCGATG
GGAGAATCTGCAGTTAATTGCAACAGCCTTGCTTCCATGCCTAATGTTTCCTTTACCGTT
GGTAATAAAACATTTGAGCTGACGCCGCAGCAGTATGTCCTTAAAGTTGGTGAGGCTCCT
GTTACGCAGTGCATAAGTGGATTCACAGCATTAGATGTGCCGCCACCTCGTGGACCCCTT
TGGATCTTGGGAGATGTTTTCATGGGTCGCTACCACACAGTGTTTGACTCCGAGAAAATG
AGAGTTGGTTTCGCGGAAGCAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026410
PEP Infomation

pacid=37434069 transcript=PGSC0003DMT400038857 locus=PGSC0003DMG400015016 ID=PGSC0003DMT400038857.v4.03 annot-version=v4.03
Sequence

MGTRYGASLAALCLLLFLSPLVFSVSNDGLVRVGIKKRKLDQTNQVFGGIDSNGVHSARK
YRLGGNVGDSDTDIIALKNYLDAQYFGEISIGSPPQKFTVIFDTGSSNLWVPSAKCHFSL
ACYLHPKYKSSHSSTYKKNGTSAAIHYGTGSISGYFSNDNVKVGDLVVKDQDFIEATREP
GITFLAAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVKQSVFSFWFNRNAEEEEGGELV
FGGVDPKHFKGEHTYVPVTHKGYWQFDMGDVLVGGETTGFCSGGCSAIADSGTSLLAGPT
TIITQINHAIGASGVVSQECKSVVSEYGKTILDLLESKAAPQQICSQINLCSRDGGRDVS
MIIESVVDKHNEASNGVHDEMCRVCEMAVVWMQNQLRRNETADRIFDYMNKLCDRLPSPM
GESAVNCNSLASMPNVSFTVGNKTFELTPQQYVLKVGEAPVTQCISGFTALDVPPPRGPL
WILGDVFMGRYHTVFDSEKMRVGFAEAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400038857
Transcript Infomation

pacid=37434069 locus=PGSC0003DMG400015016 ID=PGSC0003DMT400038857.v4.03 annot-version=v4.03
Sequence

ATGGGTACTAGATATGGAGCCTCTTTAGCTGCACTGTGCTTGTTGCTTTTTTTATCCCCT
TTGGTGTTTTCGGTATCAAATGATGGACTGGTTAGAGTTGGAATTAAGAAGAGGAAGTTG
GATCAGACCAACCAAGTTTTTGGAGGCATCGATTCTAATGGAGTGCATTCTGCACGAAAG
TATCGTCTAGGTGGAAATGTAGGAGATTCAGACACTGATATTATTGCACTAAAGAACTAC
TTGGATGCTCAGTACTTTGGTGAGATTAGCATTGGCTCACCACCTCAAAAGTTCACTGTC
ATCTTTGATACTGGAAGTTCTAATCTTTGGGTGCCCTCCGCCAAATGTCATTTTTCACTT
GCTTGTTATCTCCACCCAAAGTACAAGTCAAGTCACTCCAGTACCTACAAAAAGAATGGG
ACATCTGCTGCAATCCACTATGGAACTGGATCTATTTCTGGATATTTTAGCAATGACAAT
GTCAAAGTTGGCGATCTTGTTGTCAAAGATCAAGACTTTATTGAGGCAACTCGAGAACCA
GGCATCACCTTTTTGGCAGCCAAATTTGATGGTATTCTTGGACTTGGATTTCAAGAGATA
TCTGTAGGGAAAGCTGTCCCTGTCTGGTACAATATGGTAAATCAAGGTCTTGTAAAACAA
TCTGTCTTCTCATTCTGGTTCAATCGGAATGCTGAAGAGGAGGAAGGAGGTGAACTTGTT
TTCGGTGGAGTTGATCCCAAACATTTCAAGGGTGAACATACATATGTTCCTGTAACTCAC
AAAGGCTACTGGCAGTTTGATATGGGTGACGTGCTTGTCGGTGGTGAAACAACTGGATTT
TGTTCTGGTGGTTGTTCAGCAATTGCAGACTCTGGAACGTCCTTATTGGCAGGACCAACG
ACCATTATTACTCAAATTAATCATGCTATTGGAGCGTCAGGAGTTGTCAGCCAGGAGTGC
AAGTCAGTAGTCAGTGAATATGGAAAAACTATACTGGATCTACTCGAATCAAAGGCGGCG
CCTCAGCAGATCTGCTCCCAAATCAATTTATGCTCCAGAGATGGTGGACGAGATGTTAGC
ATGATTATTGAGAGTGTGGTGGACAAACACAATGAGGCTTCGAATGGCGTGCATGACGAG
ATGTGCAGGGTTTGTGAGATGGCTGTGGTATGGATGCAAAACCAATTAAGGCGAAATGAA
ACTGCAGATAGAATCTTTGACTATATGAATAAGCTTTGCGACCGATTGCCCAGTCCGATG
GGAGAATCTGCAGTTAATTGCAACAGCCTTGCTTCCATGCCTAATGTTTCCTTTACCGTT
GGTAATAAAACATTTGAGCTGACGCCGCAGCAGTATGTCCTTAAAGTTGGTGAGGCTCCT
GTTACGCAGTGCATAAGTGGATTCACAGCATTAGATGTGCCGCCACCTCGTGGACCCCTT
TGGATCTTGGGAGATGTTTTCATGGGTCGCTACCACACAGTGTTTGACTCCGAGAAAATG
AGAGTTGGTTTCGCGGAAGCAGCTTAA