Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038848
CDS Infomation

pacid=37472145 polypeptide=PGSC0003DMP400026402 locus=PGSC0003DMG400015011 ID=PGSC0003DMT400038848.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACATCTCTTGTACATCCACTCAGTTCAGCCTTTTCTATAAATTTGTTCAAG
AATCATCATCAAACAATCAGAAAACCTCAAATTGGAAATGGGGTTACTAGGAAATGGGGT
TTAAGATTGTGGGCACAAGAGAATTTGATGGGTACTGTTGAAGAAGCTGAAAGGTACAAT
ACAACTAAGCGCAGAGATTTGTTAATGGGGTTGGGGTTTTGTGGGGTTACAAGTTTTTTG
GTGGGTTCTTGTTATGCTGAAGCAGCTGGATTGCCACCAGAGGAAAAACCAAAGCTTTGT
GATGCTACATGTGAGAAAGAGCTTGAAAATGTTCCTATGGTAACAACTGAGTCAGGCTTG
CAGTATAAGGACATCAAAGTTGGTCGAGGCCCTAGTCCCCCTGTTGGTTTCCAGGTCGCT
GCAAATTATGTTGCCATGGTTCCCTCGGGACAAATTTTTGACAGCTCCCTGGAGAAAGGT
CGACCTTACATTTTCCGTGTAGGTGCTGACCAGGTAGTCAAAGGACTTGATGAAGGGATC
TTGAGCATGAAAGTTGGAGGACTACGTCGACTCTATGTACCTGGATCTTTGGCGTTTCCA
AAAGGCTTGACATCGGCTCCTGGAAGGCCAAGAGTGGCTCCTAACAGCCCAGTGGTATTC
GACGTGAGTTTGGAGTTCATACCAGGCCTTGAATCCGACGACGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026402
PEP Infomation

pacid=37472145 transcript=PGSC0003DMT400038848 locus=PGSC0003DMG400015011 ID=PGSC0003DMT400038848.v4.03 annot-version=v4.03
Sequence

MASTSLVHPLSSAFSINLFKNHHQTIRKPQIGNGVTRKWGLRLWAQENLMGTVEEAERYN
TTKRRDLLMGLGFCGVTSFLVGSCYAEAAGLPPEEKPKLCDATCEKELENVPMVTTESGL
QYKDIKVGRGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGRPYIFRVGADQVVKGLDEGI
LSMKVGGLRRLYVPGSLAFPKGLTSAPGRPRVAPNSPVVFDVSLEFIPGLESDDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038848
Transcript Infomation

pacid=37472145 locus=PGSC0003DMG400015011 ID=PGSC0003DMT400038848.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACATCTCTTGTACATCCACTCAGTTCAGCCTTTTCTATAAATTTGTTCAAG
AATCATCATCAAACAATCAGAAAACCTCAAATTGGAAATGGGGTTACTAGGAAATGGGGT
TTAAGATTGTGGGCACAAGAGAATTTGATGGGTACTGTTGAAGAAGCTGAAAGGTACAAT
ACAACTAAGCGCAGAGATTTGTTAATGGGGTTGGGGTTTTGTGGGGTTACAAGTTTTTTG
GTGGGTTCTTGTTATGCTGAAGCAGCTGGATTGCCACCAGAGGAAAAACCAAAGCTTTGT
GATGCTACATGTGAGAAAGAGCTTGAAAATGTTCCTATGGTAACAACTGAGTCAGGCTTG
CAGTATAAGGACATCAAAGTTGGTCGAGGCCCTAGTCCCCCTGTTGGTTTCCAGGTCGCT
GCAAATTATGTTGCCATGGTTCCCTCGGGACAAATTTTTGACAGCTCCCTGGAGAAAGGT
CGACCTTACATTTTCCGTGTAGGTGCTGACCAGGTAGTCAAAGGACTTGATGAAGGGATC
TTGAGCATGAAAGTTGGAGGACTACGTCGACTCTATGTACCTGGATCTTTGGCGTTTCCA
AAAGGCTTGACATCGGCTCCTGGAAGGCCAAGAGTGGCTCCTAACAGCCCAGTGGTATTC
GACGTGAGTTTGGAGTTCATACCAGGCCTTGAATCCGACGACGAGTGA